source: sasview/sansmodels/src/sans/models/LamellarFFHGModel.py @ c451be9

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Last change on this file since c451be9 was c451be9, checked in by Jae Cho <jhjcho@…>, 15 years ago

corrections on the definition of polydispersity as suggested by steve K: should be normalized by average volume

  • Property mode set to 100644
File size: 4.8 KB
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1#!/usr/bin/env python
2"""
3        This software was developed by the University of Tennessee as part of the
4        Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
5        project funded by the US National Science Foundation.
6
7        If you use DANSE applications to do scientific research that leads to
8        publication, we ask that you acknowledge the use of the software with the
9        following sentence:
10
11        "This work benefited from DANSE software developed under NSF award DMR-0520547."
12
13        copyright 2008, University of Tennessee
14"""
15
16""" Provide functionality for a C extension model
17
18        WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
19                 DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\lamellarFF_HG.h
20                 AND RE-RUN THE GENERATOR SCRIPT
21
22"""
23
24from sans.models.BaseComponent import BaseComponent
25from sans_extension.c_models import CLamellarFFHGModel
26import copy   
27   
28class LamellarFFHGModel(CLamellarFFHGModel, BaseComponent):
29    """ Class that evaluates a LamellarFFHGModel model.
30        This file was auto-generated from ..\c_extensions\lamellarFF_HG.h.
31        Refer to that file and the structure it contains
32        for details of the model.
33        List of default parameters:
34         scale           = 1.0
35         t_length        = 15.0 [A]
36         h_thickness     = 10.0 [A]
37         sld_tail        = 4e-007 [1/A^(2)]
38         sld_head        = 3e-006 [1/A^(2)]
39         sld_solvent     = 6e-006 [1/A^(2)]
40         background      = 0.0 [1/cm]
41
42    """
43       
44    def __init__(self):
45        """ Initialization """
46       
47        # Initialize BaseComponent first, then sphere
48        BaseComponent.__init__(self)
49        CLamellarFFHGModel.__init__(self)
50       
51        ## Name of the model
52        self.name = "LamellarFFHGModel"
53        ## Model description
54        self.description =""" Parameters: t_length = tail length, h_thickness = head thickness,
55                scale = Scale factor,
56                background = incoherent Background
57                sld_tail = tail scattering length density ,
58                sld_solvent = solvent scattering length density.
59                NOTE: The total bilayer thickness
60                = 2(h_thickness+ t_length).
61                """
62       
63        ## Parameter details [units, min, max]
64        self.details = {}
65        self.details['scale'] = ['', None, None]
66        self.details['t_length'] = ['[A]', None, None]
67        self.details['h_thickness'] = ['[A]', None, None]
68        self.details['sld_tail'] = ['[1/A^(2)]', None, None]
69        self.details['sld_head'] = ['[1/A^(2)]', None, None]
70        self.details['sld_solvent'] = ['[1/A^(2)]', None, None]
71        self.details['background'] = ['[1/cm]', None, None]
72
73        ## fittable parameters
74        self.fixed=['t_length.width', 'h_thickness.width']
75       
76        ## parameters with orientation
77        self.orientation_params =[]
78   
79    def clone(self):
80        """ Return a identical copy of self """
81        return self._clone(LamellarFFHGModel())   
82       
83    def __getstate__(self):
84        """ return object state for pickling and copying """
85        model_state = {'params': self.params, 'dispersion': self.dispersion, 'log': self.log}
86       
87        return self.__dict__, model_state
88       
89    def __setstate__(self, state):
90        """ create object from pickled state """
91       
92        self.__dict__, model_state = state
93        self.params = model_state['params']
94        self.dispersion = model_state['dispersion']
95        self.log = model_state['log']
96       
97   
98    def run(self, x = 0.0):
99        """ Evaluate the model
100            @param x: input q, or [q,phi]
101            @return: scattering function P(q)
102        """
103       
104        return CLamellarFFHGModel.run(self, x)
105   
106    def runXY(self, x = 0.0):
107        """ Evaluate the model in cartesian coordinates
108            @param x: input q, or [qx, qy]
109            @return: scattering function P(q)
110        """
111       
112        return CLamellarFFHGModel.runXY(self, x)
113       
114    def evalDistribition(self, x = []):
115        """ Evaluate the model in cartesian coordinates
116            @param x: input q[], or [qx[], qy[]]
117            @return: scattering function P(q[])
118        """
119        return CLamellarFFHGModel.evalDistribition(self, x)
120       
121    def calculate_ER(self):
122        """ Calculate the effective radius for P(q)*S(q)
123            @return: the value of the effective radius
124        """       
125        return CLamellarFFHGModel.calculate_ER(self)
126       
127    def set_dispersion(self, parameter, dispersion):
128        """
129            Set the dispersion object for a model parameter
130            @param parameter: name of the parameter [string]
131            @dispersion: dispersion object of type DispersionModel
132        """
133        return CLamellarFFHGModel.set_dispersion(self, parameter, dispersion.cdisp)
134       
135   
136# End of file
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