source: sasview/sansmodels/src/sans/models/FlexCylEllipXModel.py @ a1f2002

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Last change on this file since a1f2002 was 35aface, checked in by Jae Cho <jhjcho@…>, 14 years ago

addede new models and attr. non_fittable

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File size: 5.3 KB
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[ec658c85]1#!/usr/bin/env python
2
[79ac6f8]3##############################################################################
4#       This software was developed by the University of Tennessee as part of the
5#       Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
6#       project funded by the US National Science Foundation.
7#
8#       If you use DANSE applications to do scientific research that leads to
9#       publication, we ask that you acknowledge the use of the software with the
10#       following sentence:
11#
12#       "This work benefited from DANSE software developed under NSF award DMR-0520547."
13#
14#       copyright 2008, University of Tennessee
15##############################################################################
[ec658c85]16
17
[79ac6f8]18"""
19Provide functionality for a C extension model
[ec658c85]20
[79ac6f8]21:WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
22         DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\flexcyl_ellipX.h
23         AND RE-RUN THE GENERATOR SCRIPT
[ec658c85]24
25"""
26
27from sans.models.BaseComponent import BaseComponent
28from sans_extension.c_models import CFlexCylEllipXModel
29import copy   
30   
31class FlexCylEllipXModel(CFlexCylEllipXModel, BaseComponent):
[79ac6f8]32    """
33    Class that evaluates a FlexCylEllipXModel model.
34    This file was auto-generated from ..\c_extensions\flexcyl_ellipX.h.
35    Refer to that file and the structure it contains
36    for details of the model.
37    List of default parameters:
[ec658c85]38         scale           = 1.0
39         length          = 1000.0 [A]
40         kuhn_length     = 100.0 [A]
41         radius          = 20.0 [A]
42         axis_ratio      = 1.5
43         sldCyl          = 1e-006 [1/A^(2)]
44         sldSolv         = 6.3e-006 [1/A^(2)]
45         background      = 0.0001 [1/cm]
46
47    """
48       
49    def __init__(self):
50        """ Initialization """
51       
52        # Initialize BaseComponent first, then sphere
53        BaseComponent.__init__(self)
54        CFlexCylEllipXModel.__init__(self)
55       
56        ## Name of the model
57        self.name = "FlexCylEllipXModel"
58        ## Model description
59        self.description =""" Note : scale and contrast=sldCyl-sldSolv are both multiplicative factors in the
60                model and are perfectly correlated. One or
61                both of these parameters must be held fixed
62                during model fitting."""
63       
64        ## Parameter details [units, min, max]
65        self.details = {}
66        self.details['scale'] = ['', None, None]
67        self.details['length'] = ['[A]', None, None]
68        self.details['kuhn_length'] = ['[A]', None, None]
69        self.details['radius'] = ['[A]', None, None]
70        self.details['axis_ratio'] = ['', None, None]
71        self.details['sldCyl'] = ['[1/A^(2)]', None, None]
72        self.details['sldSolv'] = ['[1/A^(2)]', None, None]
73        self.details['background'] = ['[1/cm]', None, None]
74
75        ## fittable parameters
76        self.fixed=['length.width', 'kuhn_length.width', 'radius.width', 'axis_ratio.width']
77       
[35aface]78        ## non-fittable parameters
79        self.non_fittable=[]
80       
[ec658c85]81        ## parameters with orientation
82        self.orientation_params =[]
83   
84    def clone(self):
85        """ Return a identical copy of self """
86        return self._clone(FlexCylEllipXModel())   
87       
88    def __getstate__(self):
[79ac6f8]89        """
90        return object state for pickling and copying
91        """
[ec658c85]92        model_state = {'params': self.params, 'dispersion': self.dispersion, 'log': self.log}
93       
94        return self.__dict__, model_state
95       
96    def __setstate__(self, state):
[79ac6f8]97        """
98        create object from pickled state
99       
100        :param state: the state of the current model
101       
102        """
[ec658c85]103       
104        self.__dict__, model_state = state
105        self.params = model_state['params']
106        self.dispersion = model_state['dispersion']
107        self.log = model_state['log']
108       
109   
[79ac6f8]110    def run(self, x=0.0):
111        """
112        Evaluate the model
113       
114        :param x: input q, or [q,phi]
115       
116        :return: scattering function P(q)
117       
[ec658c85]118        """
119       
120        return CFlexCylEllipXModel.run(self, x)
121   
[79ac6f8]122    def runXY(self, x=0.0):
123        """
124        Evaluate the model in cartesian coordinates
125       
126        :param x: input q, or [qx, qy]
127       
128        :return: scattering function P(q)
129       
[ec658c85]130        """
131       
132        return CFlexCylEllipXModel.runXY(self, x)
133       
[79ac6f8]134    def evalDistribution(self, x=[]):
135        """
136        Evaluate the model in cartesian coordinates
137       
138        :param x: input q[], or [qx[], qy[]]
139       
140        :return: scattering function P(q[])
141       
[ec658c85]142        """
143        return CFlexCylEllipXModel.evalDistribution(self, x)
144       
145    def calculate_ER(self):
[79ac6f8]146        """
147        Calculate the effective radius for P(q)*S(q)
148       
149        :return: the value of the effective radius
150       
[ec658c85]151        """       
152        return CFlexCylEllipXModel.calculate_ER(self)
153       
154    def set_dispersion(self, parameter, dispersion):
155        """
[79ac6f8]156        Set the dispersion object for a model parameter
157       
158        :param parameter: name of the parameter [string]
159        :param dispersion: dispersion object of type DispersionModel
160       
[ec658c85]161        """
162        return CFlexCylEllipXModel.set_dispersion(self, parameter, dispersion.cdisp)
163       
164   
165# End of file
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