source: sasview/sansmodels/src/sans/models/HollowCylinderModel.py @ f10063e

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Last change on this file since f10063e was f10063e, checked in by Jae Cho <jhjcho@…>, 14 years ago

Updated the definition of SLD params according to new libigor functions

  • Property mode set to 100644
File size: 5.1 KB
Line 
1#!/usr/bin/env python
2"""
3        This software was developed by the University of Tennessee as part of the
4        Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
5        project funded by the US National Science Foundation.
6
7        If you use DANSE applications to do scientific research that leads to
8        publication, we ask that you acknowledge the use of the software with the
9        following sentence:
10
11        "This work benefited from DANSE software developed under NSF award DMR-0520547."
12
13        copyright 2008, University of Tennessee
14"""
15
16""" Provide functionality for a C extension model
17
18        WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
19                 DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\hollow_cylinder.h
20                 AND RE-RUN THE GENERATOR SCRIPT
21
22"""
23
24from sans.models.BaseComponent import BaseComponent
25from sans_extension.c_models import CHollowCylinderModel
26import copy   
27   
28class HollowCylinderModel(CHollowCylinderModel, BaseComponent):
29    """ Class that evaluates a HollowCylinderModel model.
30        This file was auto-generated from ..\c_extensions\hollow_cylinder.h.
31        Refer to that file and the structure it contains
32        for details of the model.
33        List of default parameters:
34         scale           = 1.0
35         core_radius     = 20.0 [A]
36         radius          = 30.0 [A]
37         length          = 400.0 [A]
38         sldCyl          = 6.3e-006 [1/A^(2)]
39         sldSolv         = 1e-006 [1/A^(2)]
40         background      = 0.01 [1/cm]
41         axis_theta      = 1.57 [rad]
42         axis_phi        = 0.0 [rad]
43
44    """
45       
46    def __init__(self):
47        """ Initialization """
48       
49        # Initialize BaseComponent first, then sphere
50        BaseComponent.__init__(self)
51        CHollowCylinderModel.__init__(self)
52       
53        ## Name of the model
54        self.name = "HollowCylinderModel"
55        ## Model description
56        self.description =""" P(q) = scale*<f*f>/Vol + bkg, where f is the scattering amplitude.
57                core_radius = the radius of core
58                radius = the radius of shell
59                length = the total length of the cylinder
60                sldCyl = SLD of the shell
61                sldSolv = SLD of the solvent
62                background = incoherent background"""
63       
64        ## Parameter details [units, min, max]
65        self.details = {}
66        self.details['scale'] = ['', None, None]
67        self.details['core_radius'] = ['[A]', None, None]
68        self.details['radius'] = ['[A]', None, None]
69        self.details['length'] = ['[A]', None, None]
70        self.details['sldCyl'] = ['[1/A^(2)]', None, None]
71        self.details['sldSolv'] = ['[1/A^(2)]', None, None]
72        self.details['background'] = ['[1/cm]', None, None]
73        self.details['axis_theta'] = ['[rad]', None, None]
74        self.details['axis_phi'] = ['[rad]', None, None]
75
76        ## fittable parameters
77        self.fixed=['axis_phi.width', 'axis_theta.width', 'length.width', 'core_radius.width', 'radius']
78       
79        ## parameters with orientation
80        self.orientation_params =['axis_phi', 'axis_theta', 'axis_phi.width', 'axis_theta.width']
81   
82    def clone(self):
83        """ Return a identical copy of self """
84        return self._clone(HollowCylinderModel())   
85       
86    def __getstate__(self):
87        """ return object state for pickling and copying """
88        model_state = {'params': self.params, 'dispersion': self.dispersion, 'log': self.log}
89       
90        return self.__dict__, model_state
91       
92    def __setstate__(self, state):
93        """ create object from pickled state """
94       
95        self.__dict__, model_state = state
96        self.params = model_state['params']
97        self.dispersion = model_state['dispersion']
98        self.log = model_state['log']
99       
100   
101    def run(self, x = 0.0):
102        """ Evaluate the model
103            @param x: input q, or [q,phi]
104            @return: scattering function P(q)
105        """
106       
107        return CHollowCylinderModel.run(self, x)
108   
109    def runXY(self, x = 0.0):
110        """ Evaluate the model in cartesian coordinates
111            @param x: input q, or [qx, qy]
112            @return: scattering function P(q)
113        """
114       
115        return CHollowCylinderModel.runXY(self, x)
116       
117    def evalDistribution(self, x = []):
118        """ Evaluate the model in cartesian coordinates
119            @param x: input q[], or [qx[], qy[]]
120            @return: scattering function P(q[])
121        """
122        return CHollowCylinderModel.evalDistribution(self, x)
123       
124    def calculate_ER(self):
125        """ Calculate the effective radius for P(q)*S(q)
126            @return: the value of the effective radius
127        """       
128        return CHollowCylinderModel.calculate_ER(self)
129       
130    def set_dispersion(self, parameter, dispersion):
131        """
132            Set the dispersion object for a model parameter
133            @param parameter: name of the parameter [string]
134            @dispersion: dispersion object of type DispersionModel
135        """
136        return CHollowCylinderModel.set_dispersion(self, parameter, dispersion.cdisp)
137       
138   
139# End of file
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