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| 51 | </ul> |
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| 57 | <div class="body"> |
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| 58 | |
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| 59 | <div class="section" id="addcomponent"> |
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| 60 | <h1>AddComponent<a class="headerlink" href="#addcomponent" title="Permalink to this headline">¶</a></h1> |
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[c0d873f] | 61 | <div class="section" id="sans-models-addcomponent"> |
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| 62 | <h2><a class="reference internal" href="#module-sans.models.AddComponent" title="sans.models.AddComponent"><tt class="xref py py-mod docutils literal"><span class="pre">sans.models.AddComponent</span></tt></a><a class="headerlink" href="#sans-models-addcomponent" title="Permalink to this headline">¶</a></h2> |
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| 63 | <span class="target" id="module-sans.models.AddComponent"></span><p>Provide base functionality for all model components</p> |
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[512573a] | 64 | <table class="docutils field-list" frame="void" rules="none"> |
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| 65 | <col class="field-name" /> |
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| 66 | <col class="field-body" /> |
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| 67 | <tbody valign="top"> |
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[c0d873f] | 68 | <tr class="field-odd field"><th class="field-name">author:</th><td class="field-body">Mathieu Doucet / UTK</td> |
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[512573a] | 69 | </tr> |
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[c0d873f] | 70 | <tr class="field-even field"><th class="field-name">contact:</th><td class="field-body"><a class="reference external" href="mailto:mathieu.doucet%40nist.gov">mathieu<span>.</span>doucet<span>@</span>nist<span>.</span>gov</a></td> |
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[512573a] | 71 | </tr> |
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| 72 | </tbody> |
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| 73 | </table> |
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| 74 | <dl class="class"> |
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| 75 | <dt id="sans.models.AddComponent.AddComponent"> |
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[c0d873f] | 76 | <em class="property">class </em><tt class="descclassname">sans.models.AddComponent.</tt><tt class="descname">AddComponent</tt><a class="headerlink" href="#sans.models.AddComponent.AddComponent" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 77 | <dd><p>Bases: <a class="reference internal" href="BaseComponent.html#sans.models.BaseComponent.BaseComponent" title="sans.models.BaseComponent.BaseComponent"><tt class="xref py py-class docutils literal"><span class="pre">sans.models.BaseComponent.BaseComponent</span></tt></a></p> |
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| 78 | <p>Basic model component for Addition |
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| 79 | Provides basic arithmetics</p> |
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| 80 | <dl class="method"> |
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[c0d873f] | 81 | <dt id="sans.models.AddComponent.AddComponent.__add__"> |
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| 82 | <tt class="descname">__add__</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.__add__" title="Permalink to this definition">¶</a></dt> |
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| 83 | <dd></dd></dl> |
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| 84 | |
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| 85 | <dl class="method"> |
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| 86 | <dt id="sans.models.AddComponent.AddComponent.__div__"> |
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| 87 | <tt class="descname">__div__</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.__div__" title="Permalink to this definition">¶</a></dt> |
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| 88 | <dd></dd></dl> |
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| 89 | |
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| 90 | <dl class="method"> |
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| 91 | <dt id="sans.models.AddComponent.AddComponent.__init__"> |
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| 92 | <tt class="descname">__init__</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.__init__" title="Permalink to this definition">¶</a></dt> |
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| 93 | <dd><table class="docutils field-list" frame="void" rules="none"> |
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| 94 | <col class="field-name" /> |
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| 95 | <col class="field-body" /> |
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| 96 | <tbody valign="top"> |
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| 97 | <tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple"> |
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| 98 | <li><strong>base</strong> – component to add to</li> |
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| 99 | <li><strong>other</strong> – component to add</li> |
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| 100 | </ul> |
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| 101 | </td> |
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| 102 | </tr> |
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| 103 | </tbody> |
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| 104 | </table> |
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| 105 | </dd></dl> |
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| 106 | |
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| 107 | <dl class="attribute"> |
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| 108 | <dt id="sans.models.AddComponent.AddComponent.__module__"> |
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| 109 | <tt class="descname">__module__</tt><em class="property"> = 'sans.models.AddComponent'</em><a class="headerlink" href="#sans.models.AddComponent.AddComponent.__module__" title="Permalink to this definition">¶</a></dt> |
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| 110 | <dd></dd></dl> |
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| 111 | |
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| 112 | <dl class="method"> |
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| 113 | <dt id="sans.models.AddComponent.AddComponent.__mul__"> |
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| 114 | <tt class="descname">__mul__</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.__mul__" title="Permalink to this definition">¶</a></dt> |
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| 115 | <dd></dd></dl> |
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| 116 | |
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| 117 | <dl class="method"> |
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| 118 | <dt id="sans.models.AddComponent.AddComponent.__str__"> |
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| 119 | <tt class="descname">__str__</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.__str__" title="Permalink to this definition">¶</a></dt> |
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| 120 | <dd><table class="docutils field-list" frame="void" rules="none"> |
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| 121 | <col class="field-name" /> |
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| 122 | <col class="field-body" /> |
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| 123 | <tbody valign="top"> |
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| 124 | <tr class="field-odd field"><th class="field-name">Returns:</th><td class="field-body">string representatio</td> |
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| 125 | </tr> |
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| 126 | </tbody> |
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| 127 | </table> |
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| 128 | </dd></dl> |
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| 129 | |
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| 130 | <dl class="method"> |
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| 131 | <dt id="sans.models.AddComponent.AddComponent.__sub__"> |
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| 132 | <tt class="descname">__sub__</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.__sub__" title="Permalink to this definition">¶</a></dt> |
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| 133 | <dd></dd></dl> |
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| 134 | |
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| 135 | <dl class="method"> |
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| 136 | <dt id="sans.models.AddComponent.AddComponent._clone"> |
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| 137 | <tt class="descname">_clone</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent._clone" title="Permalink to this definition">¶</a></dt> |
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| 138 | <dd><p>Internal utility function to copy the internal |
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| 139 | data members to a fresh copy.</p> |
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| 140 | </dd></dl> |
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| 141 | |
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| 142 | <dl class="method"> |
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[512573a] | 143 | <dt id="sans.models.AddComponent.AddComponent.calculate_ER"> |
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| 144 | <tt class="descname">calculate_ER</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.calculate_ER" title="Permalink to this definition">¶</a></dt> |
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| 145 | <dd></dd></dl> |
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| 146 | |
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| 147 | <dl class="method"> |
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| 148 | <dt id="sans.models.AddComponent.AddComponent.clone"> |
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| 149 | <tt class="descname">clone</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.clone" title="Permalink to this definition">¶</a></dt> |
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| 150 | <dd><p>Returns a new object identical to the current object</p> |
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| 151 | </dd></dl> |
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| 152 | |
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| 153 | <dl class="method"> |
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| 154 | <dt id="sans.models.AddComponent.AddComponent.evalDistribution"> |
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[c0d873f] | 155 | <tt class="descname">evalDistribution</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.evalDistribution" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 156 | <dd><p>Evaluate a distribution of q-values.</p> |
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| 157 | <ul> |
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| 158 | <li><p class="first">For 1D, a numpy array is expected as input:</p> |
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| 159 | <blockquote> |
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| 160 | <div><p>evalDistribution(q)</p> |
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| 161 | </div></blockquote> |
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| 162 | </li> |
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| 163 | </ul> |
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| 164 | <p>where q is a numpy array.</p> |
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| 165 | <ul class="simple"> |
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| 166 | <li>For 2D, a list of numpy arrays are expected: [qx_prime,qy_prime], |
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| 167 | where 1D arrays,</li> |
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| 168 | </ul> |
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| 169 | <p>qx_prime = [ qx[0], qx[1], qx[2], ....] |
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| 170 | and |
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| 171 | qy_prime = [ qy[0], qy[1], qy[2], ....]</p> |
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| 172 | <p>Then get |
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| 173 | q = numpy.sqrt(qx_prime^2+qy_prime^2)</p> |
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| 174 | <p>that is a qr in 1D array; |
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| 175 | q = [q[0], q[1], q[2], ....]</p> |
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| 176 | <table class="docutils field-list" frame="void" rules="none"> |
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| 177 | <col class="field-name" /> |
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| 178 | <col class="field-body" /> |
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| 179 | <tbody valign="top"> |
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[c0d873f] | 180 | <tr class="field-odd field"><th class="field-name">Note :</th><td class="field-body"><p class="first">Due to 2D speed issue, no anisotropic scattering |
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[512573a] | 181 | is supported for python models, thus C-models should have</p> |
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| 182 | <blockquote class="last"> |
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| 183 | <div><p>their own evalDistribution methods.</p> |
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| 184 | </div></blockquote> |
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| 185 | </td> |
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| 186 | </tr> |
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| 187 | </tbody> |
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| 188 | </table> |
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| 189 | <p>The method is then called the following way:</p> |
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| 190 | <p>evalDistribution(q) |
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| 191 | where q is a numpy array.</p> |
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| 192 | <table class="docutils field-list" frame="void" rules="none"> |
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| 193 | <col class="field-name" /> |
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| 194 | <col class="field-body" /> |
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| 195 | <tbody valign="top"> |
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[c0d873f] | 196 | <tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>qdist</strong> – ndarray of scalar q-values or list [qx,qy] |
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[512573a] | 197 | where qx,qy are 1D ndarrays</td> |
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| 198 | </tr> |
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| 199 | </tbody> |
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| 200 | </table> |
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| 201 | </dd></dl> |
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| 202 | |
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| 203 | <dl class="method"> |
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| 204 | <dt id="sans.models.AddComponent.AddComponent.getDispParamList"> |
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| 205 | <tt class="descname">getDispParamList</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.getDispParamList" title="Permalink to this definition">¶</a></dt> |
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| 206 | <dd><p>Return a list of all available parameters for the model</p> |
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| 207 | </dd></dl> |
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| 208 | |
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| 209 | <dl class="method"> |
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| 210 | <dt id="sans.models.AddComponent.AddComponent.getParam"> |
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[c0d873f] | 211 | <tt class="descname">getParam</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.getParam" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 212 | <dd><p>Set the value of a model parameter</p> |
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| 213 | <table class="docutils field-list" frame="void" rules="none"> |
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| 214 | <col class="field-name" /> |
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| 215 | <col class="field-body" /> |
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| 216 | <tbody valign="top"> |
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[c0d873f] | 217 | <tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>name</strong> – name of the parameter</td> |
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[512573a] | 218 | </tr> |
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[c0d873f] | 219 | <tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">value of the parameter</td> |
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[512573a] | 220 | </tr> |
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| 221 | </tbody> |
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| 222 | </table> |
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| 223 | </dd></dl> |
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| 224 | |
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| 225 | <dl class="method"> |
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| 226 | <dt id="sans.models.AddComponent.AddComponent.getParamList"> |
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| 227 | <tt class="descname">getParamList</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.getParamList" title="Permalink to this definition">¶</a></dt> |
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| 228 | <dd><p>Return a list of all available parameters for the model</p> |
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| 229 | </dd></dl> |
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| 230 | |
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| 231 | <dl class="method"> |
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| 232 | <dt id="sans.models.AddComponent.AddComponent.getParamListWithToken"> |
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[c0d873f] | 233 | <tt class="descname">getParamListWithToken</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.getParamListWithToken" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 234 | <dd></dd></dl> |
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| 235 | |
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| 236 | <dl class="method"> |
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| 237 | <dt id="sans.models.AddComponent.AddComponent.getParamWithToken"> |
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[c0d873f] | 238 | <tt class="descname">getParamWithToken</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.getParamWithToken" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 239 | <dd></dd></dl> |
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| 240 | |
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| 241 | <dl class="method"> |
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| 242 | <dt id="sans.models.AddComponent.AddComponent.is_fittable"> |
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[c0d873f] | 243 | <tt class="descname">is_fittable</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.is_fittable" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 244 | <dd><p>Check if a given parameter is fittable or not</p> |
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| 245 | <table class="docutils field-list" frame="void" rules="none"> |
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| 246 | <col class="field-name" /> |
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| 247 | <col class="field-body" /> |
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| 248 | <tbody valign="top"> |
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[c0d873f] | 249 | <tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>par_name</strong> – the parameter name to check</td> |
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[512573a] | 250 | </tr> |
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| 251 | </tbody> |
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| 252 | </table> |
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| 253 | </dd></dl> |
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| 254 | |
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| 255 | <dl class="method"> |
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| 256 | <dt id="sans.models.AddComponent.AddComponent.run"> |
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[c0d873f] | 257 | <tt class="descname">run</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.run" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 258 | <dd><p>Evaluate each part of the component and sum the results</p> |
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| 259 | <table class="docutils field-list" frame="void" rules="none"> |
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| 260 | <col class="field-name" /> |
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| 261 | <col class="field-body" /> |
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| 262 | <tbody valign="top"> |
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[c0d873f] | 263 | <tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>x</strong> – input parameter</td> |
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[512573a] | 264 | </tr> |
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[c0d873f] | 265 | <tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">value of the model at x</td> |
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[512573a] | 266 | </tr> |
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| 267 | </tbody> |
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| 268 | </table> |
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| 269 | </dd></dl> |
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| 270 | |
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| 271 | <dl class="method"> |
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| 272 | <dt id="sans.models.AddComponent.AddComponent.runXY"> |
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[c0d873f] | 273 | <tt class="descname">runXY</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.runXY" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 274 | <dd><p>Evaluate each part of the component and sum the results</p> |
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| 275 | <table class="docutils field-list" frame="void" rules="none"> |
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| 276 | <col class="field-name" /> |
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| 277 | <col class="field-body" /> |
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| 278 | <tbody valign="top"> |
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[c0d873f] | 279 | <tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>x</strong> – input parameter</td> |
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[512573a] | 280 | </tr> |
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[c0d873f] | 281 | <tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">value of the model at x</td> |
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[512573a] | 282 | </tr> |
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| 283 | </tbody> |
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| 284 | </table> |
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| 285 | </dd></dl> |
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| 286 | |
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| 287 | <dl class="method"> |
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| 288 | <dt id="sans.models.AddComponent.AddComponent.setParam"> |
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[c0d873f] | 289 | <tt class="descname">setParam</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.setParam" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 290 | <dd><p>Set the value of a model parameter</p> |
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| 291 | <table class="docutils field-list" frame="void" rules="none"> |
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| 292 | <col class="field-name" /> |
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| 293 | <col class="field-body" /> |
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| 294 | <tbody valign="top"> |
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[c0d873f] | 295 | <tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple"> |
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[512573a] | 296 | <li><strong>name</strong> – name of parameter to set</li> |
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| 297 | <li><strong>value</strong> – value to give the paramter</li> |
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| 298 | </ul> |
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| 299 | </td> |
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| 300 | </tr> |
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| 301 | </tbody> |
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| 302 | </table> |
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| 303 | </dd></dl> |
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| 304 | |
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| 305 | <dl class="method"> |
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| 306 | <dt id="sans.models.AddComponent.AddComponent.setParamWithToken"> |
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[c0d873f] | 307 | <tt class="descname">setParamWithToken</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.models.AddComponent.AddComponent.setParamWithToken" title="Permalink to this definition">¶</a></dt> |
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[512573a] | 308 | <dd></dd></dl> |
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| 309 | |
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| 310 | </dd></dl> |
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| 311 | |
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| 312 | </div> |
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| 313 | </div> |
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| 314 | |
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| 315 | |
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| 316 | </div> |
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| 317 | </div> |
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| 318 | </div> |
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| 319 | <div class="sphinxsidebar"> |
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| 320 | <div class="sphinxsidebarwrapper"> |
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| 321 | <h3><a href="../index.html">Table Of Contents</a></h3> |
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| 322 | <ul> |
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| 323 | <li><a class="reference internal" href="#">AddComponent</a><ul> |
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[c0d873f] | 324 | <li><a class="reference internal" href="#sans-models-addcomponent"><tt class="docutils literal"><span class="pre">sans.models.AddComponent</span></tt></a></li> |
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[512573a] | 325 | </ul> |
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| 326 | </li> |
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| 327 | </ul> |
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| 328 | |
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| 329 | <h4>Previous topic</h4> |
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| 330 | <p class="topless"><a href="index.html" |
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| 331 | title="previous chapter">Reference</a></p> |
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| 332 | <h4>Next topic</h4> |
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| 333 | <p class="topless"><a href="BarBellModel.html" |
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| 334 | title="next chapter">BarBellModel</a></p> |
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| 335 | <h3>This Page</h3> |
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| 337 | <li><a href="../_sources/api/AddComponent.txt" |
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| 339 | </ul> |
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| 340 | <div id="searchbox" style="display: none"> |
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| 342 | <form class="search" action="../search.html" method="get"> |
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| 358 | <h3>Navigation</h3> |
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| 361 | <a href="../genindex.html" title="General Index" |
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| 362 | >index</a></li> |
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| 363 | <li class="right" > |
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| 364 | <a href="../py-modindex.html" title="Python Module Index" |
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| 365 | >modules</a> |</li> |
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| 366 | <li class="right" > |
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| 367 | <a href="BarBellModel.html" title="BarBellModel" |
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| 368 | >next</a> |</li> |
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| 369 | <li class="right" > |
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| 370 | <a href="index.html" title="Reference" |
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| 371 | >previous</a> |</li> |
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[c0d873f] | 372 | <li><a href="../index.html">sansmodels 0.1.0 documentation</a> »</li> |
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