source: sasview/park_integration/src/sans/fit/Fitting.py @ fe10df5

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Last change on this file since fe10df5 was ba7dceb, checked in by Gervaise Alina <gervyh@…>, 13 years ago

prepare fitting engine for multiprocessing

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File size: 3.4 KB
RevLine 
[792db7d5]1"""
[aa36f96]2Class Fit contains ScipyFit and ParkFit methods declaration
3allows to create instance of type ScipyFit or ParkFit to perform either
4a park fit or a scipy fit.
[792db7d5]5"""
[d8a2e31]6
[89f3b66]7#from scipy import optimize
[c4d6900]8from sans.fit.ScipyFitting import ScipyFit
9from sans.fit.ParkFitting import ParkFit
[7705306]10
11
12class Fit:
13    """
[aa36f96]14    Wrap class that allows to select the fitting type.this class
15    can be used as follow : ::
16   
[792db7d5]17        from sans.fit.Fitting import Fit
18        fitter= Fit()
19        fitter.fit_engine('scipy') or fitter.fit_engine('park')
20        engine = fitter.returnEngine()
[c4d6900]21        engine.set_data(data,id)
[792db7d5]22        engine.set_param( model,model.name, pars)
[c4d6900]23        engine.set_model(model,id)
[393f0f3]24       
[792db7d5]25        chisqr1, out1, cov1=engine.fit(pars,qmin,qmax)
[aa36f96]26       
[7705306]27    """ 
[93f0a586]28    def __init__(self, engine='scipy'):
[792db7d5]29        """
30        """
[aa36f96]31        #self._engine will contain an instance of ScipyFit or ParkFit
[20d30e9]32        self._engine = None
[93f0a586]33        self.set_engine(engine)
[7705306]34         
[89f3b66]35    def set_engine(self, word):
[7705306]36        """
[aa36f96]37        Select the type of Fit
38       
39        :param word: the keyword to select the fit type
40       
41        :raise: if the user does not enter 'scipy' or 'park',
42             a valueError is raised
43             
[7705306]44        """
[89f3b66]45        if word == "scipy":
46            self._engine = ScipyFit()
47        elif word == "park":
[c4d6900]48            self._engine = ParkFit()
[7705306]49        else:
50            raise ValueError, "enter the keyword scipy or park"
[aa36f96]51
[ba7dceb]52    def fit(self, msg_q=None, q=None, handler=None, 
[7db52f1]53                        curr_thread=None, 
54                        ftol=1.49012e-8,
55                        reset_flag=False):
[792db7d5]56        """Perform the fit """
[ba7dceb]57        return self._engine.fit(msg_q=msg_q, 
58                                q=q, handler=handler, curr_thread=curr_thread,
[7db52f1]59                                ftol=ftol, reset_flag=reset_flag)
[511c6810]60     
[634ca14]61    def set_model(self, model, id, pars=[], constraints=[], data=None):
[20d30e9]62        """
[c4d6900]63        store a model model to fit at the position id of the fit engine
[20d30e9]64        """
[634ca14]65        self._engine.set_model(model, id, pars, constraints, data=data)
[20d30e9]66   
[c4d6900]67    def set_data(self, data, id, smearer=None, qmin=None, qmax=None):
[20d30e9]68        """
[c4d6900]69        Store data to fit at the psotion id of the fit engine
[aa36f96]70       
71        :param data: data to fit
72        :param smearer: smearerobject to smear data
73        :param qmin: the minimum q range to fit
74        :param qmax: the minimum q range to fit
75       
[20d30e9]76        """
[c4d6900]77        self._engine.set_data(data, id, smearer, qmin, qmax)
[ca6d914]78       
[c4d6900]79    def get_model(self, id):
[7705306]80        """ return list of data"""
[c4d6900]81        self._engine.get_model(id)
[9855699]82
[20d30e9]83
[c4d6900]84    def remove_fit_problem(self, id):
85        """remove fitarrange in id"""
86        self._engine.remove_fit_problem(id)
[ca6d914]87       
[c4d6900]88    def select_problem_for_fit(self, id, value):
[a9e04aa]89        """
[c4d6900]90        select a couple of model and data at the id position in dictionary
[aa36f96]91        and set in self.selected value to value
92       
93        :param value: the value to allow fitting.
94             can only have the value one or zero
[a9e04aa]95        """
[c4d6900]96        self._engine.select_problem_for_fit(id, value)
[20d30e9]97       
[c4d6900]98    def get_problem_to_fit(self, id):
[a9e04aa]99        """
[c4d6900]100        return the self.selected value of the fit problem of id
[aa36f96]101           
[c4d6900]102        :param id: the id of the problem
[aa36f96]103       
[a9e04aa]104        """
[c4d6900]105        return self._engine.get_problem_to_fit(id)
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