[8a48713] | 1 | #!/usr/bin/env python |
---|
| 2 | """ |
---|
| 3 | This software was developed by the University of Tennessee as part of the |
---|
| 4 | Distributed Data Analysis of Neutron Scattering Experiments (DANSE) |
---|
| 5 | project funded by the US National Science Foundation. |
---|
| 6 | |
---|
| 7 | If you use DANSE applications to do scientific research that leads to |
---|
| 8 | publication, we ask that you acknowledge the use of the software with the |
---|
| 9 | following sentence: |
---|
| 10 | |
---|
| 11 | "This work benefited from DANSE software developed under NSF award DMR-0520547." |
---|
| 12 | |
---|
| 13 | copyright 2008, University of Tennessee |
---|
| 14 | """ |
---|
| 15 | |
---|
| 16 | """ Provide functionality for a C extension model |
---|
| 17 | |
---|
| 18 | WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY |
---|
| 19 | DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\parallelepiped.h |
---|
| 20 | AND RE-RUN THE GENERATOR SCRIPT |
---|
| 21 | |
---|
| 22 | """ |
---|
| 23 | |
---|
| 24 | from sans.models.BaseComponent import BaseComponent |
---|
| 25 | from sans_extension.c_models import CParallelepipedModel |
---|
| 26 | import copy |
---|
| 27 | |
---|
| 28 | class ParallelepipedModel(CParallelepipedModel, BaseComponent): |
---|
| 29 | """ Class that evaluates a ParallelepipedModel model. |
---|
| 30 | This file was auto-generated from ..\c_extensions\parallelepiped.h. |
---|
| 31 | Refer to that file and the structure it contains |
---|
| 32 | for details of the model. |
---|
| 33 | List of default parameters: |
---|
| 34 | scale = 1.0 |
---|
[2cb89e7] | 35 | short_a = 35.0 [A] |
---|
[8e36cdd] | 36 | short_b = 75.0 [A] |
---|
| 37 | long_c = 400.0 [A] |
---|
[27972c1d] | 38 | contrast = 5.3e-006 [1/A^(2)] |
---|
[8a48713] | 39 | background = 0.0 [1/cm] |
---|
[975ec8e] | 40 | parallel_theta = 0.0 [rad] |
---|
| 41 | parallel_phi = 0.0 [rad] |
---|
| 42 | parallel_psi = 0.0 [rad] |
---|
[8a48713] | 43 | |
---|
| 44 | """ |
---|
| 45 | |
---|
| 46 | def __init__(self): |
---|
| 47 | """ Initialization """ |
---|
| 48 | |
---|
| 49 | # Initialize BaseComponent first, then sphere |
---|
| 50 | BaseComponent.__init__(self) |
---|
| 51 | CParallelepipedModel.__init__(self) |
---|
| 52 | |
---|
| 53 | ## Name of the model |
---|
| 54 | self.name = "ParallelepipedModel" |
---|
| 55 | ## Model description |
---|
[2cb89e7] | 56 | self.description =""" Form factor for a rectangular solid with uniform scattering length density. |
---|
[8a48713] | 57 | |
---|
| 58 | scale:Scale factor |
---|
[8e36cdd] | 59 | short_a: length of short edge [A] |
---|
| 60 | short_b: length of another short edge [A] |
---|
| 61 | long_c: length of long edge of the parallelepiped [A] |
---|
[2cb89e7] | 62 | contrast: particle_sld - solvent_sld |
---|
[8a48713] | 63 | background:Incoherent Background [1/cm]""" |
---|
| 64 | |
---|
| 65 | ## Parameter details [units, min, max] |
---|
| 66 | self.details = {} |
---|
| 67 | self.details['scale'] = ['', None, None] |
---|
[2cb89e7] | 68 | self.details['short_a'] = ['[A]', None, None] |
---|
[8e36cdd] | 69 | self.details['short_b'] = ['[A]', None, None] |
---|
| 70 | self.details['long_c'] = ['[A]', None, None] |
---|
[27972c1d] | 71 | self.details['contrast'] = ['[1/A^(2)]', None, None] |
---|
[8a48713] | 72 | self.details['background'] = ['[1/cm]', None, None] |
---|
| 73 | self.details['parallel_theta'] = ['[rad]', None, None] |
---|
| 74 | self.details['parallel_phi'] = ['[rad]', None, None] |
---|
[975ec8e] | 75 | self.details['parallel_psi'] = ['[rad]', None, None] |
---|
[8a48713] | 76 | |
---|
| 77 | ## fittable parameters |
---|
[8e36cdd] | 78 | self.fixed=['short_a.width', 'short_b.width', 'long_c.width', 'parallel_phi.width', 'parallel_psi.width', 'parallel_theta.width'] |
---|
[8a48713] | 79 | |
---|
| 80 | ## parameters with orientation |
---|
[975ec8e] | 81 | self.orientation_params =['parallel_phi', 'parallel_psi', 'parallel_theta', 'parallel_phi.width', 'parallel_psi.width', 'parallel_theta.width'] |
---|
[8a48713] | 82 | |
---|
| 83 | def clone(self): |
---|
| 84 | """ Return a identical copy of self """ |
---|
| 85 | return self._clone(ParallelepipedModel()) |
---|
| 86 | |
---|
| 87 | def run(self, x = 0.0): |
---|
| 88 | """ Evaluate the model |
---|
| 89 | @param x: input q, or [q,phi] |
---|
| 90 | @return: scattering function P(q) |
---|
| 91 | """ |
---|
| 92 | |
---|
| 93 | return CParallelepipedModel.run(self, x) |
---|
| 94 | |
---|
| 95 | def runXY(self, x = 0.0): |
---|
| 96 | """ Evaluate the model in cartesian coordinates |
---|
| 97 | @param x: input q, or [qx, qy] |
---|
| 98 | @return: scattering function P(q) |
---|
| 99 | """ |
---|
| 100 | |
---|
| 101 | return CParallelepipedModel.runXY(self, x) |
---|
| 102 | |
---|
[9bd69098] | 103 | def evalDistribition(self, x = []): |
---|
| 104 | """ Evaluate the model in cartesian coordinates |
---|
| 105 | @param x: input q[], or [qx[], qy[]] |
---|
| 106 | @return: scattering function P(q[]) |
---|
| 107 | """ |
---|
| 108 | return CParallelepipedModel.evalDistribition(self, x) |
---|
| 109 | |
---|
[5eb9154] | 110 | def calculate_ER(self): |
---|
| 111 | """ Calculate the effective radius for P(q)*S(q) |
---|
| 112 | @return: the value of the effective radius |
---|
| 113 | """ |
---|
| 114 | return CParallelepipedModel.calculate_ER(self) |
---|
| 115 | |
---|
[8a48713] | 116 | def set_dispersion(self, parameter, dispersion): |
---|
| 117 | """ |
---|
| 118 | Set the dispersion object for a model parameter |
---|
| 119 | @param parameter: name of the parameter [string] |
---|
| 120 | @dispersion: dispersion object of type DispersionModel |
---|
| 121 | """ |
---|
| 122 | return CParallelepipedModel.set_dispersion(self, parameter, dispersion.cdisp) |
---|
| 123 | |
---|
| 124 | |
---|
| 125 | # End of file |
---|