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| 58 | |
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| 59 | <div class="section" id="dabmodel"> |
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| 60 | <h1>DABModel<a class="headerlink" href="#dabmodel" title="Permalink to this headline">¶</a></h1> |
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[c0d873f] | 61 | <div class="section" id="sans-models-dabmodel"> |
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| 62 | <h2><a class="reference internal" href="#module-sans.models.DABModel" title="sans.models.DABModel"><tt class="xref py py-mod docutils literal"><span class="pre">sans.models.DABModel</span></tt></a><a class="headerlink" href="#sans-models-dabmodel" title="Permalink to this headline">¶</a></h2> |
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| 63 | <span class="target" id="module-sans.models.DABModel"></span><p>Provide F(x) = scale/( 1 + (x*L)^2 )^(2) + background |
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[512573a] | 64 | DAB (Debye Anderson Brumberger) function as a BaseComponent model</p> |
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| 65 | <dl class="class"> |
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| 66 | <dt id="sans.models.DABModel.DABModel"> |
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| 67 | <em class="property">class </em><tt class="descclassname">sans.models.DABModel.</tt><tt class="descname">DABModel</tt><a class="headerlink" href="#sans.models.DABModel.DABModel" title="Permalink to this definition">¶</a></dt> |
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| 68 | <dd><p>Bases: <a class="reference internal" href="BaseComponent.html#sans.models.BaseComponent.BaseComponent" title="sans.models.BaseComponent.BaseComponent"><tt class="xref py py-class docutils literal"><span class="pre">sans.models.BaseComponent.BaseComponent</span></tt></a></p> |
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| 69 | <p>Class that evaluates a DAB model.</p> |
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| 70 | <p>F(x) = scale*(L^3)/( 1 + (x*L)^2 )^(2) + background</p> |
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| 71 | <dl class="docutils"> |
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| 72 | <dt>The model has three parameters: </dt> |
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| 73 | <dd>L = Correlation Length |
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| 74 | scale = scale factor |
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| 75 | background = incoherent background</dd> |
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| 76 | </dl> |
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| 77 | <dl class="method"> |
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[c0d873f] | 78 | <dt id="sans.models.DABModel.DABModel._DAB"> |
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| 79 | <tt class="descname">_DAB</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel._DAB" title="Permalink to this definition">¶</a></dt> |
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| 80 | <dd><p>Evaluate F(x) = (scale*L^3)/( 1 + (x*L)^2 )^(2) + background</p> |
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| 81 | </dd></dl> |
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| 82 | |
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| 83 | <dl class="method"> |
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| 84 | <dt id="sans.models.DABModel.DABModel.__add__"> |
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| 85 | <tt class="descname">__add__</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.__add__" title="Permalink to this definition">¶</a></dt> |
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| 86 | <dd></dd></dl> |
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| 87 | |
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| 88 | <dl class="method"> |
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| 89 | <dt id="sans.models.DABModel.DABModel.__div__"> |
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| 90 | <tt class="descname">__div__</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.__div__" title="Permalink to this definition">¶</a></dt> |
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| 91 | <dd></dd></dl> |
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| 92 | |
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| 93 | <dl class="method"> |
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| 94 | <dt id="sans.models.DABModel.DABModel.__init__"> |
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| 95 | <tt class="descname">__init__</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.__init__" title="Permalink to this definition">¶</a></dt> |
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| 96 | <dd><p>Initialization</p> |
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| 97 | </dd></dl> |
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| 98 | |
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| 99 | <dl class="attribute"> |
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| 100 | <dt id="sans.models.DABModel.DABModel.__module__"> |
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| 101 | <tt class="descname">__module__</tt><em class="property"> = 'sans.models.DABModel'</em><a class="headerlink" href="#sans.models.DABModel.DABModel.__module__" title="Permalink to this definition">¶</a></dt> |
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| 102 | <dd></dd></dl> |
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| 103 | |
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| 104 | <dl class="method"> |
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| 105 | <dt id="sans.models.DABModel.DABModel.__mul__"> |
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| 106 | <tt class="descname">__mul__</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.__mul__" title="Permalink to this definition">¶</a></dt> |
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| 107 | <dd></dd></dl> |
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| 108 | |
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| 109 | <dl class="method"> |
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| 110 | <dt id="sans.models.DABModel.DABModel.__str__"> |
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| 111 | <tt class="descname">__str__</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.__str__" title="Permalink to this definition">¶</a></dt> |
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| 112 | <dd><table class="docutils field-list" frame="void" rules="none"> |
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| 113 | <col class="field-name" /> |
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| 114 | <col class="field-body" /> |
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| 115 | <tbody valign="top"> |
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| 116 | <tr class="field-odd field"><th class="field-name">Returns:</th><td class="field-body">string representatio</td> |
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| 117 | </tr> |
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| 118 | </tbody> |
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| 119 | </table> |
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| 120 | </dd></dl> |
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| 121 | |
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| 122 | <dl class="method"> |
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| 123 | <dt id="sans.models.DABModel.DABModel.__sub__"> |
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| 124 | <tt class="descname">__sub__</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.__sub__" title="Permalink to this definition">¶</a></dt> |
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| 125 | <dd></dd></dl> |
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| 126 | |
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| 127 | <dl class="method"> |
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| 128 | <dt id="sans.models.DABModel.DABModel._clone"> |
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| 129 | <tt class="descname">_clone</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel._clone" title="Permalink to this definition">¶</a></dt> |
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| 130 | <dd><p>Internal utility function to copy the internal |
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| 131 | data members to a fresh copy.</p> |
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| 132 | </dd></dl> |
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| 133 | |
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| 134 | <dl class="method"> |
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[512573a] | 135 | <dt id="sans.models.DABModel.DABModel.calculate_ER"> |
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| 136 | <tt class="descname">calculate_ER</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.calculate_ER" title="Permalink to this definition">¶</a></dt> |
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| 137 | <dd></dd></dl> |
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| 138 | |
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| 139 | <dl class="method"> |
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| 140 | <dt id="sans.models.DABModel.DABModel.clone"> |
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| 141 | <tt class="descname">clone</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.clone" title="Permalink to this definition">¶</a></dt> |
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| 142 | <dd><p>Returns a new object identical to the current object</p> |
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| 143 | </dd></dl> |
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| 144 | |
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| 145 | <dl class="method"> |
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| 146 | <dt id="sans.models.DABModel.DABModel.evalDistribution"> |
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[c0d873f] | 147 | <tt class="descname">evalDistribution</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.evalDistribution" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 148 | <dd><p>Evaluate a distribution of q-values.</p> |
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| 149 | <ul> |
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| 150 | <li><p class="first">For 1D, a numpy array is expected as input:</p> |
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| 151 | <blockquote> |
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| 152 | <div><p>evalDistribution(q)</p> |
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| 153 | </div></blockquote> |
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| 154 | </li> |
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| 155 | </ul> |
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| 156 | <p>where q is a numpy array.</p> |
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| 157 | <ul class="simple"> |
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| 158 | <li>For 2D, a list of numpy arrays are expected: [qx_prime,qy_prime], |
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| 159 | where 1D arrays,</li> |
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| 160 | </ul> |
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| 161 | <p>qx_prime = [ qx[0], qx[1], qx[2], ....] |
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| 162 | and |
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| 163 | qy_prime = [ qy[0], qy[1], qy[2], ....]</p> |
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| 164 | <p>Then get |
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| 165 | q = numpy.sqrt(qx_prime^2+qy_prime^2)</p> |
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| 166 | <p>that is a qr in 1D array; |
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| 167 | q = [q[0], q[1], q[2], ....]</p> |
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| 168 | <table class="docutils field-list" frame="void" rules="none"> |
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| 169 | <col class="field-name" /> |
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| 170 | <col class="field-body" /> |
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| 171 | <tbody valign="top"> |
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[c0d873f] | 172 | <tr class="field-odd field"><th class="field-name">Note :</th><td class="field-body"><p class="first">Due to 2D speed issue, no anisotropic scattering |
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[512573a] | 173 | is supported for python models, thus C-models should have</p> |
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| 174 | <blockquote class="last"> |
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| 175 | <div><p>their own evalDistribution methods.</p> |
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| 176 | </div></blockquote> |
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| 177 | </td> |
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| 178 | </tr> |
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| 179 | </tbody> |
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| 180 | </table> |
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| 181 | <p>The method is then called the following way:</p> |
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| 182 | <p>evalDistribution(q) |
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| 183 | where q is a numpy array.</p> |
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| 184 | <table class="docutils field-list" frame="void" rules="none"> |
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| 185 | <col class="field-name" /> |
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| 186 | <col class="field-body" /> |
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| 187 | <tbody valign="top"> |
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[c0d873f] | 188 | <tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>qdist</strong> – ndarray of scalar q-values or list [qx,qy] |
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[512573a] | 189 | where qx,qy are 1D ndarrays</td> |
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| 190 | </tr> |
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| 191 | </tbody> |
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| 192 | </table> |
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| 193 | </dd></dl> |
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| 194 | |
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| 195 | <dl class="method"> |
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| 196 | <dt id="sans.models.DABModel.DABModel.getDispParamList"> |
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| 197 | <tt class="descname">getDispParamList</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.getDispParamList" title="Permalink to this definition">¶</a></dt> |
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| 198 | <dd><p>Return a list of all available parameters for the model</p> |
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| 199 | </dd></dl> |
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| 200 | |
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| 201 | <dl class="method"> |
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| 202 | <dt id="sans.models.DABModel.DABModel.getParam"> |
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[c0d873f] | 203 | <tt class="descname">getParam</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.getParam" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 204 | <dd><p>Set the value of a model parameter</p> |
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| 205 | <table class="docutils field-list" frame="void" rules="none"> |
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| 206 | <col class="field-name" /> |
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| 207 | <col class="field-body" /> |
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| 208 | <tbody valign="top"> |
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[c0d873f] | 209 | <tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>name</strong> – name of the parameter</td> |
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[512573a] | 210 | </tr> |
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| 211 | </tbody> |
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| 212 | </table> |
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| 213 | </dd></dl> |
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| 214 | |
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| 215 | <dl class="method"> |
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| 216 | <dt id="sans.models.DABModel.DABModel.getParamList"> |
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| 217 | <tt class="descname">getParamList</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.getParamList" title="Permalink to this definition">¶</a></dt> |
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| 218 | <dd><p>Return a list of all available parameters for the model</p> |
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| 219 | </dd></dl> |
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| 220 | |
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| 221 | <dl class="method"> |
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| 222 | <dt id="sans.models.DABModel.DABModel.getParamListWithToken"> |
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[c0d873f] | 223 | <tt class="descname">getParamListWithToken</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.getParamListWithToken" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 224 | <dd></dd></dl> |
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| 225 | |
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| 226 | <dl class="method"> |
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| 227 | <dt id="sans.models.DABModel.DABModel.getParamWithToken"> |
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[c0d873f] | 228 | <tt class="descname">getParamWithToken</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.getParamWithToken" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 229 | <dd></dd></dl> |
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| 230 | |
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| 231 | <dl class="method"> |
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| 232 | <dt id="sans.models.DABModel.DABModel.is_fittable"> |
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[c0d873f] | 233 | <tt class="descname">is_fittable</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.is_fittable" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 234 | <dd><p>Check if a given parameter is fittable or not</p> |
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| 235 | <table class="docutils field-list" frame="void" rules="none"> |
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| 236 | <col class="field-name" /> |
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| 237 | <col class="field-body" /> |
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| 238 | <tbody valign="top"> |
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[c0d873f] | 239 | <tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>par_name</strong> – the parameter name to check</td> |
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[512573a] | 240 | </tr> |
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| 241 | </tbody> |
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| 242 | </table> |
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| 243 | </dd></dl> |
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| 244 | |
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| 245 | <dl class="method"> |
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| 246 | <dt id="sans.models.DABModel.DABModel.run"> |
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[c0d873f] | 247 | <tt class="descname">run</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.run" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 248 | <dd><p>Evaluate the model |
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| 249 | @param x: input q-value (float or [float, float] as [r, theta]) |
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| 250 | @return: (DAB value)</p> |
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| 251 | </dd></dl> |
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| 252 | |
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| 253 | <dl class="method"> |
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| 254 | <dt id="sans.models.DABModel.DABModel.runXY"> |
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[c0d873f] | 255 | <tt class="descname">runXY</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.runXY" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 256 | <dd><p>Evaluate the model |
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| 257 | @param x: input q-value (float or [float, float] as [qx, qy]) |
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| 258 | @return: DAB value</p> |
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| 259 | </dd></dl> |
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| 260 | |
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| 261 | <dl class="method"> |
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| 262 | <dt id="sans.models.DABModel.DABModel.setParam"> |
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[c0d873f] | 263 | <tt class="descname">setParam</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.setParam" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 264 | <dd><p>Set the value of a model parameter</p> |
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| 265 | <table class="docutils field-list" frame="void" rules="none"> |
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| 266 | <col class="field-name" /> |
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| 267 | <col class="field-body" /> |
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| 268 | <tbody valign="top"> |
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[c0d873f] | 269 | <tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple"> |
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[512573a] | 270 | <li><strong>name</strong> – name of the parameter</li> |
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| 271 | <li><strong>value</strong> – value of the parameter</li> |
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| 272 | </ul> |
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| 273 | </td> |
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| 274 | </tr> |
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| 275 | </tbody> |
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| 276 | </table> |
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| 277 | </dd></dl> |
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| 278 | |
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| 279 | <dl class="method"> |
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| 280 | <dt id="sans.models.DABModel.DABModel.setParamWithToken"> |
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[c0d873f] | 281 | <tt class="descname">setParamWithToken</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.DABModel.DABModel.setParamWithToken" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 282 | <dd></dd></dl> |
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| 283 | |
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| 284 | </dd></dl> |
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| 285 | |
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| 286 | </div> |
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| 287 | </div> |
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| 288 | |
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| 289 | |
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| 290 | </div> |
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| 291 | </div> |
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| 292 | </div> |
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| 293 | <div class="sphinxsidebar"> |
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| 294 | <div class="sphinxsidebarwrapper"> |
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| 295 | <h3><a href="../index.html">Table Of Contents</a></h3> |
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| 296 | <ul> |
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| 297 | <li><a class="reference internal" href="#">DABModel</a><ul> |
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[c0d873f] | 298 | <li><a class="reference internal" href="#sans-models-dabmodel"><tt class="docutils literal"><span class="pre">sans.models.DABModel</span></tt></a></li> |
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[512573a] | 299 | </ul> |
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| 300 | </li> |
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| 301 | </ul> |
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| 302 | |
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| 303 | <h4>Previous topic</h4> |
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| 304 | <p class="topless"><a href="CylinderModel.html" |
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| 305 | title="previous chapter">CylinderModel</a></p> |
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| 306 | <h4>Next topic</h4> |
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| 307 | <p class="topless"><a href="DebyeModel.html" |
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| 308 | title="next chapter">DebyeModel</a></p> |
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| 309 | <h3>This Page</h3> |
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| 311 | <li><a href="../_sources/api/DABModel.txt" |
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| 344 | <a href="CylinderModel.html" title="CylinderModel" |
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[c0d873f] | 346 | <li><a href="../index.html">sansmodels 0.1.0 documentation</a> »</li> |
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[512573a] | 347 | <li><a href="index.html" >Reference</a> »</li> |
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