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56 | <div class="section" id="gausslorentzgelmodel"> |
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57 | <h1>GaussLorentzGelModel<a class="headerlink" href="#gausslorentzgelmodel" title="Permalink to this headline">¶</a></h1> |
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58 | <div class="section" id="module-sans.models.GaussLorentzGelModel"> |
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59 | <span id="sans-models-gausslorentzgelmodel"></span><h2><a class="reference internal" href="#module-sans.models.GaussLorentzGelModel" title="sans.models.GaussLorentzGelModel"><tt class="xref py py-mod docutils literal"><span class="pre">sans.models.GaussLorentzGelModel</span></tt></a><a class="headerlink" href="#module-sans.models.GaussLorentzGelModel" title="Permalink to this headline">¶</a></h2> |
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60 | <p>Provide I(q) = I_0 exp ( - R_g^2 q^2 / 3.0) |
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61 | GaussLorentzGel function as a BaseComponent model</p> |
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62 | <dl class="class"> |
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63 | <dt id="sans.models.GaussLorentzGelModel.GaussLorentzGelModel"> |
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64 | <em class="property">class </em><tt class="descclassname">sans.models.GaussLorentzGelModel.</tt><tt class="descname">GaussLorentzGelModel</tt><a class="headerlink" href="#sans.models.GaussLorentzGelModel.GaussLorentzGelModel" title="Permalink to this definition">¶</a></dt> |
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65 | <dd><p>Bases: <a class="reference internal" href="BaseComponent.html#sans.models.BaseComponent.BaseComponent" title="sans.models.BaseComponent.BaseComponent"><tt class="xref py py-class docutils literal"><span class="pre">sans.models.BaseComponent.BaseComponent</span></tt></a></p> |
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66 | <p>Class that evaluates a GaussLorentzGel model.</p> |
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67 | <dl class="docutils"> |
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68 | <dt>I(q) = scale_g*exp(- q^2*Z^2 / 2)+scale_l/(1+q^2*z^2)</dt> |
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69 | <dd><ul class="first last simple"> |
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70 | <li>background</li> |
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71 | </ul> |
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72 | </dd> |
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73 | <dt>List of default parameters:</dt> |
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74 | <dd>scale_g = Gauss scale factor |
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75 | Z = Static correlation length |
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76 | scale_l = Lorentzian scale factor |
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77 | z = Dynamic correlation length |
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78 | background = Incoherent background</dd> |
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79 | </dl> |
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80 | <dl class="method"> |
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81 | <dt id="sans.models.GaussLorentzGelModel.GaussLorentzGelModel.calculate_ER"> |
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82 | <tt class="descname">calculate_ER</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.GaussLorentzGelModel.GaussLorentzGelModel.calculate_ER" title="Permalink to this definition">¶</a></dt> |
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83 | <dd></dd></dl> |
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84 | |
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85 | <dl class="method"> |
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86 | <dt id="sans.models.GaussLorentzGelModel.GaussLorentzGelModel.clone"> |
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87 | <tt class="descname">clone</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.GaussLorentzGelModel.GaussLorentzGelModel.clone" title="Permalink to this definition">¶</a></dt> |
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88 | <dd><p>Returns a new object identical to the current object</p> |
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89 | </dd></dl> |
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90 | |
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91 | <dl class="method"> |
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92 | <dt id="sans.models.GaussLorentzGelModel.GaussLorentzGelModel.evalDistribution"> |
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93 | <tt class="descname">evalDistribution</tt><big>(</big><em>qdist</em><big>)</big><a class="headerlink" href="#sans.models.GaussLorentzGelModel.GaussLorentzGelModel.evalDistribution" title="Permalink to this definition">¶</a></dt> |
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94 | <dd><p>Evaluate a distribution of q-values.</p> |
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95 | <ul> |
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96 | <li><p class="first">For 1D, a numpy array is expected as input:</p> |
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97 | <blockquote> |
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98 | <div><p>evalDistribution(q)</p> |
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99 | </div></blockquote> |
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100 | </li> |
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101 | </ul> |
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102 | <p>where q is a numpy array.</p> |
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103 | <ul class="simple"> |
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104 | <li>For 2D, a list of numpy arrays are expected: [qx_prime,qy_prime], |
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105 | where 1D arrays,</li> |
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106 | </ul> |
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107 | <p>qx_prime = [ qx[0], qx[1], qx[2], ....] |
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108 | and |
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109 | qy_prime = [ qy[0], qy[1], qy[2], ....]</p> |
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110 | <p>Then get |
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111 | q = numpy.sqrt(qx_prime^2+qy_prime^2)</p> |
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112 | <p>that is a qr in 1D array; |
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113 | q = [q[0], q[1], q[2], ....]</p> |
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114 | <table class="docutils field-list" frame="void" rules="none"> |
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115 | <col class="field-name" /> |
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116 | <col class="field-body" /> |
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117 | <tbody valign="top"> |
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118 | <tr class="field"><th class="field-name">Note :</th><td class="field-body"><p class="first">Due to 2D speed issue, no anisotropic scattering |
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119 | is supported for python models, thus C-models should have</p> |
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120 | <blockquote class="last"> |
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121 | <div><p>their own evalDistribution methods.</p> |
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122 | </div></blockquote> |
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123 | </td> |
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124 | </tr> |
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125 | </tbody> |
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126 | </table> |
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127 | <p>The method is then called the following way:</p> |
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128 | <p>evalDistribution(q) |
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129 | where q is a numpy array.</p> |
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130 | <table class="docutils field-list" frame="void" rules="none"> |
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131 | <col class="field-name" /> |
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132 | <col class="field-body" /> |
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133 | <tbody valign="top"> |
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134 | <tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>qdist</strong> – ndarray of scalar q-values or list [qx,qy] |
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135 | where qx,qy are 1D ndarrays</td> |
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136 | </tr> |
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137 | </tbody> |
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138 | </table> |
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139 | </dd></dl> |
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140 | |
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141 | <dl class="method"> |
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142 | <dt id="sans.models.GaussLorentzGelModel.GaussLorentzGelModel.getDispParamList"> |
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143 | <tt class="descname">getDispParamList</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.GaussLorentzGelModel.GaussLorentzGelModel.getDispParamList" title="Permalink to this definition">¶</a></dt> |
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144 | <dd><p>Return a list of all available parameters for the model</p> |
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145 | </dd></dl> |
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146 | |
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147 | <dl class="method"> |
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148 | <dt id="sans.models.GaussLorentzGelModel.GaussLorentzGelModel.getParam"> |
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149 | <tt class="descname">getParam</tt><big>(</big><em>name</em><big>)</big><a class="headerlink" href="#sans.models.GaussLorentzGelModel.GaussLorentzGelModel.getParam" title="Permalink to this definition">¶</a></dt> |
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150 | <dd><p>Set the value of a model parameter</p> |
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151 | <table class="docutils field-list" frame="void" rules="none"> |
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152 | <col class="field-name" /> |
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153 | <col class="field-body" /> |
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154 | <tbody valign="top"> |
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155 | <tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>name</strong> – name of the parameter</td> |
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156 | </tr> |
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157 | </tbody> |
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158 | </table> |
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159 | </dd></dl> |
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160 | |
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161 | <dl class="method"> |
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162 | <dt id="sans.models.GaussLorentzGelModel.GaussLorentzGelModel.getParamList"> |
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163 | <tt class="descname">getParamList</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.GaussLorentzGelModel.GaussLorentzGelModel.getParamList" title="Permalink to this definition">¶</a></dt> |
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164 | <dd><p>Return a list of all available parameters for the model</p> |
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165 | </dd></dl> |
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166 | |
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167 | <dl class="method"> |
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168 | <dt id="sans.models.GaussLorentzGelModel.GaussLorentzGelModel.getParamListWithToken"> |
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169 | <tt class="descname">getParamListWithToken</tt><big>(</big><em>token</em>, <em>member</em><big>)</big><a class="headerlink" href="#sans.models.GaussLorentzGelModel.GaussLorentzGelModel.getParamListWithToken" title="Permalink to this definition">¶</a></dt> |
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170 | <dd></dd></dl> |
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171 | |
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172 | <dl class="method"> |
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173 | <dt id="sans.models.GaussLorentzGelModel.GaussLorentzGelModel.getParamWithToken"> |
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174 | <tt class="descname">getParamWithToken</tt><big>(</big><em>name</em>, <em>token</em>, <em>member</em><big>)</big><a class="headerlink" href="#sans.models.GaussLorentzGelModel.GaussLorentzGelModel.getParamWithToken" title="Permalink to this definition">¶</a></dt> |
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175 | <dd></dd></dl> |
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176 | |
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177 | <dl class="method"> |
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178 | <dt id="sans.models.GaussLorentzGelModel.GaussLorentzGelModel.is_fittable"> |
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179 | <tt class="descname">is_fittable</tt><big>(</big><em>par_name</em><big>)</big><a class="headerlink" href="#sans.models.GaussLorentzGelModel.GaussLorentzGelModel.is_fittable" title="Permalink to this definition">¶</a></dt> |
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180 | <dd><p>Check if a given parameter is fittable or not</p> |
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181 | <table class="docutils field-list" frame="void" rules="none"> |
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182 | <col class="field-name" /> |
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183 | <col class="field-body" /> |
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184 | <tbody valign="top"> |
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185 | <tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>par_name</strong> – the parameter name to check</td> |
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186 | </tr> |
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187 | </tbody> |
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188 | </table> |
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189 | </dd></dl> |
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190 | |
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191 | <dl class="method"> |
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192 | <dt id="sans.models.GaussLorentzGelModel.GaussLorentzGelModel.run"> |
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193 | <tt class="descname">run</tt><big>(</big><em>x=0.0</em><big>)</big><a class="headerlink" href="#sans.models.GaussLorentzGelModel.GaussLorentzGelModel.run" title="Permalink to this definition">¶</a></dt> |
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194 | <dd><p>Evaluate the model |
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195 | @param x: input q-value (float or [float, float] as [r, theta]) |
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196 | @return: (guinier value)</p> |
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197 | </dd></dl> |
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198 | |
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199 | <dl class="method"> |
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200 | <dt id="sans.models.GaussLorentzGelModel.GaussLorentzGelModel.runXY"> |
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201 | <tt class="descname">runXY</tt><big>(</big><em>x=0.0</em><big>)</big><a class="headerlink" href="#sans.models.GaussLorentzGelModel.GaussLorentzGelModel.runXY" title="Permalink to this definition">¶</a></dt> |
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202 | <dd><p>Evaluate the model |
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203 | @param x: input q-value (float or [float, float] as [qx, qy]) |
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204 | @return: guinier value</p> |
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205 | </dd></dl> |
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206 | |
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207 | <dl class="method"> |
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208 | <dt id="sans.models.GaussLorentzGelModel.GaussLorentzGelModel.setParam"> |
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209 | <tt class="descname">setParam</tt><big>(</big><em>name</em>, <em>value</em><big>)</big><a class="headerlink" href="#sans.models.GaussLorentzGelModel.GaussLorentzGelModel.setParam" title="Permalink to this definition">¶</a></dt> |
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210 | <dd><p>Set the value of a model parameter</p> |
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211 | <table class="docutils field-list" frame="void" rules="none"> |
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212 | <col class="field-name" /> |
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213 | <col class="field-body" /> |
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214 | <tbody valign="top"> |
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215 | <tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple"> |
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216 | <li><strong>name</strong> – name of the parameter</li> |
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217 | <li><strong>value</strong> – value of the parameter</li> |
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218 | </ul> |
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219 | </td> |
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220 | </tr> |
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221 | </tbody> |
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222 | </table> |
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223 | </dd></dl> |
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224 | |
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225 | <dl class="method"> |
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226 | <dt id="sans.models.GaussLorentzGelModel.GaussLorentzGelModel.setParamWithToken"> |
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227 | <tt class="descname">setParamWithToken</tt><big>(</big><em>name</em>, <em>value</em>, <em>token</em>, <em>member</em><big>)</big><a class="headerlink" href="#sans.models.GaussLorentzGelModel.GaussLorentzGelModel.setParamWithToken" title="Permalink to this definition">¶</a></dt> |
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228 | <dd></dd></dl> |
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229 | |
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