source: sasview/sansmodels/src/sans/models/CoreShellEllipsoidModel.py @ eddff027

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Last change on this file since eddff027 was eddff027, checked in by Jae Cho <jhjcho@…>, 15 years ago

added coreshellellipsoidmodel

  • Property mode set to 100644
File size: 5.0 KB
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1#!/usr/bin/env python
2"""
3        This software was developed by the University of Tennessee as part of the
4        Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
5        project funded by the US National Science Foundation.
6
7        If you use DANSE applications to do scientific research that leads to
8        publication, we ask that you acknowledge the use of the software with the
9        following sentence:
10
11        "This work benefited from DANSE software developed under NSF award DMR-0520547."
12
13        copyright 2008, University of Tennessee
14"""
15
16""" Provide functionality for a C extension model
17
18        WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
19                 DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\spheroid.h
20                 AND RE-RUN THE GENERATOR SCRIPT
21
22"""
23
24from sans.models.BaseComponent import BaseComponent
25from sans_extension.c_models import CCoreShellEllipsoidModel
26import copy   
27   
28class CoreShellEllipsoidModel(CCoreShellEllipsoidModel, BaseComponent):
29    """ Class that evaluates a CoreShellEllipsoidModel model.
30        This file was auto-generated from ..\c_extensions\spheroid.h.
31        Refer to that file and the structure it contains
32        for details of the model.
33        List of default parameters:
34         scale           = 1.0
35         equat_core      = 200.0 [A]
36         polar_core      = 20.0 [A]
37         equat_shell     = 250.0 [A]
38         polar_shell     = 30.0 [A]
39         contrast        = 1e-006 [1/A²]
40         sld_solvent     = 6.3e-006 [1/A²]
41         background      = 0.001 [1/cm]
42         axis_theta      = 0.0 [rad]
43         axis_phi        = 0.0 [rad]
44
45    """
46       
47    def __init__(self):
48        """ Initialization """
49       
50        # Initialize BaseComponent first, then sphere
51        BaseComponent.__init__(self)
52        CCoreShellEllipsoidModel.__init__(self)
53       
54        ## Name of the model
55        self.name = "CoreShellEllipsoidModel"
56        ## Model description
57        self.description ="""[SpheroidCoreShellModel] Calculates the form factor for an spheroid
58                ellipsoid particle with a core_shell structure.
59                The form factor is averaged over all possible
60                orientations of the ellipsoid such that P(q)
61                = scale*<f^2>/Vol + bkg, where f is the
62                single particle scattering amplitude.
63                [Parameters]:
64                equat_core = equatorial radius of core,
65                polar_core = polar radius of core,
66                equat_shell = equatorial radius of shell,
67                polar_shell = polar radius of shell,
68                contrast = SLD_core - SLD_shell
69                sld_solvent = SLD_solvent
70                background = Incoherent bkg
71                scale =scale
72                Note:It is the users' responsibility to ensure
73                that shell radii are larger than core radii.
74                oblate shell: equatorial radius > polar radius
75                prolate shell: equatorial radius < polar radius"""
76       
77                ## Parameter details [units, min, max]
78        self.details = {}
79        self.details['scale'] = ['', None, None]
80        self.details['equat_core'] = ['[A]', None, None]
81        self.details['polar_core'] = ['[A]', None, None]
82        self.details['equat_shell'] = ['[A]', None, None]
83        self.details['polar_shell'] = ['[A]', None, None]
84        self.details['contrast'] = ['[1/A²]', None, None]
85        self.details['sld_solvent'] = ['[1/A²]', None, None]
86        self.details['background'] = ['[1/cm]', None, None]
87        self.details['axis_theta'] = ['[rad]', None, None]
88        self.details['axis_phi'] = ['[rad]', None, None]
89
90                ## fittable parameters
91        self.fixed=['equat_core.width', 'polar_core.width', 'equat_shell.width', 'polar_shell.width', 'axis_phi.width', 'axis_theta.width']
92       
93        ## parameters with orientation
94        self.orientation_params =['axis_phi', 'axis_theta', 'axis_phi.width', 'axis_theta.width']
95   
96    def clone(self):
97        """ Return a identical copy of self """
98        return self._clone(CoreShellEllipsoidModel())   
99   
100    def run(self, x = 0.0):
101        """ Evaluate the model
102            @param x: input q, or [q,phi]
103            @return: scattering function P(q)
104        """
105       
106        return CCoreShellEllipsoidModel.run(self, x)
107   
108    def runXY(self, x = 0.0):
109        """ Evaluate the model in cartesian coordinates
110            @param x: input q, or [qx, qy]
111            @return: scattering function P(q)
112        """
113       
114        return CCoreShellEllipsoidModel.runXY(self, x)
115       
116    def evalDistribition(self, x = []):
117        """ Evaluate the model in cartesian coordinates
118            @param x: input q[], or [qx[], qy[]]
119            @return: scattering function P(q[])
120        """
121        return CCoreShellEllipsoidModel.evalDistribition(self, x)
122       
123    def set_dispersion(self, parameter, dispersion):
124        """
125            Set the dispersion object for a model parameter
126            @param parameter: name of the parameter [string]
127            @dispersion: dispersion object of type DispersionModel
128        """
129        return CCoreShellEllipsoidModel.set_dispersion(self, parameter, dispersion.cdisp)
130       
131   
132# End of file
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