[ae3ce4e] | 1 | #!/usr/bin/env python |
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[95986b5] | 2 | """ |
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| 3 | This software was developed by the University of Tennessee as part of the |
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| 4 | Distributed Data Analysis of Neutron Scattering Experiments (DANSE) |
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| 5 | project funded by the US National Science Foundation. |
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| 6 | |
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| 7 | If you use DANSE applications to do scientific research that leads to |
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| 8 | publication, we ask that you acknowledge the use of the software with the |
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| 9 | following sentence: |
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| 10 | |
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| 11 | "This work benefited from DANSE software developed under NSF award DMR-0520547." |
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| 12 | |
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| 13 | copyright 2008, University of Tennessee |
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| 14 | """ |
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| 15 | |
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[ae3ce4e] | 16 | """ Provide functionality for a C extension model |
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| 17 | |
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| 18 | WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY |
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[836fe6e] | 19 | DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\elliptical_cylinder.h |
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[ae3ce4e] | 20 | AND RE-RUN THE GENERATOR SCRIPT |
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| 21 | |
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| 22 | """ |
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| 23 | |
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| 24 | from sans.models.BaseComponent import BaseComponent |
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| 25 | from sans_extension.c_models import CEllipticalCylinderModel |
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| 26 | import copy |
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| 27 | |
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| 28 | class EllipticalCylinderModel(CEllipticalCylinderModel, BaseComponent): |
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| 29 | """ Class that evaluates a EllipticalCylinderModel model. |
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[836fe6e] | 30 | This file was auto-generated from ..\c_extensions\elliptical_cylinder.h. |
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[ae3ce4e] | 31 | Refer to that file and the structure it contains |
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| 32 | for details of the model. |
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| 33 | List of default parameters: |
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| 34 | scale = 1.0 |
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[1ed3834] | 35 | r_minor = 20.0 [A] |
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[0824909] | 36 | r_ratio = 1.5 |
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[1ed3834] | 37 | length = 400.0 [A] |
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| 38 | contrast = 3e-006 [1/A²] |
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[0824909] | 39 | background = 0.0 [1/cm] |
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| 40 | cyl_theta = 1.57 [rad] |
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| 41 | cyl_phi = 0.0 [rad] |
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| 42 | cyl_psi = 0.0 [rad] |
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[ae3ce4e] | 43 | |
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| 44 | """ |
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| 45 | |
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| 46 | def __init__(self): |
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| 47 | """ Initialization """ |
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| 48 | |
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| 49 | # Initialize BaseComponent first, then sphere |
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| 50 | BaseComponent.__init__(self) |
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| 51 | CEllipticalCylinderModel.__init__(self) |
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| 52 | |
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| 53 | ## Name of the model |
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| 54 | self.name = "EllipticalCylinderModel" |
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[836fe6e] | 55 | ## Model description |
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[0824909] | 56 | self.description ="""Please see details...""" |
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[836fe6e] | 57 | |
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[ae3ce4e] | 58 | ## Parameter details [units, min, max] |
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| 59 | self.details = {} |
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| 60 | self.details['scale'] = ['', None, None] |
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[1ed3834] | 61 | self.details['r_minor'] = ['[A]', None, None] |
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[0824909] | 62 | self.details['r_ratio'] = ['', None, None] |
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[1ed3834] | 63 | self.details['length'] = ['[A]', None, None] |
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| 64 | self.details['contrast'] = ['[1/A²]', None, None] |
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[0824909] | 65 | self.details['background'] = ['[1/cm]', None, None] |
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| 66 | self.details['cyl_theta'] = ['[rad]', None, None] |
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| 67 | self.details['cyl_phi'] = ['[rad]', None, None] |
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| 68 | self.details['cyl_psi'] = ['[rad]', None, None] |
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[836fe6e] | 69 | |
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| 70 | ## fittable parameters |
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[975ec8e] | 71 | self.fixed=['cyl_phi.width', 'cyl_theta.width', 'cyl_psi.width', 'length.width', 'r_minor.width', 'r_ratio.width'] |
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[25a608f5] | 72 | |
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| 73 | ## parameters with orientation |
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| 74 | self.orientation_params =['cyl_phi', 'cyl_theta', 'cyl_psi', 'cyl_phi.width', 'cyl_theta.width', 'cyl_psi.width'] |
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[ae3ce4e] | 75 | |
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| 76 | def clone(self): |
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| 77 | """ Return a identical copy of self """ |
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[95986b5] | 78 | return self._clone(EllipticalCylinderModel()) |
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[ae3ce4e] | 79 | |
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| 80 | def run(self, x = 0.0): |
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| 81 | """ Evaluate the model |
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| 82 | @param x: input q, or [q,phi] |
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| 83 | @return: scattering function P(q) |
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| 84 | """ |
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| 85 | |
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| 86 | return CEllipticalCylinderModel.run(self, x) |
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| 87 | |
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| 88 | def runXY(self, x = 0.0): |
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| 89 | """ Evaluate the model in cartesian coordinates |
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| 90 | @param x: input q, or [qx, qy] |
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| 91 | @return: scattering function P(q) |
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| 92 | """ |
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| 93 | |
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| 94 | return CEllipticalCylinderModel.runXY(self, x) |
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[95986b5] | 95 | |
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[9bd69098] | 96 | def evalDistribition(self, x = []): |
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| 97 | """ Evaluate the model in cartesian coordinates |
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| 98 | @param x: input q[], or [qx[], qy[]] |
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| 99 | @return: scattering function P(q[]) |
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| 100 | """ |
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| 101 | return CEllipticalCylinderModel.evalDistribition(self, x) |
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| 102 | |
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[5eb9154] | 103 | def calculate_ER(self): |
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| 104 | """ Calculate the effective radius for P(q)*S(q) |
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| 105 | @return: the value of the effective radius |
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| 106 | """ |
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| 107 | return CEllipticalCylinderModel.calculate_ER(self) |
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| 108 | |
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[95986b5] | 109 | def set_dispersion(self, parameter, dispersion): |
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| 110 | """ |
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| 111 | Set the dispersion object for a model parameter |
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| 112 | @param parameter: name of the parameter [string] |
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| 113 | @dispersion: dispersion object of type DispersionModel |
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| 114 | """ |
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| 115 | return CEllipticalCylinderModel.set_dispersion(self, parameter, dispersion.cdisp) |
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| 116 | |
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[ae3ce4e] | 117 | |
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| 118 | # End of file |
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