source: sasview/sansmodels/src/sans/models/CoreShellModel.py @ 277aab4e

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Last change on this file since 277aab4e was c451be9, checked in by Jae Cho <jhjcho@…>, 15 years ago

corrections on the definition of polydispersity as suggested by steve K: should be normalized by average volume

  • Property mode set to 100644
File size: 4.8 KB
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1#!/usr/bin/env python
2"""
3        This software was developed by the University of Tennessee as part of the
4        Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
5        project funded by the US National Science Foundation.
6
7        If you use DANSE applications to do scientific research that leads to
8        publication, we ask that you acknowledge the use of the software with the
9        following sentence:
10
11        "This work benefited from DANSE software developed under NSF award DMR-0520547."
12
13        copyright 2008, University of Tennessee
14"""
15
16""" Provide functionality for a C extension model
17
18        WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
19                 DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\core_shell.h
20                 AND RE-RUN THE GENERATOR SCRIPT
21
22"""
23
24from sans.models.BaseComponent import BaseComponent
25from sans_extension.c_models import CCoreShellModel
26import copy   
27   
28class CoreShellModel(CCoreShellModel, BaseComponent):
29    """ Class that evaluates a CoreShellModel model.
30        This file was auto-generated from ..\c_extensions\core_shell.h.
31        Refer to that file and the structure it contains
32        for details of the model.
33        List of default parameters:
34         scale           = 1.0
35         radius          = 60.0 [A]
36         thickness       = 10.0 [A]
37         core_sld        = 1e-006 [1/A^(2)]
38         shell_sld       = 2e-006 [1/A^(2)]
39         solvent_sld     = 3e-006 [1/A^(2)]
40         background      = 0.0 [1/cm]
41
42    """
43       
44    def __init__(self):
45        """ Initialization """
46       
47        # Initialize BaseComponent first, then sphere
48        BaseComponent.__init__(self)
49        CCoreShellModel.__init__(self)
50       
51        ## Name of the model
52        self.name = "CoreShellModel"
53        ## Model description
54        self.description ="""Form factor for a monodisperse spherical particle with particle
55                with a core-shell structure:
56               
57                The form factor is normalized by the
58                total particle volume.
59               
60                radius: core radius, thickness: shell thickness
61               
62                Ref: Guinier, A. and G. Fournet,
63                John Wiley and Sons, New York, 1955."""
64       
65        ## Parameter details [units, min, max]
66        self.details = {}
67        self.details['scale'] = ['', None, None]
68        self.details['radius'] = ['[A]', None, None]
69        self.details['thickness'] = ['[A]', None, None]
70        self.details['core_sld'] = ['[1/A^(2)]', None, None]
71        self.details['shell_sld'] = ['[1/A^(2)]', None, None]
72        self.details['solvent_sld'] = ['[1/A^(2)]', None, None]
73        self.details['background'] = ['[1/cm]', None, None]
74
75        ## fittable parameters
76        self.fixed=['thickness.width', 'radius.width']
77       
78        ## parameters with orientation
79        self.orientation_params =[]
80   
81    def clone(self):
82        """ Return a identical copy of self """
83        return self._clone(CoreShellModel())   
84       
85    def __getstate__(self):
86        """ return object state for pickling and copying """
87        model_state = {'params': self.params, 'dispersion': self.dispersion, 'log': self.log}
88       
89        return self.__dict__, model_state
90       
91    def __setstate__(self, state):
92        """ create object from pickled state """
93       
94        self.__dict__, model_state = state
95        self.params = model_state['params']
96        self.dispersion = model_state['dispersion']
97        self.log = model_state['log']
98       
99   
100    def run(self, x = 0.0):
101        """ Evaluate the model
102            @param x: input q, or [q,phi]
103            @return: scattering function P(q)
104        """
105       
106        return CCoreShellModel.run(self, x)
107   
108    def runXY(self, x = 0.0):
109        """ Evaluate the model in cartesian coordinates
110            @param x: input q, or [qx, qy]
111            @return: scattering function P(q)
112        """
113       
114        return CCoreShellModel.runXY(self, x)
115       
116    def evalDistribition(self, x = []):
117        """ Evaluate the model in cartesian coordinates
118            @param x: input q[], or [qx[], qy[]]
119            @return: scattering function P(q[])
120        """
121        return CCoreShellModel.evalDistribition(self, x)
122       
123    def calculate_ER(self):
124        """ Calculate the effective radius for P(q)*S(q)
125            @return: the value of the effective radius
126        """       
127        return CCoreShellModel.calculate_ER(self)
128       
129    def set_dispersion(self, parameter, dispersion):
130        """
131            Set the dispersion object for a model parameter
132            @param parameter: name of the parameter [string]
133            @dispersion: dispersion object of type DispersionModel
134        """
135        return CCoreShellModel.set_dispersion(self, parameter, dispersion.cdisp)
136       
137   
138# End of file
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