source: sasview/sansmodels/src/sans/models/ParallelepipedModel.py @ 7116b6e0

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Last change on this file since 7116b6e0 was f10063e, checked in by Jae Cho <jhjcho@…>, 14 years ago

Updated the definition of SLD params according to new libigor functions

  • Property mode set to 100644
File size: 5.3 KB
Line 
1#!/usr/bin/env python
2"""
3        This software was developed by the University of Tennessee as part of the
4        Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
5        project funded by the US National Science Foundation.
6
7        If you use DANSE applications to do scientific research that leads to
8        publication, we ask that you acknowledge the use of the software with the
9        following sentence:
10
11        "This work benefited from DANSE software developed under NSF award DMR-0520547."
12
13        copyright 2008, University of Tennessee
14"""
15
16""" Provide functionality for a C extension model
17
18        WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
19                 DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\parallelepiped.h
20                 AND RE-RUN THE GENERATOR SCRIPT
21
22"""
23
24from sans.models.BaseComponent import BaseComponent
25from sans_extension.c_models import CParallelepipedModel
26import copy   
27   
28class ParallelepipedModel(CParallelepipedModel, BaseComponent):
29    """ Class that evaluates a ParallelepipedModel model.
30        This file was auto-generated from ..\c_extensions\parallelepiped.h.
31        Refer to that file and the structure it contains
32        for details of the model.
33        List of default parameters:
34         scale           = 1.0
35         short_a         = 35.0 [A]
36         short_b         = 75.0 [A]
37         long_c          = 400.0 [A]
38         sldPipe         = 6.3e-006 [1/A^(2)]
39         sldSolv         = 1e-006 [1/A^(2)]
40         background      = 0.0 [1/cm]
41         parallel_theta  = 0.0 [rad]
42         parallel_phi    = 0.0 [rad]
43         parallel_psi    = 0.0 [rad]
44
45    """
46       
47    def __init__(self):
48        """ Initialization """
49       
50        # Initialize BaseComponent first, then sphere
51        BaseComponent.__init__(self)
52        CParallelepipedModel.__init__(self)
53       
54        ## Name of the model
55        self.name = "ParallelepipedModel"
56        ## Model description
57        self.description =""" Form factor for a rectangular solid with uniform scattering length density.
58               
59                scale:Scale factor
60                short_a: length of short edge  [A]
61                short_b: length of another short edge [A]
62                long_c: length of long edge  of the parallelepiped [A]
63                sldPipe: Pipe_sld
64                sldSolv: solvent_sld
65                background:Incoherent Background [1/cm]"""
66       
67        ## Parameter details [units, min, max]
68        self.details = {}
69        self.details['scale'] = ['', None, None]
70        self.details['short_a'] = ['[A]', None, None]
71        self.details['short_b'] = ['[A]', None, None]
72        self.details['long_c'] = ['[A]', None, None]
73        self.details['sldPipe'] = ['[1/A^(2)]', None, None]
74        self.details['sldSolv'] = ['[1/A^(2)]', None, None]
75        self.details['background'] = ['[1/cm]', None, None]
76        self.details['parallel_theta'] = ['[rad]', None, None]
77        self.details['parallel_phi'] = ['[rad]', None, None]
78        self.details['parallel_psi'] = ['[rad]', None, None]
79
80        ## fittable parameters
81        self.fixed=['short_a.width', 'short_b.width', 'long_c.width', 'parallel_phi.width', 'parallel_psi.width', 'parallel_theta.width']
82       
83        ## parameters with orientation
84        self.orientation_params =['parallel_phi', 'parallel_psi', 'parallel_theta', 'parallel_phi.width', 'parallel_psi.width', 'parallel_theta.width']
85   
86    def clone(self):
87        """ Return a identical copy of self """
88        return self._clone(ParallelepipedModel())   
89       
90    def __getstate__(self):
91        """ return object state for pickling and copying """
92        model_state = {'params': self.params, 'dispersion': self.dispersion, 'log': self.log}
93       
94        return self.__dict__, model_state
95       
96    def __setstate__(self, state):
97        """ create object from pickled state """
98       
99        self.__dict__, model_state = state
100        self.params = model_state['params']
101        self.dispersion = model_state['dispersion']
102        self.log = model_state['log']
103       
104   
105    def run(self, x = 0.0):
106        """ Evaluate the model
107            @param x: input q, or [q,phi]
108            @return: scattering function P(q)
109        """
110       
111        return CParallelepipedModel.run(self, x)
112   
113    def runXY(self, x = 0.0):
114        """ Evaluate the model in cartesian coordinates
115            @param x: input q, or [qx, qy]
116            @return: scattering function P(q)
117        """
118       
119        return CParallelepipedModel.runXY(self, x)
120       
121    def evalDistribution(self, x = []):
122        """ Evaluate the model in cartesian coordinates
123            @param x: input q[], or [qx[], qy[]]
124            @return: scattering function P(q[])
125        """
126        return CParallelepipedModel.evalDistribution(self, x)
127       
128    def calculate_ER(self):
129        """ Calculate the effective radius for P(q)*S(q)
130            @return: the value of the effective radius
131        """       
132        return CParallelepipedModel.calculate_ER(self)
133       
134    def set_dispersion(self, parameter, dispersion):
135        """
136            Set the dispersion object for a model parameter
137            @param parameter: name of the parameter [string]
138            @dispersion: dispersion object of type DispersionModel
139        """
140        return CParallelepipedModel.set_dispersion(self, parameter, dispersion.cdisp)
141       
142   
143# End of file
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