[f2d6445] | 1 | #include <cstdlib> |
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| 2 | #include <iostream> |
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| 3 | #include <fstream> |
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| 4 | #include <vector> |
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| 5 | #include "lores_model.h" |
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| 6 | #include "sphere.h" |
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| 7 | #include "cylinder.h" |
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| 8 | #include "ellipsoid.h" |
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| 9 | #include "Point3D.h" |
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| 10 | |
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| 11 | using namespace std; |
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| 12 | |
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| 13 | void test_calculateIQ(LORESModel &lm); |
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| 14 | |
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| 15 | void WritePointsCoor(vector<Point3D> &vp){ |
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| 16 | ofstream outfile("testcc.coor"); |
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| 17 | for(size_t i=0; i<vp.size(); ++i){ |
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| 18 | outfile<<vp[i].getX()<<" "<<vp[i].getY()<<" "<<vp[i].getZ()<<" "<<1.0<<endl; |
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| 19 | } |
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| 20 | } |
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| 21 | |
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| 22 | void test_lores(){ |
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| 23 | |
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| 24 | LORESModel lm(0.5); |
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| 25 | cout << "density is:" << lm.GetDensity() << endl; |
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| 26 | |
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| 27 | Sphere s1(10); |
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| 28 | s1.SetOrientation(10,10,20); |
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| 29 | s1.SetCenter(10,10,10); |
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| 30 | lm.Add(s1,1.0); |
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| 31 | |
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| 32 | Cylinder c1(5,20); |
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| 33 | c1.SetCenter(0,0,0); |
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| 34 | c1.SetOrientation(10,20,30); |
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| 35 | lm.Add(c1,1.0); |
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| 36 | |
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| 37 | /* |
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| 38 | Cylinder c2(40,100); |
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| 39 | c2.SetCenter(-30,-40,-35); |
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| 40 | lm.Add(c2,1.0); |
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| 41 | */ |
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| 42 | /* |
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| 43 | Ellipsoid e1(20,15,10); |
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| 44 | e1.SetCenter(0,0,0); |
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| 45 | e1.SetOrientation(10,10,20); |
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| 46 | lm.Add(e1,1.0); |
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| 47 | */ |
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| 48 | /*test multiple spheres |
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| 49 | int range = 20; |
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| 50 | int r = 5; |
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| 51 | for (int k = 0; k < 1000; ++k) { |
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| 52 | Sphere s(r + rand() % r); |
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| 53 | s.SetCenter(rand() % range, rand() % range, rand() % range); |
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| 54 | lm.Add(s, 1.0); |
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| 55 | } |
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| 56 | */ |
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| 57 | /* |
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| 58 | Sphere s1(10); |
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| 59 | cout << "sphere information:" << s1.GetVolume() << " " << s1.GetRadius() <<endl; |
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| 60 | s1.SetOrientation(10,20,10); |
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| 61 | s1.SetCenter(1,5,2); |
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| 62 | lm.Add(s1,1.0); |
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| 63 | |
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| 64 | Sphere s2(15); |
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| 65 | s2.SetCenter(20,20,20); |
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| 66 | lm.Add(s2,2.0); |
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| 67 | |
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| 68 | Sphere s3(5); |
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| 69 | s3.SetCenter(0,0,0); |
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| 70 | lm.Add(s3,2.0); |
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| 71 | |
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| 72 | Sphere s4(5); |
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| 73 | s4.SetCenter(0,0,10); |
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| 74 | lm.Add(s4,2.0); |
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| 75 | |
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| 76 | Sphere s5(10); |
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| 77 | s5.SetCenter(20,0,0); |
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| 78 | lm.Add(s5,2.0); |
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| 79 | */ |
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| 80 | |
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| 81 | test_calculateIQ(lm); |
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| 82 | } |
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| 83 | |
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| 84 | void test_calculateIQ(LORESModel &lm){ |
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| 85 | |
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| 86 | IQ iq1(10,0.001,0.3); |
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| 87 | cout << "iq information:" << iq1.GetQmin() <<endl; |
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| 88 | |
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| 89 | vector<Point3D> vp; |
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| 90 | lm.GetPoints(vp); |
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| 91 | WritePointsCoor(vp); |
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| 92 | cout << "vp size:" <<vp.size()<<endl; |
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| 93 | cout << "save into pdb file" << endl; |
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| 94 | lm.OutputPDB(vp,"model.pdb"); |
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| 95 | |
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| 96 | // for (vector<Point3D>::iterator iter = vp.begin(); |
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| 97 | // iter != vp.end(); ++iter){ |
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| 98 | // cout << *iter << endl; |
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| 99 | //} |
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| 100 | |
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| 101 | lm.DistDistribution(vp); |
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| 102 | Array2D<double> pr(lm.GetPr()); |
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| 103 | //for(int i = 0; i< pr.dim1(); ++i) |
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| 104 | // cout << pr[i][0] << " " << pr[i][1] << " " << pr[i][2] << endl; |
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| 105 | lm.OutputPR("test.pr"); |
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| 106 | cout << "pass ddfunction, and print out the pr file" <<endl; |
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| 107 | |
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| 108 | lm.CalculateIQ(&iq1); |
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| 109 | cout <<"I(Q): \n" ; |
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| 110 | //for (int i = 0; i< iq1.iq_data.dim1(); i++) |
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| 111 | // cout << iq1.iq_data[i][0]<< " " << iq1.iq_data[i][1] <<endl; |
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| 112 | } |
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| 113 | |
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| 114 | void test_lores2d(){ |
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| 115 | |
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| 116 | LORESModel lm(0.1); |
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| 117 | |
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| 118 | Cylinder c1(5,20); |
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| 119 | c1.SetCenter(0,0,0); |
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| 120 | c1.SetOrientation(10,20,30); |
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| 121 | lm.Add(c1,1.0); |
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| 122 | |
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| 123 | vector<Point3D> vp; |
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| 124 | lm.GetPoints(vp); |
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| 125 | |
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| 126 | lm.DistDistributionXY(vp); |
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| 127 | lm.OutputPR_XY("test2d.pr"); |
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| 128 | |
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| 129 | IQ iq(10,0.001,0.3); |
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| 130 | lm.CalculateIQ_2D(&iq,10); |
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| 131 | |
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| 132 | iq.OutputIQ("test2d.iq"); |
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| 133 | } |
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| 134 | |
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| 135 | void test_lores2d_qxqy(){ |
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| 136 | |
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| 137 | LORESModel lm(0.1); |
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| 138 | |
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| 139 | Cylinder c1(5,20); |
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| 140 | c1.SetCenter(0,0,0); |
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| 141 | c1.SetOrientation(10,20,30); |
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| 142 | lm.Add(c1,1.0); |
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| 143 | |
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| 144 | vector<Point3D> vp; |
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| 145 | lm.GetPoints(vp); |
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| 146 | |
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| 147 | lm.DistDistributionXY(vp); |
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| 148 | |
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| 149 | double aI = lm.CalculateIQ_2D(0.1,0.2); |
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| 150 | |
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| 151 | cout << " a single I is: "<<aI<<" at Qx,Qy = 0.1,0.2" <<endl; |
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| 152 | } |
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| 153 | |
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| 154 | void test_GetCenter() |
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| 155 | { |
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| 156 | LORESModel lm(0.1); |
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| 157 | |
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| 158 | Sphere s1(10); |
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| 159 | s1.SetCenter(-1,-1,-1); |
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| 160 | Sphere s2(20); |
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| 161 | s2.SetCenter(1,1,1); |
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| 162 | |
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| 163 | lm.Add(s1,1.0); |
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| 164 | lm.Add(s2,1.0); |
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| 165 | |
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| 166 | vector<double> center(3); |
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| 167 | center = lm.GetCenter(); |
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| 168 | |
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| 169 | cout << "center should be (0,0,0) after adding two spheres:"<<endl; |
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| 170 | cout << center[0] <<" "<< center[1] <<" "<< center[2]<<endl; |
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| 171 | |
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| 172 | } |
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| 173 | |
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| 174 | void test_CalSingleI(){ |
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| 175 | LORESModel lm(0.1); |
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| 176 | |
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| 177 | Cylinder cyn(10,40); |
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| 178 | |
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| 179 | lm.Add(cyn,1.0); |
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| 180 | |
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| 181 | vector<Point3D> vp; |
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| 182 | lm.GetPoints(vp); |
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| 183 | |
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| 184 | lm.DistDistribution(vp); |
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| 185 | |
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| 186 | double result = lm.CalculateIQ(0.1); |
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| 187 | cout << "The I(0.1) is: " << result << endl; |
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| 188 | } |
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| 189 | |
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| 190 | int main(){ |
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| 191 | |
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| 192 | printf("this\n"); |
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| 193 | cout << "Start" << endl; |
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| 194 | //test_lores(); |
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| 195 | cout <<"testing DistDistributionXY"<<endl; |
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| 196 | test_lores2d(); |
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| 197 | |
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| 198 | cout <<"testing GetCenter (center of the list of shapes)"<<endl; |
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| 199 | test_GetCenter(); |
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| 200 | |
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| 201 | cout <<"testing calculate_2d(Qx,Qy)"<<endl; |
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| 202 | test_lores2d_qxqy(); |
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| 203 | cout << "Pass" << endl; |
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| 204 | |
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| 205 | cout <<"testing CalculateIQ(q)"<<endl; |
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| 206 | test_CalSingleI(); |
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| 207 | |
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| 208 | return 0; |
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| 209 | } |
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