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59  <div class="section" id="peakgaussmodel">
60<h1>PeakGaussModel<a class="headerlink" href="#peakgaussmodel" title="Permalink to this headline">¶</a></h1>
[c0d873f]61<div class="section" id="sans-models-peakgaussmodel">
62<h2><a class="reference internal" href="#module-sans.models.PeakGaussModel" title="sans.models.PeakGaussModel"><tt class="xref py py-mod docutils literal"><span class="pre">sans.models.PeakGaussModel</span></tt></a><a class="headerlink" href="#sans-models-peakgaussmodel" title="Permalink to this headline">¶</a></h2>
63<span class="target" id="module-sans.models.PeakGaussModel"></span><p>Model describes a Gaussian shaped peak including a flat background
[512573a]64Provide F(q) = scale*exp( -1/2 <a href="#id1"><span class="problematic" id="id2">*</span></a>[(q-q0)/B]^2 )+ background
65PeakGaussModel function as a BaseComponent model</p>
66<dl class="class">
67<dt id="sans.models.PeakGaussModel.PeakGaussModel">
68<em class="property">class </em><tt class="descclassname">sans.models.PeakGaussModel.</tt><tt class="descname">PeakGaussModel</tt><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel" title="Permalink to this definition">¶</a></dt>
69<dd><p>Bases: <a class="reference internal" href="BaseComponent.html#sans.models.BaseComponent.BaseComponent" title="sans.models.BaseComponent.BaseComponent"><tt class="xref py py-class docutils literal"><span class="pre">sans.models.BaseComponent.BaseComponent</span></tt></a></p>
70<p>Class that evaluates a gaussian  shaped peak.</p>
71<p>F(q) = scale*exp( -1/2 <a href="#id3"><span class="problematic" id="id4">*</span></a>[(q-qo)/B]^2 )+ background</p>
72<dl class="docutils">
73<dt>The model has three parameters: </dt>
74<dd>scale     =  scale
75q0        =  peak position
76B         =  standard deviation
77background=  incoherent background</dd>
78</dl>
79<dl class="method">
[c0d873f]80<dt id="sans.models.PeakGaussModel.PeakGaussModel._PeakGauss">
81<tt class="descname">_PeakGauss</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel._PeakGauss" title="Permalink to this definition">¶</a></dt>
82<dd><p>Evaluate  F(x) = scale*exp( -1/2 <a href="#id5"><span class="problematic" id="id6">*</span></a>[(x-q0)/B]^2 )+ background</p>
83</dd></dl>
84
85<dl class="method">
86<dt id="sans.models.PeakGaussModel.PeakGaussModel.__add__">
87<tt class="descname">__add__</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.__add__" title="Permalink to this definition">¶</a></dt>
88<dd></dd></dl>
89
90<dl class="method">
91<dt id="sans.models.PeakGaussModel.PeakGaussModel.__div__">
92<tt class="descname">__div__</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.__div__" title="Permalink to this definition">¶</a></dt>
93<dd></dd></dl>
94
95<dl class="method">
96<dt id="sans.models.PeakGaussModel.PeakGaussModel.__init__">
97<tt class="descname">__init__</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.__init__" title="Permalink to this definition">¶</a></dt>
98<dd><p>Initialization</p>
99</dd></dl>
100
101<dl class="attribute">
102<dt id="sans.models.PeakGaussModel.PeakGaussModel.__module__">
103<tt class="descname">__module__</tt><em class="property"> = 'sans.models.PeakGaussModel'</em><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.__module__" title="Permalink to this definition">¶</a></dt>
104<dd></dd></dl>
105
106<dl class="method">
107<dt id="sans.models.PeakGaussModel.PeakGaussModel.__mul__">
108<tt class="descname">__mul__</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.__mul__" title="Permalink to this definition">¶</a></dt>
109<dd></dd></dl>
110
111<dl class="method">
112<dt id="sans.models.PeakGaussModel.PeakGaussModel.__str__">
113<tt class="descname">__str__</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.__str__" title="Permalink to this definition">¶</a></dt>
114<dd><table class="docutils field-list" frame="void" rules="none">
115<col class="field-name" />
116<col class="field-body" />
117<tbody valign="top">
118<tr class="field-odd field"><th class="field-name">Returns:</th><td class="field-body">string representatio</td>
119</tr>
120</tbody>
121</table>
122</dd></dl>
123
124<dl class="method">
125<dt id="sans.models.PeakGaussModel.PeakGaussModel.__sub__">
126<tt class="descname">__sub__</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.__sub__" title="Permalink to this definition">¶</a></dt>
127<dd></dd></dl>
128
129<dl class="method">
130<dt id="sans.models.PeakGaussModel.PeakGaussModel._clone">
131<tt class="descname">_clone</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel._clone" title="Permalink to this definition">¶</a></dt>
132<dd><p>Internal utility function to copy the internal
133data members to a fresh copy.</p>
134</dd></dl>
135
136<dl class="method">
[512573a]137<dt id="sans.models.PeakGaussModel.PeakGaussModel.calculate_ER">
138<tt class="descname">calculate_ER</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.calculate_ER" title="Permalink to this definition">¶</a></dt>
139<dd></dd></dl>
140
141<dl class="method">
142<dt id="sans.models.PeakGaussModel.PeakGaussModel.clone">
143<tt class="descname">clone</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.clone" title="Permalink to this definition">¶</a></dt>
144<dd><p>Returns a new object identical to the current object</p>
145</dd></dl>
146
147<dl class="method">
148<dt id="sans.models.PeakGaussModel.PeakGaussModel.evalDistribution">
[c0d873f]149<tt class="descname">evalDistribution</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.evalDistribution" title="Permalink to this definition">¶</a></dt>
[512573a]150<dd><p>Evaluate a distribution of q-values.</p>
151<ul>
152<li><p class="first">For 1D, a numpy array is expected as input:</p>
153<blockquote>
154<div><p>evalDistribution(q)</p>
155</div></blockquote>
156</li>
157</ul>
158<p>where q is a numpy array.</p>
159<ul class="simple">
160<li>For 2D, a list of numpy arrays are expected: [qx_prime,qy_prime],
161where 1D arrays,</li>
162</ul>
163<p>qx_prime = [ qx[0], qx[1], qx[2], ....]
164and
165qy_prime = [ qy[0], qy[1], qy[2], ....]</p>
166<p>Then get
167q = numpy.sqrt(qx_prime^2+qy_prime^2)</p>
168<p>that is a qr in 1D array;
169q = [q[0], q[1], q[2], ....]</p>
170<table class="docutils field-list" frame="void" rules="none">
171<col class="field-name" />
172<col class="field-body" />
173<tbody valign="top">
[c0d873f]174<tr class="field-odd field"><th class="field-name">Note :</th><td class="field-body"><p class="first">Due to 2D speed issue, no anisotropic scattering
[512573a]175is supported for python models, thus C-models should have</p>
176<blockquote class="last">
177<div><p>their own evalDistribution methods.</p>
178</div></blockquote>
179</td>
180</tr>
181</tbody>
182</table>
183<p>The method is then called the following way:</p>
184<p>evalDistribution(q)
185where q is a numpy array.</p>
186<table class="docutils field-list" frame="void" rules="none">
187<col class="field-name" />
188<col class="field-body" />
189<tbody valign="top">
[c0d873f]190<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>qdist</strong> &#8211; ndarray of scalar q-values or list [qx,qy]
[512573a]191where qx,qy are 1D ndarrays</td>
192</tr>
193</tbody>
194</table>
195</dd></dl>
196
197<dl class="method">
198<dt id="sans.models.PeakGaussModel.PeakGaussModel.getDispParamList">
199<tt class="descname">getDispParamList</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.getDispParamList" title="Permalink to this definition">¶</a></dt>
200<dd><p>Return a list of all available parameters for the model</p>
201</dd></dl>
202
203<dl class="method">
204<dt id="sans.models.PeakGaussModel.PeakGaussModel.getParam">
[c0d873f]205<tt class="descname">getParam</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.getParam" title="Permalink to this definition">¶</a></dt>
[512573a]206<dd><p>Set the value of a model parameter</p>
207<table class="docutils field-list" frame="void" rules="none">
208<col class="field-name" />
209<col class="field-body" />
210<tbody valign="top">
[c0d873f]211<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>name</strong> &#8211; name of the parameter</td>
[512573a]212</tr>
213</tbody>
214</table>
215</dd></dl>
216
217<dl class="method">
218<dt id="sans.models.PeakGaussModel.PeakGaussModel.getParamList">
219<tt class="descname">getParamList</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.getParamList" title="Permalink to this definition">¶</a></dt>
220<dd><p>Return a list of all available parameters for the model</p>
221</dd></dl>
222
223<dl class="method">
224<dt id="sans.models.PeakGaussModel.PeakGaussModel.getParamListWithToken">
[c0d873f]225<tt class="descname">getParamListWithToken</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.getParamListWithToken" title="Permalink to this definition">¶</a></dt>
[512573a]226<dd></dd></dl>
227
228<dl class="method">
229<dt id="sans.models.PeakGaussModel.PeakGaussModel.getParamWithToken">
[c0d873f]230<tt class="descname">getParamWithToken</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.getParamWithToken" title="Permalink to this definition">¶</a></dt>
[512573a]231<dd></dd></dl>
232
233<dl class="method">
234<dt id="sans.models.PeakGaussModel.PeakGaussModel.is_fittable">
[c0d873f]235<tt class="descname">is_fittable</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.is_fittable" title="Permalink to this definition">¶</a></dt>
[512573a]236<dd><p>Check if a given parameter is fittable or not</p>
237<table class="docutils field-list" frame="void" rules="none">
238<col class="field-name" />
239<col class="field-body" />
240<tbody valign="top">
[c0d873f]241<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>par_name</strong> &#8211; the parameter name to check</td>
[512573a]242</tr>
243</tbody>
244</table>
245</dd></dl>
246
247<dl class="method">
248<dt id="sans.models.PeakGaussModel.PeakGaussModel.run">
[c0d873f]249<tt class="descname">run</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.run" title="Permalink to this definition">¶</a></dt>
[512573a]250<dd><p>Evaluate the model
251&#64;param x: input q-value (float or [float, float] as [r, theta])
252&#64;return: (Peak Gaussian value)</p>
253</dd></dl>
254
255<dl class="method">
256<dt id="sans.models.PeakGaussModel.PeakGaussModel.runXY">
[c0d873f]257<tt class="descname">runXY</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.runXY" title="Permalink to this definition">¶</a></dt>
[512573a]258<dd><p>Evaluate the model
259&#64;param x: input q-value (float or [float, float] as [qx, qy])
260&#64;return: Peak Gaussian value</p>
261</dd></dl>
262
263<dl class="method">
264<dt id="sans.models.PeakGaussModel.PeakGaussModel.setParam">
[c0d873f]265<tt class="descname">setParam</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.setParam" title="Permalink to this definition">¶</a></dt>
[512573a]266<dd><p>Set the value of a model parameter</p>
267<table class="docutils field-list" frame="void" rules="none">
268<col class="field-name" />
269<col class="field-body" />
270<tbody valign="top">
[c0d873f]271<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
[512573a]272<li><strong>name</strong> &#8211; name of the parameter</li>
273<li><strong>value</strong> &#8211; value of the parameter</li>
274</ul>
275</td>
276</tr>
277</tbody>
278</table>
279</dd></dl>
280
281<dl class="method">
282<dt id="sans.models.PeakGaussModel.PeakGaussModel.setParamWithToken">
[c0d873f]283<tt class="descname">setParamWithToken</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.PeakGaussModel.PeakGaussModel.setParamWithToken" title="Permalink to this definition">¶</a></dt>
[512573a]284<dd></dd></dl>
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