[08648c0] | 1 | /** |
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| 2 | This software was developed by the University of Tennessee as part of the |
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| 3 | Distributed Data Analysis of Neutron Scattering Experiments (DANSE) |
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| 4 | project funded by the US National Science Foundation. |
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| 5 | |
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| 6 | If you use DANSE applications to do scientific research that leads to |
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| 7 | publication, we ask that you acknowledge the use of the software with the |
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| 8 | following sentence: |
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| 9 | |
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| 10 | "This work benefited from DANSE software developed under NSF award DMR-0520547." |
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| 11 | |
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| 12 | copyright 2008, University of Tennessee |
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| 13 | */ |
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| 14 | |
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| 15 | /** |
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| 16 | * Scattering model classes |
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| 17 | * The classes use the IGOR library found in |
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| 18 | * sansmodels/src/libigor |
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| 19 | * |
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| 20 | */ |
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| 21 | |
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| 22 | #include <math.h> |
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| 23 | #include "parameters.hh" |
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| 24 | #include <stdio.h> |
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| 25 | using namespace std; |
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| 26 | #include "masssurfacefractal.h" |
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| 27 | |
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| 28 | |
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| 29 | |
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| 30 | static double mass_surface_fractal_kernel(double dp[], double q) { |
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| 31 | //fit parameters |
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| 32 | double scale = dp[0]; |
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| 33 | double mass_dim = dp[1]; |
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| 34 | double surface_dim = dp[2]; |
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| 35 | double cluster_rg = dp[3]; |
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| 36 | double primary_rg = dp[4]; |
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| 37 | double background = dp[5]; |
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| 38 | |
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| 39 | //others |
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| 40 | double tot_dim = 0.0; |
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| 41 | double rc_norm = 0.0; |
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| 42 | double rp_norm = 0.0; |
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| 43 | double x_val1 = 0.0; |
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| 44 | double x_val2 = 0.0; |
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| 45 | double form_factor = 0.0; |
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| 46 | double inv_form = 0.0; |
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| 47 | |
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| 48 | // This model is valid only for 0<dm<=6 and 0<ds<=6 |
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| 49 | // Not valid values => reject as 0.0 |
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| 50 | if (mass_dim < 1e-16){ |
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| 51 | return 0.0; |
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| 52 | } |
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| 53 | if (mass_dim > 6.0){ |
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| 54 | return 0.0; |
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| 55 | } |
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| 56 | if (surface_dim < 1e-16){ |
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| 57 | return 0.0; |
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| 58 | } |
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| 59 | if (surface_dim > 6.0){ |
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| 60 | return 0.0; |
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| 61 | } |
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| 62 | tot_dim = 6.0 - surface_dim - mass_dim; |
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| 63 | //singulars |
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| 64 | if (tot_dim < 0.0){ |
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| 65 | return 0.0; |
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| 66 | } |
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| 67 | |
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| 68 | //computation |
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| 69 | mass_dim /= 2.0; |
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| 70 | tot_dim /= 2.0; |
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| 71 | rc_norm = cluster_rg * cluster_rg / (3.0 * mass_dim); |
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| 72 | if (tot_dim < 1.0e-16){ |
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| 73 | tot_dim = 1.0e-16; |
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| 74 | } |
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| 75 | rp_norm = primary_rg * primary_rg / (3.0 * tot_dim); |
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| 76 | |
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| 77 | //x for P |
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| 78 | x_val1 = 1.0 + q * q * rc_norm; |
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| 79 | x_val2 = 1.0 + q * q * rp_norm; |
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| 80 | |
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| 81 | inv_form = pow(x_val1, mass_dim) * pow(x_val2, tot_dim); |
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| 82 | |
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| 83 | //another singular |
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| 84 | if (inv_form == 0.0) return 0.0; |
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| 85 | |
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| 86 | form_factor = 1.0; |
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| 87 | form_factor /= inv_form; |
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| 88 | |
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| 89 | //scale and background |
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| 90 | form_factor *= scale; |
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| 91 | form_factor += background; |
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| 92 | return (form_factor); |
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| 93 | } |
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| 94 | |
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| 95 | MassSurfaceFractal :: MassSurfaceFractal() { |
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| 96 | scale = Parameter(1.0); |
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| 97 | mass_dim = Parameter(1.8); |
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| 98 | surface_dim = Parameter(2.3); |
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| 99 | cluster_rg = Parameter(86.7); |
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| 100 | primary_rg = Parameter(4000.0); |
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| 101 | background = Parameter(0.0); |
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| 102 | } |
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| 103 | |
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| 104 | /** |
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| 105 | * Function to evaluate 1D scattering function |
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| 106 | * @param q: q-value |
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| 107 | * @return: function value |
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| 108 | */ |
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| 109 | double MassSurfaceFractal :: operator()(double q) { |
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| 110 | double dp[6]; |
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| 111 | |
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| 112 | // Fill parameter array for IGOR library |
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| 113 | // Add the background after averaging |
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| 114 | dp[0] = scale(); |
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| 115 | dp[1] = mass_dim(); |
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| 116 | dp[2] = surface_dim(); |
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| 117 | dp[3] = cluster_rg(); |
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| 118 | dp[4] = primary_rg(); |
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| 119 | dp[5] = 0.0; |
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| 120 | |
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| 121 | //computation: no polydispersion |
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| 122 | double sum = 0.0; |
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| 123 | sum = mass_surface_fractal_kernel(dp, q); |
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| 124 | |
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| 125 | return sum + background(); |
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| 126 | } |
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| 127 | |
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| 128 | /** |
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| 129 | * Function to evaluate 2D scattering function |
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| 130 | * @param q_x: value of Q along x |
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| 131 | * @param q_y: value of Q along y |
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| 132 | * @return: function value |
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| 133 | */ |
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| 134 | double MassSurfaceFractal :: operator()(double qx, double qy) { |
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| 135 | double q = sqrt(qx*qx + qy*qy); |
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| 136 | return (*this).operator()(q); |
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| 137 | } |
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| 138 | |
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| 139 | /** |
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| 140 | * Function to evaluate 2D scattering function |
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| 141 | * @param pars: parameters of the FractalModel |
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| 142 | * @param q: q-value |
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| 143 | * @param phi: angle phi |
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| 144 | * @return: function value |
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| 145 | */ |
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| 146 | double MassSurfaceFractal :: evaluate_rphi(double q, double phi) { |
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| 147 | return (*this).operator()(q); |
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| 148 | } |
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| 149 | |
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| 150 | /** |
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| 151 | * Function to calculate effective radius |
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| 152 | * @return: effective radius value |
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| 153 | */ |
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| 154 | double MassSurfaceFractal :: calculate_ER() { |
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| 155 | //NOT implemented yet!!! 'cause None shape Model |
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| 156 | return 0.0; |
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| 157 | } |
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