source: sasview/sansmodels/src/sans/models/FuzzySphereModel.py @ a24f530

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Last change on this file since a24f530 was b1c3295, checked in by Mathieu Doucet <doucetm@…>, 13 years ago

Re #4 This should clean up a whole bunch of C++ warnings.

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File size: 5.3 KB
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[ec658c85]1#!/usr/bin/env python
2
[79ac6f8]3##############################################################################
4#       This software was developed by the University of Tennessee as part of the
5#       Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
6#       project funded by the US National Science Foundation.
7#
8#       If you use DANSE applications to do scientific research that leads to
9#       publication, we ask that you acknowledge the use of the software with the
10#       following sentence:
11#
12#       "This work benefited from DANSE software developed under NSF award DMR-0520547."
13#
14#       copyright 2008, University of Tennessee
15##############################################################################
[ec658c85]16
17
[79ac6f8]18"""
19Provide functionality for a C extension model
[ec658c85]20
[79ac6f8]21:WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
[b1c3295]22         DO NOT MODIFY THIS FILE, MODIFY ../c_extensions/fuzzysphere.h
[79ac6f8]23         AND RE-RUN THE GENERATOR SCRIPT
[ec658c85]24
25"""
26
27from sans.models.BaseComponent import BaseComponent
[92df66f8]28from sans.models.sans_extension.c_models import CFuzzySphereModel
[ec658c85]29import copy   
[96656e3]30
31def create_FuzzySphereModel():
32    obj = FuzzySphereModel()
33    #CFuzzySphereModel.__init__(obj) is called by FuzzySphereModel constructor
34    return obj
35
[ec658c85]36class FuzzySphereModel(CFuzzySphereModel, BaseComponent):
[79ac6f8]37    """
38    Class that evaluates a FuzzySphereModel model.
[b1c3295]39    This file was auto-generated from ../c_extensions/fuzzysphere.h.
[79ac6f8]40    Refer to that file and the structure it contains
41    for details of the model.
[b1c3295]42    List of default parameters:
43         scale           = 0.01
44         radius          = 60.0 [A]
45         fuzziness       = 10.0 [A]
46         sldSph          = 1e-06 [1/A^(2)]
47         sldSolv         = 3e-06 [1/A^(2)]
48         background      = 0.001 [1/cm]
[ec658c85]49
50    """
51       
52    def __init__(self):
53        """ Initialization """
54       
55        # Initialize BaseComponent first, then sphere
56        BaseComponent.__init__(self)
[96656e3]57        #apply(CFuzzySphereModel.__init__, (self,))
[ec658c85]58        CFuzzySphereModel.__init__(self)
59       
60        ## Name of the model
61        self.name = "FuzzySphereModel"
62        ## Model description
[b1c3295]63        self.description ="""
64                scale: scale factor times volume fraction,
65                or just volume fraction for absolute scale data
66                radius: radius of the solid sphere
67                fuzziness = the STD of the height of fuzzy interfacial
68                thickness (ie., so-called interfacial roughness)
69                sldSph: the SLD of the sphere
70                sldSolv: the SLD of the solvent
71                background: incoherent background
[ec658c85]72                Note: By definition, this function works only when fuzziness << radius."""
73       
[b1c3295]74        ## Parameter details [units, min, max]
75        self.details = {}
76        self.details['scale'] = ['', None, None]
77        self.details['radius'] = ['[A]', None, None]
78        self.details['fuzziness'] = ['[A]', None, None]
79        self.details['sldSph'] = ['[1/A^(2)]', None, None]
80        self.details['sldSolv'] = ['[1/A^(2)]', None, None]
81        self.details['background'] = ['[1/cm]', None, None]
[ec658c85]82
83        ## fittable parameters
84        self.fixed=['radius.width', 'fuzziness.width']
85       
[35aface]86        ## non-fittable parameters
[96656e3]87        self.non_fittable = []
[35aface]88       
[ec658c85]89        ## parameters with orientation
[96656e3]90        self.orientation_params = []
[c7a7e1b]91
92    def __setstate__(self, state):
93        """
94        restore the state of a model from pickle
95        """
96        self.__dict__, self.params, self.dispersion = state
97       
[96656e3]98    def __reduce_ex__(self, proto):
[79ac6f8]99        """
[96656e3]100        Overwrite the __reduce_ex__ of PyTypeObject *type call in the init of
101        c model.
[79ac6f8]102        """
[c7a7e1b]103        state = (self.__dict__, self.params, self.dispersion)
104        return (create_FuzzySphereModel,tuple(), state, None, None)
[ec658c85]105       
[96656e3]106    def clone(self):
107        """ Return a identical copy of self """
108        return self._clone(FuzzySphereModel())   
[ec658c85]109       
110   
[79ac6f8]111    def run(self, x=0.0):
112        """
113        Evaluate the model
114       
115        :param x: input q, or [q,phi]
116       
117        :return: scattering function P(q)
118       
[ec658c85]119        """
120       
121        return CFuzzySphereModel.run(self, x)
122   
[79ac6f8]123    def runXY(self, x=0.0):
124        """
125        Evaluate the model in cartesian coordinates
126       
127        :param x: input q, or [qx, qy]
128       
129        :return: scattering function P(q)
130       
[ec658c85]131        """
132       
133        return CFuzzySphereModel.runXY(self, x)
134       
[79ac6f8]135    def evalDistribution(self, x=[]):
136        """
137        Evaluate the model in cartesian coordinates
138       
139        :param x: input q[], or [qx[], qy[]]
140       
141        :return: scattering function P(q[])
142       
[ec658c85]143        """
144        return CFuzzySphereModel.evalDistribution(self, x)
145       
146    def calculate_ER(self):
[79ac6f8]147        """
148        Calculate the effective radius for P(q)*S(q)
149       
150        :return: the value of the effective radius
151       
[ec658c85]152        """       
153        return CFuzzySphereModel.calculate_ER(self)
154       
155    def set_dispersion(self, parameter, dispersion):
156        """
[79ac6f8]157        Set the dispersion object for a model parameter
158       
159        :param parameter: name of the parameter [string]
160        :param dispersion: dispersion object of type DispersionModel
161       
[ec658c85]162        """
163        return CFuzzySphereModel.set_dispersion(self, parameter, dispersion.cdisp)
164       
165   
[b1c3295]166# End of file
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