source: sasview/sansmodels/src/sans/models/LamellarPCrystalModel.py @ 9f391af

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Last change on this file since 9f391af was 96656e3, checked in by Jae Cho <jhjcho@…>, 14 years ago

update models due to changes of template

  • Property mode set to 100644
File size: 5.3 KB
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1#!/usr/bin/env python
2
3##############################################################################
4#       This software was developed by the University of Tennessee as part of the
5#       Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
6#       project funded by the US National Science Foundation.
7#
8#       If you use DANSE applications to do scientific research that leads to
9#       publication, we ask that you acknowledge the use of the software with the
10#       following sentence:
11#
12#       "This work benefited from DANSE software developed under NSF award DMR-0520547."
13#
14#       copyright 2008, University of Tennessee
15##############################################################################
16
17
18"""
19Provide functionality for a C extension model
20
21:WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
22         DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\lamellarPC.h
23         AND RE-RUN THE GENERATOR SCRIPT
24
25"""
26
27from sans.models.BaseComponent import BaseComponent
28from sans_extension.c_models import CLamellarPCrystalModel
29import copy   
30
31def create_LamellarPCrystalModel():
32    obj = LamellarPCrystalModel()
33    #CLamellarPCrystalModel.__init__(obj) is called by LamellarPCrystalModel constructor
34    return obj
35
36class LamellarPCrystalModel(CLamellarPCrystalModel, BaseComponent):
37    """
38    Class that evaluates a LamellarPCrystalModel model.
39    This file was auto-generated from ..\c_extensions\lamellarPC.h.
40    Refer to that file and the structure it contains
41    for details of the model.
42    List of default parameters:
43         scale           = 1.0
44         thickness       = 33.0 [A]
45         Nlayers         = 20.0
46         spacing         = 250.0 [A]
47         pd_spacing      = 0.0
48         sld_layer       = 1e-006 [1/A^(2)]
49         sld_solvent     = 6.34e-006 [1/A^(2)]
50         background      = 0.0 [1/cm]
51
52    """
53       
54    def __init__(self):
55        """ Initialization """
56       
57        # Initialize BaseComponent first, then sphere
58        BaseComponent.__init__(self)
59        #apply(CLamellarPCrystalModel.__init__, (self,))
60        CLamellarPCrystalModel.__init__(self)
61       
62        ## Name of the model
63        self.name = "LamellarPCrystalModel"
64        ## Model description
65        self.description ="""[Lamellar ParaCrystal Model] Parameter Definitions: scale = scale factor,
66                background = incoherent background
67                thickness = lamellar thickness,
68                sld_layer = layer scattering length density ,
69                sld_solvent = solvent scattering length density.
70                Nlayers = no. of lamellar layers
71                spacing = spacing between layers
72                pd_spacing = polydispersity of spacing
73                Note: This model can be used for large
74                multilamellar vesicles.
75                """
76       
77        ## Parameter details [units, min, max]
78        self.details = {}
79        self.details['scale'] = ['', None, None]
80        self.details['thickness'] = ['[A]', None, None]
81        self.details['Nlayers'] = ['', None, None]
82        self.details['spacing'] = ['[A]', None, None]
83        self.details['pd_spacing'] = ['', None, None]
84        self.details['sld_layer'] = ['[1/A^(2)]', None, None]
85        self.details['sld_solvent'] = ['[1/A^(2)]', None, None]
86        self.details['background'] = ['[1/cm]', None, None]
87
88        ## fittable parameters
89        self.fixed=['thickness.width']
90       
91        ## non-fittable parameters
92        self.non_fittable = []
93       
94        ## parameters with orientation
95        self.orientation_params = []
96   
97    def __reduce_ex__(self, proto):
98        """
99        Overwrite the __reduce_ex__ of PyTypeObject *type call in the init of
100        c model.
101        """
102        return (create_LamellarPCrystalModel,tuple())
103       
104    def clone(self):
105        """ Return a identical copy of self """
106        return self._clone(LamellarPCrystalModel())   
107       
108   
109    def run(self, x=0.0):
110        """
111        Evaluate the model
112       
113        :param x: input q, or [q,phi]
114       
115        :return: scattering function P(q)
116       
117        """
118       
119        return CLamellarPCrystalModel.run(self, x)
120   
121    def runXY(self, x=0.0):
122        """
123        Evaluate the model in cartesian coordinates
124       
125        :param x: input q, or [qx, qy]
126       
127        :return: scattering function P(q)
128       
129        """
130       
131        return CLamellarPCrystalModel.runXY(self, x)
132       
133    def evalDistribution(self, x=[]):
134        """
135        Evaluate the model in cartesian coordinates
136       
137        :param x: input q[], or [qx[], qy[]]
138       
139        :return: scattering function P(q[])
140       
141        """
142        return CLamellarPCrystalModel.evalDistribution(self, x)
143       
144    def calculate_ER(self):
145        """
146        Calculate the effective radius for P(q)*S(q)
147       
148        :return: the value of the effective radius
149       
150        """       
151        return CLamellarPCrystalModel.calculate_ER(self)
152       
153    def set_dispersion(self, parameter, dispersion):
154        """
155        Set the dispersion object for a model parameter
156       
157        :param parameter: name of the parameter [string]
158        :param dispersion: dispersion object of type DispersionModel
159       
160        """
161        return CLamellarPCrystalModel.set_dispersion(self, parameter, dispersion.cdisp)
162       
163   
164# End of file
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