source: sasview/sansmodels/src/sans/models/MultiShellModel.py @ 5a0d01b3

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Last change on this file since 5a0d01b3 was 96656e3, checked in by Jae Cho <jhjcho@…>, 14 years ago

update models due to changes of template

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[2c4b289]1#!/usr/bin/env python
2
[79ac6f8]3##############################################################################
4#       This software was developed by the University of Tennessee as part of the
5#       Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
6#       project funded by the US National Science Foundation.
7#
8#       If you use DANSE applications to do scientific research that leads to
9#       publication, we ask that you acknowledge the use of the software with the
10#       following sentence:
11#
12#       "This work benefited from DANSE software developed under NSF award DMR-0520547."
13#
14#       copyright 2008, University of Tennessee
15##############################################################################
[2c4b289]16
17
[79ac6f8]18"""
19Provide functionality for a C extension model
[2c4b289]20
[79ac6f8]21:WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
22         DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\multishell.h
23         AND RE-RUN THE GENERATOR SCRIPT
[2c4b289]24
25"""
26
27from sans.models.BaseComponent import BaseComponent
28from sans_extension.c_models import CMultiShellModel
29import copy   
[96656e3]30
31def create_MultiShellModel():
32    obj = MultiShellModel()
33    #CMultiShellModel.__init__(obj) is called by MultiShellModel constructor
34    return obj
35
[2c4b289]36class MultiShellModel(CMultiShellModel, BaseComponent):
[79ac6f8]37    """
38    Class that evaluates a MultiShellModel model.
39    This file was auto-generated from ..\c_extensions\multishell.h.
40    Refer to that file and the structure it contains
41    for details of the model.
42    List of default parameters:
[2c4b289]43         scale           = 1.0
44         core_radius     = 60.0 [A]
45         s_thickness     = 10.0 [A]
46         w_thickness     = 10.0 [A]
[27972c1d]47         core_sld        = 6.4e-006 [1/A^(2)]
48         shell_sld       = 4e-007 [1/A^(2)]
[2c4b289]49         n_pairs         = 2.0
50         background      = 0.0 [1/cm]
51
52    """
53       
54    def __init__(self):
55        """ Initialization """
56       
57        # Initialize BaseComponent first, then sphere
58        BaseComponent.__init__(self)
[96656e3]59        #apply(CMultiShellModel.__init__, (self,))
[2c4b289]60        CMultiShellModel.__init__(self)
61       
62        ## Name of the model
63        self.name = "MultiShellModel"
64        ## Model description
[5eb9154]65        self.description =""" MultiShell (Sphere) Model (or Multilamellar Vesicles): Model parameters;
[2c4b289]66                scale : scale factor
67                core_radius : Core radius of the multishell
68                s_thickness: shell thickness
69                w_thickness: water thickness
70                core_sld: core scattering length density
71                shell_sld: shell scattering length density
72                n_pairs:number of pairs of water/shell
73                background: incoherent background"""
74       
[fe9c19b4]75        ## Parameter details [units, min, max]
[2c4b289]76        self.details = {}
77        self.details['scale'] = ['', None, None]
78        self.details['core_radius'] = ['[A]', None, None]
79        self.details['s_thickness'] = ['[A]', None, None]
80        self.details['w_thickness'] = ['[A]', None, None]
[27972c1d]81        self.details['core_sld'] = ['[1/A^(2)]', None, None]
82        self.details['shell_sld'] = ['[1/A^(2)]', None, None]
[2c4b289]83        self.details['n_pairs'] = ['', None, None]
84        self.details['background'] = ['[1/cm]', None, None]
85
[fe9c19b4]86        ## fittable parameters
[2cc633b]87        self.fixed=['core_radius.width', 's_thickness.width', 'w_thickness.width']
[2c4b289]88       
[35aface]89        ## non-fittable parameters
[96656e3]90        self.non_fittable = []
[35aface]91       
[2c4b289]92        ## parameters with orientation
[96656e3]93        self.orientation_params = []
[2c4b289]94   
[96656e3]95    def __reduce_ex__(self, proto):
[79ac6f8]96        """
[96656e3]97        Overwrite the __reduce_ex__ of PyTypeObject *type call in the init of
98        c model.
[79ac6f8]99        """
[96656e3]100        return (create_MultiShellModel,tuple())
[fe9c19b4]101       
[96656e3]102    def clone(self):
103        """ Return a identical copy of self """
104        return self._clone(MultiShellModel())   
[fe9c19b4]105       
[2c4b289]106   
[79ac6f8]107    def run(self, x=0.0):
108        """
109        Evaluate the model
110       
111        :param x: input q, or [q,phi]
112       
113        :return: scattering function P(q)
114       
[2c4b289]115        """
116       
117        return CMultiShellModel.run(self, x)
118   
[79ac6f8]119    def runXY(self, x=0.0):
120        """
121        Evaluate the model in cartesian coordinates
122       
123        :param x: input q, or [qx, qy]
124       
125        :return: scattering function P(q)
126       
[2c4b289]127        """
128       
129        return CMultiShellModel.runXY(self, x)
130       
[79ac6f8]131    def evalDistribution(self, x=[]):
132        """
133        Evaluate the model in cartesian coordinates
134       
135        :param x: input q[], or [qx[], qy[]]
136       
137        :return: scattering function P(q[])
138       
[9bd69098]139        """
[f9a1279]140        return CMultiShellModel.evalDistribution(self, x)
[9bd69098]141       
[5eb9154]142    def calculate_ER(self):
[79ac6f8]143        """
144        Calculate the effective radius for P(q)*S(q)
145       
146        :return: the value of the effective radius
147       
[5eb9154]148        """       
149        return CMultiShellModel.calculate_ER(self)
150       
[2c4b289]151    def set_dispersion(self, parameter, dispersion):
152        """
[79ac6f8]153        Set the dispersion object for a model parameter
154       
155        :param parameter: name of the parameter [string]
156        :param dispersion: dispersion object of type DispersionModel
157       
[2c4b289]158        """
159        return CMultiShellModel.set_dispersion(self, parameter, dispersion.cdisp)
160       
161   
162# End of file
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