[c128284] | 1 | |
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| 2 | |
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[d7a39e5] | 3 | |
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| 4 | ################################################################################ |
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| 5 | #This software was developed by the University of Tennessee as part of the |
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| 6 | #Distributed Data Analysis of Neutron Scattering Experiments (DANSE) |
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| 7 | #project funded by the US National Science Foundation. |
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| 8 | # |
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| 9 | #See the license text in license.txt |
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| 10 | # |
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| 11 | #copyright 2009, University of Tennessee |
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| 12 | ################################################################################ |
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[d65a00a] | 13 | |
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| 14 | |
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[4e1c362] | 15 | import sys |
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[272d91e] | 16 | import wx |
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[4e1c362] | 17 | import copy |
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[4a2b054] | 18 | import logging |
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[d65a00a] | 19 | |
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[a07e72f] | 20 | from sans.guiframe.dataFitting import Data1D |
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[f1e06a8e] | 21 | from sans.guiframe.events import NewPlotEvent |
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[9cec2dd] | 22 | from sans.guiframe.events import StatusEvent |
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[a07e72f] | 23 | from sans.guiframe.gui_style import GUIFRAME_ID |
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[f1e06a8e] | 24 | from .invariant_state import Reader as reader |
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[a60b8b6] | 25 | from sans.dataloader.loader import Loader |
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[f1e06a8e] | 26 | from .invariant_panel import InvariantPanel |
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[d65a00a] | 27 | from sans.guiframe.plugin_base import PluginBase |
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| 28 | |
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| 29 | class Plugin(PluginBase): |
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[c128284] | 30 | """ |
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[d7a39e5] | 31 | This class defines the interface for invariant Plugin class |
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[4e1c362] | 32 | that can be used by the gui_manager. |
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[c128284] | 33 | """ |
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| 34 | |
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| 35 | def __init__(self, standalone=False): |
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[d65a00a] | 36 | PluginBase.__init__(self, name="Invariant", standalone=standalone) |
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[c128284] | 37 | |
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| 38 | #dictionary containing data name and error on dy of that data |
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| 39 | self.err_dy = {} |
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[d65a00a] | 40 | |
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[4da35bc] | 41 | #default state objects |
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| 42 | self.state_reader = None |
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[35f2f49] | 43 | self._extensions = '.inv' |
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[4da35bc] | 44 | self.temp_state = None |
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| 45 | self.__data = None |
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[d65a00a] | 46 | |
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[4e1c362] | 47 | # Log startup |
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| 48 | logging.info("Invariant plug-in started") |
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[c128284] | 49 | |
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[f29a433] | 50 | def help(self, evt): |
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| 51 | """ |
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[d7a39e5] | 52 | Show a general help dialog. |
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[f29a433] | 53 | """ |
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[64b4f0f] | 54 | from help_panel import HelpWindow |
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| 55 | frame = HelpWindow(None, -1) |
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| 56 | if hasattr(frame, "IsIconized"): |
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| 57 | if not frame.IsIconized(): |
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| 58 | try: |
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| 59 | icon = self.parent.GetIcon() |
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| 60 | frame.SetIcon(icon) |
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| 61 | except: |
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| 62 | pass |
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[f29a433] | 63 | frame.Show(True) |
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| 64 | |
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[35f2f49] | 65 | def get_data(self): |
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| 66 | """ |
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| 67 | """ |
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| 68 | return self.__data |
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| 69 | |
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[c128284] | 70 | def get_panels(self, parent): |
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| 71 | """ |
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[d7a39e5] | 72 | Create and return the list of wx.Panels for your plug-in. |
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| 73 | Define the plug-in perspective. |
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| 74 | |
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| 75 | Panels should inherit from DefaultPanel defined below, |
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| 76 | or should present the same interface. They must define |
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| 77 | "window_caption" and "window_name". |
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| 78 | |
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| 79 | :param parent: parent window |
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| 80 | |
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| 81 | :return: list of panels |
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[c128284] | 82 | """ |
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| 83 | ## Save a reference to the parent |
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| 84 | self.parent = parent |
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| 85 | self.invariant_panel = InvariantPanel(parent=self.parent) |
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| 86 | self.invariant_panel.set_manager(manager=self) |
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[4e1c362] | 87 | self.perspective.append(self.invariant_panel.window_name) |
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| 88 | #Create reader when fitting panel are created |
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| 89 | self.state_reader = reader(self.set_state) |
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| 90 | #append that reader to list of available reader |
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| 91 | loader = Loader() |
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| 92 | loader.associate_file_reader(".inv", self.state_reader) |
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[ca430a0] | 93 | #loader.associate_file_reader(".svs", self.state_reader) |
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[c128284] | 94 | # Return the list of panels |
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| 95 | return [self.invariant_panel] |
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[d65a00a] | 96 | |
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[a07e72f] | 97 | def get_context_menu(self, plotpanel=None): |
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[c128284] | 98 | """ |
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[d7a39e5] | 99 | This method is optional. |
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| 100 | |
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| 101 | When the context menu of a plot is rendered, the |
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| 102 | get_context_menu method will be called to give you a |
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| 103 | chance to add a menu item to the context menu. |
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| 104 | |
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| 105 | A ref to a Graph object is passed so that you can |
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| 106 | investigate the plot content and decide whether you |
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| 107 | need to add items to the context menu. |
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| 108 | |
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| 109 | This method returns a list of menu items. |
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| 110 | Each item is itself a list defining the text to |
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| 111 | appear in the menu, a tool-tip help text, and a |
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| 112 | call-back method. |
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| 113 | |
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| 114 | :param graph: the Graph object to which we attach the context menu |
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| 115 | |
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| 116 | :return: a list of menu items with call-back function |
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[c128284] | 117 | """ |
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[a07e72f] | 118 | graph = plotpanel.graph |
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[c128284] | 119 | invariant_option = "Compute invariant" |
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[4a2b054] | 120 | invariant_hint = "Will displays the invariant panel for" |
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[76e894c] | 121 | invariant_hint += " further computation" |
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[4e1c362] | 122 | |
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[a07e72f] | 123 | if graph.selected_plottable not in plotpanel.plots: |
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| 124 | return [] |
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| 125 | data = plotpanel.plots[graph.selected_plottable] |
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[c128284] | 126 | |
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[ec1584e] | 127 | if issubclass(data.__class__, Data1D): |
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| 128 | if data.name != "$I_{obs}(q)$" and data.name != " $P_{fit}(r)$": |
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| 129 | return [[invariant_option, invariant_hint, |
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[a07e72f] | 130 | self._compute_invariant]] |
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| 131 | return [] |
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| 132 | |
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[c128284] | 133 | def _compute_invariant(self, event): |
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| 134 | """ |
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[d7a39e5] | 135 | Open the invariant panel to invariant computation |
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[c128284] | 136 | """ |
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| 137 | self.panel = event.GetEventObject() |
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[4a2b054] | 138 | Plugin.on_perspective(self, event=event) |
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[a07e72f] | 139 | id = self.panel.graph.selected_plottable |
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| 140 | data = self.panel.plots[self.panel.graph.selected_plottable] |
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| 141 | if data is None: |
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| 142 | return |
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| 143 | if not issubclass(data.__class__, Data1D): |
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| 144 | name = data.__class__.__name__ |
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| 145 | msg = "Invariant use only Data1D got: [%s] " % str(name) |
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| 146 | raise ValueError, msg |
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| 147 | self.compute_helper(data=data) |
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[4e1c362] | 148 | |
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[e88ebfd] | 149 | def set_data(self, data_list=None): |
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[f1e06a8e] | 150 | """ |
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| 151 | receive a list of data and compute invariant |
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| 152 | """ |
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[9cec2dd] | 153 | msg = "" |
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[a07e72f] | 154 | data = None |
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[14cd91b1] | 155 | if data_list is None: |
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| 156 | data_list = [] |
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[e88ebfd] | 157 | if len(data_list) >= 1: |
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| 158 | if len(data_list) == 1: |
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| 159 | data = data_list[0] |
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| 160 | else: |
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[9cec2dd] | 161 | data_1d_list = [] |
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| 162 | data_2d_list = [] |
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| 163 | error_msg = "" |
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| 164 | # separate data into data1d and data2d list |
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| 165 | for data in data_list: |
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| 166 | if data is not None: |
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| 167 | if issubclass(data.__class__, Data1D): |
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| 168 | data_1d_list.append(data) |
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| 169 | else: |
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| 170 | error_msg += " %s type %s \n" % (str(data.name), |
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| 171 | str(data.__class__.__name__)) |
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| 172 | data_2d_list.append(data) |
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| 173 | if len(data_2d_list) > 0: |
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| 174 | msg = "Invariant does not support the following data types:\n" |
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| 175 | msg += error_msg |
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| 176 | if len(data_1d_list) == 0: |
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| 177 | wx.PostEvent(self.parent, |
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| 178 | StatusEvent(status=msg, info='error')) |
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| 179 | return |
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| 180 | msg += "Invariant panel does not allow multiple data!\n" |
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[e88ebfd] | 181 | msg += "Please select one.\n" |
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[6813da7d] | 182 | if len(data_list) > 1: |
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| 183 | from invariant_widgets import DataDialog |
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| 184 | dlg = DataDialog(data_list=data_1d_list, text=msg) |
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| 185 | if dlg.ShowModal() == wx.ID_OK: |
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| 186 | data = dlg.get_data() |
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| 187 | else: |
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| 188 | data = None |
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| 189 | dlg.Destroy() |
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| 190 | |
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[e88ebfd] | 191 | if data is None: |
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[9cec2dd] | 192 | msg += "invariant receives no data. \n" |
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| 193 | wx.PostEvent(self.parent, |
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| 194 | StatusEvent(status=msg, info='error')) |
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[e88ebfd] | 195 | return |
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[9cec2dd] | 196 | if not issubclass(data.__class__, Data1D): |
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| 197 | msg += "invariant cannot be computed for data of " |
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| 198 | msg += "type %s\n" % (data.__class__.__name__) |
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| 199 | wx.PostEvent(self.parent, |
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| 200 | StatusEvent(status=msg, info='error')) |
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| 201 | return |
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| 202 | else: |
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[e88ebfd] | 203 | wx.PostEvent(self.parent, NewPlotEvent(plot=data, |
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| 204 | title=data.title)) |
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| 205 | try: |
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| 206 | self.compute_helper(data) |
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| 207 | except: |
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[9cec2dd] | 208 | msg = "Invariant Set_data: " + str(sys.exc_value) |
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[e88ebfd] | 209 | wx.PostEvent(self.parent, StatusEvent(status=msg, |
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| 210 | info="error")) |
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[a07e72f] | 211 | else: |
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| 212 | msg = "invariant cannot be computed for data of " |
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| 213 | msg += "type %s" % (data.__class__.__name__) |
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| 214 | wx.PostEvent(self.parent, |
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| 215 | StatusEvent(status=msg, info='error')) |
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[20b482f] | 216 | def delete_data(self, data_id): |
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| 217 | """ |
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| 218 | """ |
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[b24cfd9] | 219 | if self.__data is None: |
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| 220 | return |
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[20b482f] | 221 | for id in data_id: |
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| 222 | if id == self.__data.id: |
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| 223 | self.clear_panel() |
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| 224 | |
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[cb69775] | 225 | def clear_panel(self): |
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[a07e72f] | 226 | """ |
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| 227 | """ |
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[cb69775] | 228 | self.invariant_panel.clear_panel() |
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| 229 | |
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[343fdb6] | 230 | def compute_helper(self, data): |
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| 231 | """ |
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| 232 | """ |
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| 233 | if data is None: |
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| 234 | return |
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[f24925ab] | 235 | # set current data if not it's a state data |
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| 236 | if not self.invariant_panel.is_state_data: |
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[9c1f463] | 237 | # Store reference to data |
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| 238 | self.__data = data |
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| 239 | # Set the data set to be user for invariant calculation |
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[210ff4f] | 240 | self.invariant_panel.set_data(data=data) |
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[f1e06a8e] | 241 | |
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[4e1c362] | 242 | def save_file(self, filepath, state=None): |
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| 243 | """ |
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| 244 | Save data in provided state object. |
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| 245 | |
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| 246 | :param filepath: path of file to write to |
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| 247 | :param state: invariant state |
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| 248 | """ |
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| 249 | # Write the state to file |
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| 250 | # First, check that the data is of the right type |
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| 251 | current_plottable = self.__data |
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| 252 | |
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[d4d78c9] | 253 | if issubclass(current_plottable.__class__, Data1D): |
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[4e1c362] | 254 | self.state_reader.write(filepath, current_plottable, state) |
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| 255 | else: |
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[4a2b054] | 256 | msg = "invariant.save_file: the data being saved is" |
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[a60b8b6] | 257 | msg += " not a sans.dataloader.data_info.Data1D object" |
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[4a2b054] | 258 | raise RuntimeError, msg |
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[4e1c362] | 259 | |
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[75fbd17] | 260 | def set_state(self, state=None, datainfo=None): |
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[4e1c362] | 261 | """ |
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| 262 | Call-back method for the state reader. |
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[9b18735] | 263 | This method is called when a .inv/.svs file is loaded. |
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[4e1c362] | 264 | |
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| 265 | :param state: State object |
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| 266 | """ |
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[4da35bc] | 267 | self.temp_state = None |
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[4e1c362] | 268 | try: |
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[75fbd17] | 269 | if datainfo.__class__.__name__ == 'list': |
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| 270 | data = datainfo[0] |
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[cb69775] | 271 | else: |
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| 272 | data = datainfo |
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[75fbd17] | 273 | if data is None: |
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[4a2b054] | 274 | msg = "invariant.set_state: datainfo parameter cannot" |
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| 275 | msg += " be None in standalone mode" |
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| 276 | raise RuntimeError, msg |
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[04295ea] | 277 | # Make sure the user sees the invariant panel after loading |
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| 278 | #self.parent.set_perspective(self.perspective) |
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| 279 | self.on_perspective(event=None) |
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[75fbd17] | 280 | name = data.meta_data['invstate'].file |
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| 281 | data.meta_data['invstate'].file = name |
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| 282 | data.name = name |
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| 283 | data.filename = name |
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[04295ea] | 284 | |
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[cb69775] | 285 | data = self.parent.create_gui_data(data,None) |
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[75fbd17] | 286 | self.__data = data |
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| 287 | wx.PostEvent(self.parent, NewPlotEvent(plot=self.__data, |
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| 288 | reset=True, title=self.__data.title)) |
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[2f97794] | 289 | data_dict = {self.__data.id:self.__data} |
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| 290 | self.parent.add_data(data_list=data_dict) |
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[f24925ab] | 291 | # set state |
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| 292 | self.invariant_panel.is_state_data = True |
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[9b18735] | 293 | |
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| 294 | # Load the invariant states |
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[cb69775] | 295 | self.temp_state = state |
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[04295ea] | 296 | # Requires to have self.__data and self.temp_state first. |
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| 297 | self.on_set_state_helper(None) |
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[cefb3fb] | 298 | |
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[75fbd17] | 299 | except: |
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[4e1c362] | 300 | logging.error("invariant.set_state: %s" % sys.exc_value) |
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[4da35bc] | 301 | |
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[9b18735] | 302 | def on_set_state_helper(self, event=None): |
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[4da35bc] | 303 | """ |
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[9b18735] | 304 | Set the state when called by EVT_STATE_UPDATE event from guiframe |
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| 305 | after a .inv/.svs file is loaded |
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[4da35bc] | 306 | """ |
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[4a2b054] | 307 | self.invariant_panel.set_state(state=self.temp_state, |
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| 308 | data=self.__data) |
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[4da35bc] | 309 | self.temp_state = None |
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[c128284] | 310 | |
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[9b18735] | 311 | |
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[2661d8b] | 312 | def plot_theory(self, data=None, name=None): |
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[c128284] | 313 | """ |
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[d7a39e5] | 314 | Receive a data set and post a NewPlotEvent to parent. |
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| 315 | |
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| 316 | :param data: extrapolated data to be plotted |
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| 317 | :param name: Data's name to use for the legend |
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[c128284] | 318 | """ |
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[4a2b054] | 319 | #import copy |
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[2661d8b] | 320 | if data is None: |
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[a07e72f] | 321 | id = str(self.__data.id) + name |
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[e88ebfd] | 322 | group_id = self.__data.group_id |
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[a07e72f] | 323 | wx.PostEvent(self.parent, NewPlotEvent(id=id, |
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| 324 | group_id=group_id, |
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[c85c180] | 325 | action='Remove')) |
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[a07e72f] | 326 | return |
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| 327 | |
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| 328 | new_plot = Data1D(x=[], y=[], dy=None) |
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| 329 | new_plot.symbol = GUIFRAME_ID.CURVE_SYMBOL_NUM |
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| 330 | scale = self.invariant_panel.get_scale() |
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| 331 | background = self.invariant_panel.get_background() |
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| 332 | |
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| 333 | if scale != 0: |
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| 334 | # Put back the sacle and bkg for plotting |
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| 335 | data.y = (data.y + background)/scale |
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| 336 | new_plot = Data1D(x=data.x, y=data.y, dy=None) |
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| 337 | new_plot.symbol = GUIFRAME_ID.CURVE_SYMBOL_NUM |
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[2661d8b] | 338 | else: |
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[a07e72f] | 339 | msg = "Scale can not be zero." |
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| 340 | raise ValueError, msg |
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| 341 | if len(new_plot.x)== 0 : |
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| 342 | return |
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| 343 | |
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[c128284] | 344 | new_plot.name = name |
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[2661d8b] | 345 | new_plot.xaxis(self.__data._xaxis, self.__data._xunit) |
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| 346 | new_plot.yaxis(self.__data._yaxis, self.__data._yunit) |
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| 347 | new_plot.group_id = self.__data.group_id |
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[a07e72f] | 348 | new_plot.id = str(self.__data.id) + name |
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[f1e06a8e] | 349 | new_plot.title = self.__data.title |
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[4e1c362] | 350 | # Save theory_data in a state |
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| 351 | if data != None: |
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| 352 | name_head = name.split('-') |
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[4a2b054] | 353 | if name_head[0] == 'Low': |
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[4e1c362] | 354 | self.invariant_panel.state.theory_lowQ = copy.deepcopy(new_plot) |
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[4a2b054] | 355 | elif name_head[0] == 'High': |
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[f1e06a8e] | 356 | self.invariant_panel.state.theory_highQ =copy.deepcopy(new_plot) |
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[c85c180] | 357 | |
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[27f4bee] | 358 | self.parent.update_theory(data_id=self.__data.id, theory=new_plot) |
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[4a2b054] | 359 | wx.PostEvent(self.parent, NewPlotEvent(plot=new_plot, |
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[f1e06a8e] | 360 | title=self.__data.title)) |
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[6d55d81] | 361 | |
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[18d0bba] | 362 | def plot_data(self, scale, background): |
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[6d55d81] | 363 | """ |
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[d7a39e5] | 364 | replot the current data if the user enters a new scale or background |
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[6d55d81] | 365 | """ |
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[18d0bba] | 366 | new_plot = scale * self.__data - background |
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| 367 | new_plot.name = self.__data.name |
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| 368 | new_plot.group_id = self.__data.group_id |
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| 369 | new_plot.id = self.__data.id |
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[f1e06a8e] | 370 | new_plot.title = self.__data.title |
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[4e1c362] | 371 | |
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| 372 | # Save data in a state: but seems to never happen |
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| 373 | if new_plot != None: |
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| 374 | self.invariant_panel.state.data = copy.deepcopy(new_plot) |
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[4a2b054] | 375 | wx.PostEvent(self.parent, NewPlotEvent(plot=new_plot, |
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[f1e06a8e] | 376 | title=new_plot.title)) |
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[c128284] | 377 | |
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