source: sasview/sansmodels/src/sans/models/LamellarPSModel.py @ eddff027

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Last change on this file since eddff027 was 9bd69098, checked in by Jae Cho <jhjcho@…>, 15 years ago

recompiled all due to Alina's new eval(run) function

  • Property mode set to 100644
File size: 4.5 KB
Line 
1#!/usr/bin/env python
2"""
3        This software was developed by the University of Tennessee as part of the
4        Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
5        project funded by the US National Science Foundation.
6
7        If you use DANSE applications to do scientific research that leads to
8        publication, we ask that you acknowledge the use of the software with the
9        following sentence:
10
11        "This work benefited from DANSE software developed under NSF award DMR-0520547."
12
13        copyright 2008, University of Tennessee
14"""
15
16""" Provide functionality for a C extension model
17
18        WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
19                 DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\lamellarPS.h
20                 AND RE-RUN THE GENERATOR SCRIPT
21
22"""
23
24from sans.models.BaseComponent import BaseComponent
25from sans_extension.c_models import CLamellarPSModel
26import copy   
27   
28class LamellarPSModel(CLamellarPSModel, BaseComponent):
29    """ Class that evaluates a LamellarPSModel model.
30        This file was auto-generated from ..\c_extensions\lamellarPS.h.
31        Refer to that file and the structure it contains
32        for details of the model.
33        List of default parameters:
34         scale           = 1.0
35         spacing         = 400.0 [A]
36         delta           = 30.0 [A]
37         sigma           = 0.15
38         contrast        = 5.3e-006 [1/A²]
39         n_plates        = 20.0
40         caille          = 0.1
41         background      = 0.0 [1/cm]
42
43    """
44       
45    def __init__(self):
46        """ Initialization """
47       
48        # Initialize BaseComponent first, then sphere
49        BaseComponent.__init__(self)
50        CLamellarPSModel.__init__(self)
51       
52        ## Name of the model
53        self.name = "LamellarPSModel"
54        ## Model description
55        self.description ="""[Concentrated Lamellar Form Factor] Calculates the scattered
56                intensity from a lyotropic lamellar phase.
57                The intensity (form factor and structure
58                factor)calculated is for lamellae of
59                uniform scattering length density that
60                are randomly distributed in solution
61                (a powder average). The lamellae thickness
62                is polydisperse. The model can also
63                be applied to large, multi-lamellar vesicles.
64                No resolution smeared version is included
65                in the structure factor of this model.
66                *Parameters: spacing = repeat spacing,
67                delta = bilayer thickness,
68                sigma = variation in bilayer thickness
69                contrast = SLD_solvent - SLD_bilayer
70                n_plate = # of Lamellar plates
71                caille = Caille parameter (<0.8 or <1)
72                background = incoherent bgd
73                scale = scale factor"""
74       
75                ## Parameter details [units, min, max]
76        self.details = {}
77        self.details['scale'] = ['', None, None]
78        self.details['spacing'] = ['[A]', None, None]
79        self.details['delta'] = ['[A]', None, None]
80        self.details['sigma'] = ['', None, None]
81        self.details['contrast'] = ['[1/A²]', None, None]
82        self.details['n_plates'] = ['', None, None]
83        self.details['caille'] = ['', None, None]
84        self.details['background'] = ['[1/cm]', None, None]
85
86                ## fittable parameters
87        self.fixed=['spacing.width']
88       
89        ## parameters with orientation
90        self.orientation_params =[]
91   
92    def clone(self):
93        """ Return a identical copy of self """
94        return self._clone(LamellarPSModel())   
95   
96    def run(self, x = 0.0):
97        """ Evaluate the model
98            @param x: input q, or [q,phi]
99            @return: scattering function P(q)
100        """
101       
102        return CLamellarPSModel.run(self, x)
103   
104    def runXY(self, x = 0.0):
105        """ Evaluate the model in cartesian coordinates
106            @param x: input q, or [qx, qy]
107            @return: scattering function P(q)
108        """
109       
110        return CLamellarPSModel.runXY(self, x)
111       
112    def evalDistribition(self, x = []):
113        """ Evaluate the model in cartesian coordinates
114            @param x: input q[], or [qx[], qy[]]
115            @return: scattering function P(q[])
116        """
117        return CLamellarPSModel.evalDistribition(self, x)
118       
119    def set_dispersion(self, parameter, dispersion):
120        """
121            Set the dispersion object for a model parameter
122            @param parameter: name of the parameter [string]
123            @dispersion: dispersion object of type DispersionModel
124        """
125        return CLamellarPSModel.set_dispersion(self, parameter, dispersion.cdisp)
126       
127   
128# End of file
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