1 | """ |
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2 | Unit tests for fitting module |
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3 | """ |
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4 | import unittest |
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5 | from sans.guitools.plottables import Theory1D |
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6 | from sans.guitools.plottables import Data1D |
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7 | from sans.fit.AbstractFitEngine import Data, Model |
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8 | import math |
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9 | class testFitModule(unittest.TestCase): |
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10 | """ test fitting """ |
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11 | def test1(self): |
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12 | """ Fit 1 data (cyl_testdata.txt)and 1 model(CylinderModel) """ |
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13 | #load data |
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14 | from sans.fit.Loader import Load |
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15 | load = Load() |
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16 | load.set_filename("cyl_testdata.txt") |
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17 | load.set_values() |
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18 | data1 = Data1D(x=[], y=[],dx=None, dy=None) |
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19 | load.load_data(data1) |
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20 | #Importing the Fit module |
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21 | from sans.fit.Fitting import Fit |
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22 | fitter = Fit('scipy') |
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23 | # Receives the type of model for the fitting |
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24 | from sans.models.CylinderModel import CylinderModel |
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25 | model1 = CylinderModel() |
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26 | model1.setParam('contrast',1) |
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27 | data = Data(sans_data=data1 ) |
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28 | model = Model(model1) |
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29 | |
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30 | pars1 =['length','radius','scale'] |
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31 | fitter.set_data(data,1) |
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32 | model.model.setParam('scale',10) |
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33 | fitter.set_model(model,"M1",1,pars1) |
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34 | result1 = fitter.fit() |
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35 | print "test scipy result:",result1.stderr,result1.pvec,result1.fitness |
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36 | self.assert_(result1) |
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37 | self.assertTrue(len(result1.pvec)>0 or len(result1.pvec)==0 ) |
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38 | self.assertTrue(len(result1.stderr)> 0 or len(result1.stderr)==0) |
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39 | self.assertAlmostEquals( result1.pvec[0],0 ) |
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40 | self.assertAlmostEquals( result1.pvec[1],3*math.pow(10,-6) ) |
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41 | self.assertAlmostEquals( result1.pvec[2] , 1 ) |
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42 | self.assertAlmostEquals( result1.pvec[3] , 1 ) |
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43 | self.assertAlmostEquals( result1.pvec[4] , 400 ) |
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44 | self.assertAlmostEquals( result1.pvec[5] , 20 ) |
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45 | self.assertAlmostEquals ( result1.pvec[6] , 1 ) |
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46 | self.assertTrue( result1.fitness/43 < 2 ) |
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47 | |
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48 | |
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