source: sasview/sansmodels/src/sans/models/ParallelepipedModel.py @ bdc25e2

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Last change on this file since bdc25e2 was c7a7e1b, checked in by Gervaise Alina <gervyh@…>, 14 years ago

working on model pickle

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[8a48713]1#!/usr/bin/env python
2
[79ac6f8]3##############################################################################
4#       This software was developed by the University of Tennessee as part of the
5#       Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
6#       project funded by the US National Science Foundation.
7#
8#       If you use DANSE applications to do scientific research that leads to
9#       publication, we ask that you acknowledge the use of the software with the
10#       following sentence:
11#
12#       "This work benefited from DANSE software developed under NSF award DMR-0520547."
13#
14#       copyright 2008, University of Tennessee
15##############################################################################
[8a48713]16
17
[79ac6f8]18"""
19Provide functionality for a C extension model
[8a48713]20
[79ac6f8]21:WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
22         DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\parallelepiped.h
23         AND RE-RUN THE GENERATOR SCRIPT
[8a48713]24
25"""
26
27from sans.models.BaseComponent import BaseComponent
28from sans_extension.c_models import CParallelepipedModel
29import copy   
[96656e3]30
31def create_ParallelepipedModel():
32    obj = ParallelepipedModel()
33    #CParallelepipedModel.__init__(obj) is called by ParallelepipedModel constructor
34    return obj
35
[8a48713]36class ParallelepipedModel(CParallelepipedModel, BaseComponent):
[79ac6f8]37    """
38    Class that evaluates a ParallelepipedModel model.
39    This file was auto-generated from ..\c_extensions\parallelepiped.h.
40    Refer to that file and the structure it contains
41    for details of the model.
42    List of default parameters:
[8a48713]43         scale           = 1.0
[2cb89e7]44         short_a         = 35.0 [A]
[8e36cdd]45         short_b         = 75.0 [A]
46         long_c          = 400.0 [A]
[f10063e]47         sldPipe         = 6.3e-006 [1/A^(2)]
48         sldSolv         = 1e-006 [1/A^(2)]
[8a48713]49         background      = 0.0 [1/cm]
[4628e31]50         parallel_theta  = 0.0 [deg]
51         parallel_phi    = 0.0 [deg]
52         parallel_psi    = 0.0 [deg]
[8a48713]53
54    """
55       
56    def __init__(self):
57        """ Initialization """
58       
59        # Initialize BaseComponent first, then sphere
60        BaseComponent.__init__(self)
[96656e3]61        #apply(CParallelepipedModel.__init__, (self,))
[8a48713]62        CParallelepipedModel.__init__(self)
63       
64        ## Name of the model
65        self.name = "ParallelepipedModel"
66        ## Model description
[2cb89e7]67        self.description =""" Form factor for a rectangular solid with uniform scattering length density.
[8a48713]68               
69                scale:Scale factor
[8e36cdd]70                short_a: length of short edge  [A]
71                short_b: length of another short edge [A]
72                long_c: length of long edge  of the parallelepiped [A]
[f10063e]73                sldPipe: Pipe_sld
74                sldSolv: solvent_sld
[8a48713]75                background:Incoherent Background [1/cm]"""
76       
[fe9c19b4]77        ## Parameter details [units, min, max]
[8a48713]78        self.details = {}
79        self.details['scale'] = ['', None, None]
[2cb89e7]80        self.details['short_a'] = ['[A]', None, None]
[8e36cdd]81        self.details['short_b'] = ['[A]', None, None]
82        self.details['long_c'] = ['[A]', None, None]
[f10063e]83        self.details['sldPipe'] = ['[1/A^(2)]', None, None]
84        self.details['sldSolv'] = ['[1/A^(2)]', None, None]
[8a48713]85        self.details['background'] = ['[1/cm]', None, None]
[4628e31]86        self.details['parallel_theta'] = ['[deg]', None, None]
87        self.details['parallel_phi'] = ['[deg]', None, None]
88        self.details['parallel_psi'] = ['[deg]', None, None]
[8a48713]89
[fe9c19b4]90        ## fittable parameters
[8e36cdd]91        self.fixed=['short_a.width', 'short_b.width', 'long_c.width', 'parallel_phi.width', 'parallel_psi.width', 'parallel_theta.width']
[8a48713]92       
[35aface]93        ## non-fittable parameters
[96656e3]94        self.non_fittable = []
[35aface]95       
[8a48713]96        ## parameters with orientation
[96656e3]97        self.orientation_params = ['parallel_phi', 'parallel_psi', 'parallel_theta', 'parallel_phi.width', 'parallel_psi.width', 'parallel_theta.width']
[c7a7e1b]98
99    def __setstate__(self, state):
100        """
101        restore the state of a model from pickle
102        """
103        self.__dict__, self.params, self.dispersion = state
104       
[96656e3]105    def __reduce_ex__(self, proto):
[79ac6f8]106        """
[96656e3]107        Overwrite the __reduce_ex__ of PyTypeObject *type call in the init of
108        c model.
[79ac6f8]109        """
[c7a7e1b]110        state = (self.__dict__, self.params, self.dispersion)
111        return (create_ParallelepipedModel,tuple(), state, None, None)
[fe9c19b4]112       
[96656e3]113    def clone(self):
114        """ Return a identical copy of self """
115        return self._clone(ParallelepipedModel())   
[fe9c19b4]116       
[8a48713]117   
[79ac6f8]118    def run(self, x=0.0):
119        """
120        Evaluate the model
121       
122        :param x: input q, or [q,phi]
123       
124        :return: scattering function P(q)
125       
[8a48713]126        """
127       
128        return CParallelepipedModel.run(self, x)
129   
[79ac6f8]130    def runXY(self, x=0.0):
131        """
132        Evaluate the model in cartesian coordinates
133       
134        :param x: input q, or [qx, qy]
135       
136        :return: scattering function P(q)
137       
[8a48713]138        """
139       
140        return CParallelepipedModel.runXY(self, x)
141       
[79ac6f8]142    def evalDistribution(self, x=[]):
143        """
144        Evaluate the model in cartesian coordinates
145       
146        :param x: input q[], or [qx[], qy[]]
147       
148        :return: scattering function P(q[])
149       
[9bd69098]150        """
[f9a1279]151        return CParallelepipedModel.evalDistribution(self, x)
[9bd69098]152       
[5eb9154]153    def calculate_ER(self):
[79ac6f8]154        """
155        Calculate the effective radius for P(q)*S(q)
156       
157        :return: the value of the effective radius
158       
[5eb9154]159        """       
160        return CParallelepipedModel.calculate_ER(self)
161       
[8a48713]162    def set_dispersion(self, parameter, dispersion):
163        """
[79ac6f8]164        Set the dispersion object for a model parameter
165       
166        :param parameter: name of the parameter [string]
167        :param dispersion: dispersion object of type DispersionModel
168       
[8a48713]169        """
170        return CParallelepipedModel.set_dispersion(self, parameter, dispersion.cdisp)
171       
172   
173# End of file
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