source: sasview/sansmodels/src/sans/models/FuzzySphereModel.py @ 1aaa579

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Last change on this file since 1aaa579 was 35aface, checked in by Jae Cho <jhjcho@…>, 14 years ago

addede new models and attr. non_fittable

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File size: 5.3 KB
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[ec658c85]1#!/usr/bin/env python
2
[79ac6f8]3##############################################################################
4#       This software was developed by the University of Tennessee as part of the
5#       Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
6#       project funded by the US National Science Foundation.
7#
8#       If you use DANSE applications to do scientific research that leads to
9#       publication, we ask that you acknowledge the use of the software with the
10#       following sentence:
11#
12#       "This work benefited from DANSE software developed under NSF award DMR-0520547."
13#
14#       copyright 2008, University of Tennessee
15##############################################################################
[ec658c85]16
17
[79ac6f8]18"""
19Provide functionality for a C extension model
[ec658c85]20
[79ac6f8]21:WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
22         DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\fuzzysphere.h
23         AND RE-RUN THE GENERATOR SCRIPT
[ec658c85]24
25"""
26
27from sans.models.BaseComponent import BaseComponent
28from sans_extension.c_models import CFuzzySphereModel
29import copy   
30   
31class FuzzySphereModel(CFuzzySphereModel, BaseComponent):
[79ac6f8]32    """
33    Class that evaluates a FuzzySphereModel model.
34    This file was auto-generated from ..\c_extensions\fuzzysphere.h.
35    Refer to that file and the structure it contains
36    for details of the model.
37    List of default parameters:
[ec658c85]38         scale           = 0.01
39         radius          = 60.0 [A]
40         fuzziness       = 10.0 [A]
41         sldSph          = 1e-006 [1/A^(2)]
42         sldSolv         = 3e-006 [1/A^(2)]
43         background      = 0.001 [1/cm]
44
45    """
46       
47    def __init__(self):
48        """ Initialization """
49       
50        # Initialize BaseComponent first, then sphere
51        BaseComponent.__init__(self)
52        CFuzzySphereModel.__init__(self)
53       
54        ## Name of the model
55        self.name = "FuzzySphereModel"
56        ## Model description
57        self.description ="""
58                scale: scale factor times volume fraction,
59                or just volume fraction for absolute scale data
60                radius: radius of the solid sphere
61                fuzziness = the STD of the height of fuzzy interfacial
62                thickness (ie., so-called interfacial roughness)
63                sldSph: the SLD of the sphere
64                sldSolv: the SLD of the solvent
65                background: incoherent background
66                Note: By definition, this function works only when fuzziness << radius."""
67       
68        ## Parameter details [units, min, max]
69        self.details = {}
70        self.details['scale'] = ['', None, None]
71        self.details['radius'] = ['[A]', None, None]
72        self.details['fuzziness'] = ['[A]', None, None]
73        self.details['sldSph'] = ['[1/A^(2)]', None, None]
74        self.details['sldSolv'] = ['[1/A^(2)]', None, None]
75        self.details['background'] = ['[1/cm]', None, None]
76
77        ## fittable parameters
78        self.fixed=['radius.width', 'fuzziness.width']
79       
[35aface]80        ## non-fittable parameters
81        self.non_fittable=[]
82       
[ec658c85]83        ## parameters with orientation
84        self.orientation_params =[]
85   
86    def clone(self):
87        """ Return a identical copy of self """
88        return self._clone(FuzzySphereModel())   
89       
90    def __getstate__(self):
[79ac6f8]91        """
92        return object state for pickling and copying
93        """
[ec658c85]94        model_state = {'params': self.params, 'dispersion': self.dispersion, 'log': self.log}
95       
96        return self.__dict__, model_state
97       
98    def __setstate__(self, state):
[79ac6f8]99        """
100        create object from pickled state
101       
102        :param state: the state of the current model
103       
104        """
[ec658c85]105       
106        self.__dict__, model_state = state
107        self.params = model_state['params']
108        self.dispersion = model_state['dispersion']
109        self.log = model_state['log']
110       
111   
[79ac6f8]112    def run(self, x=0.0):
113        """
114        Evaluate the model
115       
116        :param x: input q, or [q,phi]
117       
118        :return: scattering function P(q)
119       
[ec658c85]120        """
121       
122        return CFuzzySphereModel.run(self, x)
123   
[79ac6f8]124    def runXY(self, x=0.0):
125        """
126        Evaluate the model in cartesian coordinates
127       
128        :param x: input q, or [qx, qy]
129       
130        :return: scattering function P(q)
131       
[ec658c85]132        """
133       
134        return CFuzzySphereModel.runXY(self, x)
135       
[79ac6f8]136    def evalDistribution(self, x=[]):
137        """
138        Evaluate the model in cartesian coordinates
139       
140        :param x: input q[], or [qx[], qy[]]
141       
142        :return: scattering function P(q[])
143       
[ec658c85]144        """
145        return CFuzzySphereModel.evalDistribution(self, x)
146       
147    def calculate_ER(self):
[79ac6f8]148        """
149        Calculate the effective radius for P(q)*S(q)
150       
151        :return: the value of the effective radius
152       
[ec658c85]153        """       
154        return CFuzzySphereModel.calculate_ER(self)
155       
156    def set_dispersion(self, parameter, dispersion):
157        """
[79ac6f8]158        Set the dispersion object for a model parameter
159       
160        :param parameter: name of the parameter [string]
161        :param dispersion: dispersion object of type DispersionModel
162       
[ec658c85]163        """
164        return CFuzzySphereModel.set_dispersion(self, parameter, dispersion.cdisp)
165       
166   
167# End of file
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