source: sasview/sansmodels/src/sans/models/MultiShellModel.py @ 20905a0

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Last change on this file since 20905a0 was 79ac6f8, checked in by Gervaise Alina <gervyh@…>, 15 years ago

working on documentation

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1#!/usr/bin/env python
2
3##############################################################################
4#       This software was developed by the University of Tennessee as part of the
5#       Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
6#       project funded by the US National Science Foundation.
7#
8#       If you use DANSE applications to do scientific research that leads to
9#       publication, we ask that you acknowledge the use of the software with the
10#       following sentence:
11#
12#       "This work benefited from DANSE software developed under NSF award DMR-0520547."
13#
14#       copyright 2008, University of Tennessee
15##############################################################################
16
17
18"""
19Provide functionality for a C extension model
20
21:WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
22         DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\multishell.h
23         AND RE-RUN THE GENERATOR SCRIPT
24
25"""
26
27from sans.models.BaseComponent import BaseComponent
28from sans_extension.c_models import CMultiShellModel
29import copy   
30   
31class MultiShellModel(CMultiShellModel, BaseComponent):
32    """
33    Class that evaluates a MultiShellModel model.
34    This file was auto-generated from ..\c_extensions\multishell.h.
35    Refer to that file and the structure it contains
36    for details of the model.
37    List of default parameters:
38         scale           = 1.0
39         core_radius     = 60.0 [A]
40         s_thickness     = 10.0 [A]
41         w_thickness     = 10.0 [A]
42         core_sld        = 6.4e-006 [1/A^(2)]
43         shell_sld       = 4e-007 [1/A^(2)]
44         n_pairs         = 2.0
45         background      = 0.0 [1/cm]
46
47    """
48       
49    def __init__(self):
50        """ Initialization """
51       
52        # Initialize BaseComponent first, then sphere
53        BaseComponent.__init__(self)
54        CMultiShellModel.__init__(self)
55       
56        ## Name of the model
57        self.name = "MultiShellModel"
58        ## Model description
59        self.description =""" MultiShell (Sphere) Model (or Multilamellar Vesicles): Model parameters;
60                scale : scale factor
61                core_radius : Core radius of the multishell
62                s_thickness: shell thickness
63                w_thickness: water thickness
64                core_sld: core scattering length density
65                shell_sld: shell scattering length density
66                n_pairs:number of pairs of water/shell
67                background: incoherent background"""
68       
69        ## Parameter details [units, min, max]
70        self.details = {}
71        self.details['scale'] = ['', None, None]
72        self.details['core_radius'] = ['[A]', None, None]
73        self.details['s_thickness'] = ['[A]', None, None]
74        self.details['w_thickness'] = ['[A]', None, None]
75        self.details['core_sld'] = ['[1/A^(2)]', None, None]
76        self.details['shell_sld'] = ['[1/A^(2)]', None, None]
77        self.details['n_pairs'] = ['', None, None]
78        self.details['background'] = ['[1/cm]', None, None]
79
80        ## fittable parameters
81        self.fixed=['core_radius.width', 's_thickness.width', 'w_thickness.width']
82       
83        ## parameters with orientation
84        self.orientation_params =[]
85   
86    def clone(self):
87        """ Return a identical copy of self """
88        return self._clone(MultiShellModel())   
89       
90    def __getstate__(self):
91        """
92        return object state for pickling and copying
93        """
94        model_state = {'params': self.params, 'dispersion': self.dispersion, 'log': self.log}
95       
96        return self.__dict__, model_state
97       
98    def __setstate__(self, state):
99        """
100        create object from pickled state
101       
102        :param state: the state of the current model
103       
104        """
105       
106        self.__dict__, model_state = state
107        self.params = model_state['params']
108        self.dispersion = model_state['dispersion']
109        self.log = model_state['log']
110       
111   
112    def run(self, x=0.0):
113        """
114        Evaluate the model
115       
116        :param x: input q, or [q,phi]
117       
118        :return: scattering function P(q)
119       
120        """
121       
122        return CMultiShellModel.run(self, x)
123   
124    def runXY(self, x=0.0):
125        """
126        Evaluate the model in cartesian coordinates
127       
128        :param x: input q, or [qx, qy]
129       
130        :return: scattering function P(q)
131       
132        """
133       
134        return CMultiShellModel.runXY(self, x)
135       
136    def evalDistribution(self, x=[]):
137        """
138        Evaluate the model in cartesian coordinates
139       
140        :param x: input q[], or [qx[], qy[]]
141       
142        :return: scattering function P(q[])
143       
144        """
145        return CMultiShellModel.evalDistribution(self, x)
146       
147    def calculate_ER(self):
148        """
149        Calculate the effective radius for P(q)*S(q)
150       
151        :return: the value of the effective radius
152       
153        """       
154        return CMultiShellModel.calculate_ER(self)
155       
156    def set_dispersion(self, parameter, dispersion):
157        """
158        Set the dispersion object for a model parameter
159       
160        :param parameter: name of the parameter [string]
161        :param dispersion: dispersion object of type DispersionModel
162       
163        """
164        return CMultiShellModel.set_dispersion(self, parameter, dispersion.cdisp)
165       
166   
167# End of file
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