1 | #!/usr/bin/env python |
---|
2 | """ |
---|
3 | This software was developed by the University of Tennessee as part of the |
---|
4 | Distributed Data Analysis of Neutron Scattering Experiments (DANSE) |
---|
5 | project funded by the US National Science Foundation. |
---|
6 | |
---|
7 | If you use DANSE applications to do scientific research that leads to |
---|
8 | publication, we ask that you acknowledge the use of the software with the |
---|
9 | following sentence: |
---|
10 | |
---|
11 | "This work benefited from DANSE software developed under NSF award DMR-0520547." |
---|
12 | |
---|
13 | copyright 2008, University of Tennessee |
---|
14 | """ |
---|
15 | |
---|
16 | """ Provide functionality for a C extension model |
---|
17 | |
---|
18 | WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY |
---|
19 | DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\prolate.h |
---|
20 | AND RE-RUN THE GENERATOR SCRIPT |
---|
21 | |
---|
22 | """ |
---|
23 | |
---|
24 | from sans.models.BaseComponent import BaseComponent |
---|
25 | from sans_extension.c_models import CProlateModel |
---|
26 | import copy |
---|
27 | |
---|
28 | class ProlateModel(CProlateModel, BaseComponent): |
---|
29 | """ Class that evaluates a ProlateModel model. |
---|
30 | This file was auto-generated from ..\c_extensions\prolate.h. |
---|
31 | Refer to that file and the structure it contains |
---|
32 | for details of the model. |
---|
33 | List of default parameters: |
---|
34 | scale = 1.0 |
---|
35 | major_core = 100.0 [A] |
---|
36 | minor_core = 50.0 [A] |
---|
37 | major_shell = 110.0 [A] |
---|
38 | minor_shell = 60.0 [A] |
---|
39 | contrast = 1e-006 [1/A²] |
---|
40 | sld_solvent = 6.3e-006 [1/A²] |
---|
41 | background = 0.001 [1/cm] |
---|
42 | |
---|
43 | """ |
---|
44 | |
---|
45 | def __init__(self): |
---|
46 | """ Initialization """ |
---|
47 | |
---|
48 | # Initialize BaseComponent first, then sphere |
---|
49 | BaseComponent.__init__(self) |
---|
50 | CProlateModel.__init__(self) |
---|
51 | |
---|
52 | ## Name of the model |
---|
53 | self.name = "ProlateModel" |
---|
54 | ## Model description |
---|
55 | self.description ="""[ProlateCoreShellModel] Calculates the form factor for a prolate |
---|
56 | ellipsoid particle with a core_shell structure. |
---|
57 | The form factor is averaged over all possible |
---|
58 | orientations of the ellipsoid such that P(q) |
---|
59 | = scale*<f^2>/Vol + bkg, where f is the |
---|
60 | single particle scattering amplitude. |
---|
61 | [Parameters]: |
---|
62 | major_core = radius of major_core, |
---|
63 | minor_core = radius of minor_core, |
---|
64 | major_shell = radius of major_shell, |
---|
65 | minor_shell = radius of minor_shell, |
---|
66 | contrast = SLD_core - SLD_shell |
---|
67 | sld_solvent = SLD_solvent |
---|
68 | background = Incoherent bkg |
---|
69 | scale = scale |
---|
70 | Note:It is the users' responsibility to ensure |
---|
71 | that shell radii are larger than core radii.""" |
---|
72 | |
---|
73 | ## Parameter details [units, min, max] |
---|
74 | self.details = {} |
---|
75 | self.details['scale'] = ['', None, None] |
---|
76 | self.details['major_core'] = ['[A]', None, None] |
---|
77 | self.details['minor_core'] = ['[A]', None, None] |
---|
78 | self.details['major_shell'] = ['[A]', None, None] |
---|
79 | self.details['minor_shell'] = ['[A]', None, None] |
---|
80 | self.details['contrast'] = ['[1/A²]', None, None] |
---|
81 | self.details['sld_solvent'] = ['[1/A²]', None, None] |
---|
82 | self.details['background'] = ['[1/cm]', None, None] |
---|
83 | |
---|
84 | ## fittable parameters |
---|
85 | self.fixed=['major_core.width', 'minor_core.width', 'major_shell.width', 'minor_shell.width'] |
---|
86 | |
---|
87 | ## parameters with orientation |
---|
88 | self.orientation_params =[] |
---|
89 | |
---|
90 | def clone(self): |
---|
91 | """ Return a identical copy of self """ |
---|
92 | return self._clone(ProlateModel()) |
---|
93 | |
---|
94 | def run(self, x = 0.0): |
---|
95 | """ Evaluate the model |
---|
96 | @param x: input q, or [q,phi] |
---|
97 | @return: scattering function P(q) |
---|
98 | """ |
---|
99 | |
---|
100 | return CProlateModel.run(self, x) |
---|
101 | |
---|
102 | def runXY(self, x = 0.0): |
---|
103 | """ Evaluate the model in cartesian coordinates |
---|
104 | @param x: input q, or [qx, qy] |
---|
105 | @return: scattering function P(q) |
---|
106 | """ |
---|
107 | |
---|
108 | return CProlateModel.runXY(self, x) |
---|
109 | |
---|
110 | def evalDistribition(self, x = []): |
---|
111 | """ Evaluate the model in cartesian coordinates |
---|
112 | @param x: input q[], or [qx[], qy[]] |
---|
113 | @return: scattering function P(q[]) |
---|
114 | """ |
---|
115 | return CProlateModel.evalDistribition(self, x) |
---|
116 | |
---|
117 | def set_dispersion(self, parameter, dispersion): |
---|
118 | """ |
---|
119 | Set the dispersion object for a model parameter |
---|
120 | @param parameter: name of the parameter [string] |
---|
121 | @dispersion: dispersion object of type DispersionModel |
---|
122 | """ |
---|
123 | return CProlateModel.set_dispersion(self, parameter, dispersion.cdisp) |
---|
124 | |
---|
125 | |
---|
126 | # End of file |
---|