[7705306] | 1 | #class Fitting |
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| 2 | from sans.guitools.plottables import Data1D |
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| 3 | from Loader import Load |
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| 4 | from scipy import optimize |
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| 5 | from ScipyFitting import ScipyFit |
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| 6 | from ParkFitting import ParkFit |
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| 7 | |
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| 8 | |
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| 9 | class Fit: |
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| 10 | """ |
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| 11 | Wrap class that allows to select the fitting type |
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| 12 | """ |
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| 13 | def __init__(self): |
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| 14 | |
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| 15 | # To initialize a type of Fit |
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| 16 | self._engine=None |
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| 17 | |
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| 18 | def fit_engine(self,word): |
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| 19 | """ |
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| 20 | Select the type of Fit |
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| 21 | @param word: the keyword to select the fit type |
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| 22 | """ |
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| 23 | if word=="scipy": |
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| 24 | self._engine=ScipyFit() |
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| 25 | elif word=="park": |
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| 26 | self._engine=ParkFit() |
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| 27 | else: |
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| 28 | raise ValueError, "enter the keyword scipy or park" |
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| 29 | def returnEngine(self): |
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| 30 | return self._engine |
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| 31 | |
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| 32 | def fit(self,pars, qmin=None, qmax=None): |
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| 33 | """ Do the fit """ |
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| 34 | |
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| 35 | def set_model(self,model,Uid): |
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| 36 | """ Set model """ |
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| 37 | |
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| 38 | def set_data(self,data,Uid): |
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| 39 | """ Receive plottable and create a list of data to fit""" |
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| 40 | |
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| 41 | def get_model(self,Uid): |
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| 42 | """ return list of data""" |
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| 43 | |
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| 44 | def set_param(self,model, pars): |
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| 45 | """ Recieve a dictionary of parameter and save it """ |
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| 46 | |
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| 47 | def add_constraint(self, constraint): |
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| 48 | """ User specify contraint to fit """ |
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| 49 | |
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| 50 | def get_constraint(self): |
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| 51 | """ return the contraint value """ |
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| 52 | |
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| 53 | def set_constraint(self,constraint): |
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| 54 | """ |
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| 55 | receive a string as a constraint |
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| 56 | @param constraint: a string used to constraint some parameters to get a |
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| 57 | specific value |
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| 58 | """ |
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| 59 | if __name__ == "__main__": |
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| 60 | load= Load() |
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| 61 | # test scipy |
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| 62 | """test fit one data set one model with scipy """ |
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| 63 | #load data |
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| 64 | load.set_filename("testdata_line.txt") |
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| 65 | load.set_values() |
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| 66 | data1 = Data1D(x=[], y=[], dx=None,dy=None) |
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| 67 | data1.name = "data1" |
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| 68 | load.load_data(data1) |
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| 69 | #choose a model |
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| 70 | from sans.guitools.LineModel import LineModel |
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| 71 | model = LineModel() |
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| 72 | #Create a Fit engine |
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| 73 | fitter =Fit() |
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| 74 | fitter.fit_engine('scipy') |
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| 75 | engine = fitter.returnEngine() |
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| 76 | |
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| 77 | #set the model |
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| 78 | engine.set_model(model,1) |
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| 79 | engine.set_data(data1,1) |
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| 80 | |
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| 81 | print"fit only one data SCIPY:",engine.fit({'A':2,'B':1},None,None) |
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| 82 | |
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| 83 | |
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| 84 | """ test fit one data set one model with park """ |
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| 85 | fitter.fit_engine('scipy') |
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| 86 | engine = fitter.returnEngine() |
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| 87 | #set the model |
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| 88 | engine.set_model(model,1) |
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| 89 | engine.set_data(data1,1) |
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| 90 | |
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| 91 | print"fit only one data PARK:",engine.fit({'A':2,'B':1},None,None) |
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| 92 | |
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| 93 | |
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| 94 | """test fit with 2 data and one model SCIPY:""" |
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| 95 | # reinitialize the fitter |
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| 96 | fitter =Fit() |
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| 97 | #create an engine |
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| 98 | fitter.fit_engine("scipy") |
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| 99 | engine=fitter.returnEngine() |
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| 100 | #set the model for fit |
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| 101 | engine.set_model(model,2 ) |
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| 102 | #load 1 st data |
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| 103 | load.set_filename("testdata1.txt") |
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| 104 | load.set_values() |
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| 105 | data2 = Data1D(x=[], y=[], dx=None,dy=None) |
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| 106 | data2.name = "data2" |
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| 107 | load.load_data(data2) |
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| 108 | #load 2nd data |
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| 109 | load.set_filename("testdata2.txt") |
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| 110 | load.set_values() |
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| 111 | data3 = Data1D(x=[], y=[], dx=None,dy=None) |
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| 112 | data3.name = "data2" |
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| 113 | load.load_data(data3) |
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| 114 | |
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| 115 | #set data in the engine |
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| 116 | engine.set_data(data2,2) |
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| 117 | engine.set_data(data3,2) |
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| 118 | print"fit two data SCIPY:",engine.fit({'A':2,'B':1},None,None) |
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| 119 | |
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| 120 | """ test fit with 2 data and one model PARK:""" |
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| 121 | fitter.fit_engine("park") |
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| 122 | engine=fitter.returnEngine() |
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| 123 | #set the model for fit |
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| 124 | engine.set_model(model,2 ) |
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| 125 | #load 1 st data |
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| 126 | load.set_filename("testdata1.txt") |
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| 127 | load.set_values() |
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| 128 | data2 = Data1D(x=[], y=[], dx=None,dy=None) |
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| 129 | data2.name = "data2" |
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| 130 | load.load_data(data2) |
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| 131 | #load 2nd data |
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| 132 | load.set_filename("testdata2.txt") |
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| 133 | load.set_values() |
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| 134 | data3 = Data1D(x=[], y=[], dx=None,dy=None) |
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| 135 | data3.name = "data2" |
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| 136 | load.load_data(data3) |
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| 137 | |
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| 138 | #set data in the engine |
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| 139 | engine.set_data(data2,2) |
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| 140 | engine.set_data(data3,2) |
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| 141 | print"fit two data PARK:",engine.fit({'A':2,'B':1},None,None) |
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| 142 | |
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| 143 | |
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