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| 3 | |
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| 4 | ################################################################################ |
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| 5 | #This software was developed by the University of Tennessee as part of the |
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| 6 | #Distributed Data Analysis of Neutron Scattering Experiments (DANSE) |
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| 7 | #project funded by the US National Science Foundation. |
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| 8 | # |
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| 9 | #See the license text in license.txt |
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| 10 | # |
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| 11 | #copyright 2009, University of Tennessee |
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| 12 | ################################################################################ |
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| 13 | |
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| 14 | |
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| 15 | import sys |
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| 16 | import wx |
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| 17 | import copy |
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| 18 | import logging |
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| 19 | |
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| 20 | from DataLoader.data_info import Data1D as LoaderData1D |
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| 21 | from sans.guiframe.dataFitting import Theory1D |
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| 22 | from sans.guiframe.dataFitting import Data1D |
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| 23 | |
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| 24 | from sans.guiframe.events import NewPlotEvent |
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| 25 | from sans.guiframe.events import ERR_DATA |
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| 26 | from .invariant_state import Reader as reader |
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| 27 | from DataLoader.loader import Loader |
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| 28 | from .invariant_panel import InvariantPanel |
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| 29 | #from sans.guiframe.events import EVT_INVSTATE_UPDATE |
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| 30 | |
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| 31 | from sans.guiframe.plugin_base import PluginBase |
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| 32 | |
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| 33 | class Plugin(PluginBase): |
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| 34 | """ |
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| 35 | This class defines the interface for invariant Plugin class |
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| 36 | that can be used by the gui_manager. |
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| 37 | """ |
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| 38 | |
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| 39 | def __init__(self, standalone=False): |
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| 40 | PluginBase.__init__(self, name="Invariant", standalone=standalone) |
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| 41 | |
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| 42 | #dictionary containing data name and error on dy of that data |
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| 43 | self.err_dy = {} |
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| 44 | |
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| 45 | #default state objects |
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| 46 | self.state_reader = None |
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| 47 | self._extensions = '.inv' |
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| 48 | self.temp_state = None |
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| 49 | self.__data = None |
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| 50 | |
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| 51 | # Log startup |
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| 52 | logging.info("Invariant plug-in started") |
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| 53 | |
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| 54 | def help(self, evt): |
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| 55 | """ |
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| 56 | Show a general help dialog. |
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| 57 | """ |
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| 58 | from .help_panel import HelpWindow |
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| 59 | frame = HelpWindow(None, -1) |
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| 60 | frame.Show(True) |
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| 61 | |
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| 62 | def get_data(self): |
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| 63 | """ |
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| 64 | """ |
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| 65 | return self.__data |
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| 66 | |
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| 67 | def get_panels(self, parent): |
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| 68 | """ |
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| 69 | Create and return the list of wx.Panels for your plug-in. |
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| 70 | Define the plug-in perspective. |
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| 71 | |
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| 72 | Panels should inherit from DefaultPanel defined below, |
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| 73 | or should present the same interface. They must define |
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| 74 | "window_caption" and "window_name". |
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| 75 | |
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| 76 | :param parent: parent window |
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| 77 | |
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| 78 | :return: list of panels |
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| 79 | """ |
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| 80 | ## Save a reference to the parent |
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| 81 | self.parent = parent |
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| 82 | #add error back to the data |
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| 83 | self.parent.Bind(ERR_DATA, self._on_data_error) |
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| 84 | #self.parent.Bind(EVT_INVSTATE_UPDATE, self.on_set_state_helper) |
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| 85 | |
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| 86 | self.invariant_panel = InvariantPanel(parent=self.parent) |
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| 87 | self.invariant_panel.set_manager(manager=self) |
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| 88 | self.perspective.append(self.invariant_panel.window_name) |
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| 89 | #Create reader when fitting panel are created |
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| 90 | self.state_reader = reader(self.set_state) |
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| 91 | #append that reader to list of available reader |
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| 92 | loader = Loader() |
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| 93 | loader.associate_file_reader(".inv", self.state_reader) |
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| 94 | loader.associate_file_reader(".svs", self.state_reader) |
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| 95 | # Return the list of panels |
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| 96 | return [self.invariant_panel] |
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| 97 | |
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| 98 | def get_context_menu(self, graph=None): |
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| 99 | """ |
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| 100 | This method is optional. |
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| 101 | |
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| 102 | When the context menu of a plot is rendered, the |
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| 103 | get_context_menu method will be called to give you a |
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| 104 | chance to add a menu item to the context menu. |
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| 105 | |
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| 106 | A ref to a Graph object is passed so that you can |
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| 107 | investigate the plot content and decide whether you |
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| 108 | need to add items to the context menu. |
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| 109 | |
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| 110 | This method returns a list of menu items. |
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| 111 | Each item is itself a list defining the text to |
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| 112 | appear in the menu, a tool-tip help text, and a |
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| 113 | call-back method. |
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| 114 | |
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| 115 | :param graph: the Graph object to which we attach the context menu |
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| 116 | |
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| 117 | :return: a list of menu items with call-back function |
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| 118 | """ |
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| 119 | self.graph = graph |
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| 120 | invariant_option = "Compute invariant" |
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| 121 | invariant_hint = "Will displays the invariant panel for" |
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| 122 | invariant_hint += " futher computation" |
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| 123 | |
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| 124 | for item in self.graph.plottables: |
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| 125 | if item.name == graph.selected_plottable : |
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| 126 | if issubclass(item.__class__, LoaderData1D): |
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| 127 | |
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| 128 | if item.name != "$I_{obs}(q)$" and \ |
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| 129 | item.name != " $P_{fit}(r)$": |
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| 130 | if hasattr(item, "group_id"): |
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| 131 | return [[invariant_option, |
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| 132 | invariant_hint, |
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| 133 | self._compute_invariant]] |
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| 134 | return [] |
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| 135 | |
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| 136 | def copy_data(self, item, dy=None): |
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| 137 | """ |
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| 138 | receive a data 1D and the list of errors on dy |
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| 139 | and create a new data1D data |
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| 140 | """ |
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| 141 | id = None |
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| 142 | if hasattr(item,"id"): |
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| 143 | id = item.id |
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| 144 | |
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| 145 | data = Data1D(x=item.x, y=item.y, dx=None, dy=None) |
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| 146 | data.copy_from_datainfo(item) |
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| 147 | item.clone_without_data(clone=data) |
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| 148 | data.dy = dy |
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| 149 | data.name = item.name |
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| 150 | data.title = item.title |
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| 151 | |
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| 152 | ## allow to highlight data when plotted |
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| 153 | data.interactive = item.interactive |
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| 154 | ## when 2 data have the same id override the 1 st plotted |
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| 155 | data.id = id |
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| 156 | data.group_id = item.group_id |
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| 157 | return data |
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| 158 | |
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| 159 | def _on_data_error(self, event): |
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| 160 | """ |
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| 161 | receives and event from plotting plu-gins to store the data name and |
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| 162 | their errors of y coordinates for 1Data hide and show error |
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| 163 | """ |
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| 164 | self.err_dy = event.err_dy |
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| 165 | |
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| 166 | def _compute_invariant(self, event): |
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| 167 | """ |
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| 168 | Open the invariant panel to invariant computation |
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| 169 | """ |
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| 170 | self.panel = event.GetEventObject() |
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| 171 | Plugin.on_perspective(self, event=event) |
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| 172 | for plottable in self.panel.graph.plottables: |
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| 173 | if plottable.name == self.panel.graph.selected_plottable: |
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| 174 | ## put the errors values back to the model if the errors |
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| 175 | ## were hiden before sending them to the fit engine |
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| 176 | if len(self.err_dy) > 0: |
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| 177 | dy = plottable.dy |
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| 178 | if plottable.name in self.err_dy.iterkeys(): |
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| 179 | dy = self.err_dy[plottable.name] |
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| 180 | data = self.copy_data(plottable, dy) |
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| 181 | else: |
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| 182 | data = plottable |
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| 183 | self.compute_helper(data=data) |
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| 184 | |
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| 185 | def set_data(self, data_list): |
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| 186 | """ |
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| 187 | receive a list of data and compute invariant |
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| 188 | """ |
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| 189 | if len(data_list) > 1: |
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| 190 | msg = "invariant panel does not allow multiple data!\n" |
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| 191 | msg += "Please select one.\n" |
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| 192 | from invariant_widgets import DataDialog |
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| 193 | dlg = DataDialog(data_list=data_list, text=msg) |
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| 194 | if dlg.ShowModal() == wx.ID_OK: |
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| 195 | data = dlg.get_data() |
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| 196 | if issubclass(data.__class__, LoaderData1D): |
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| 197 | wx.PostEvent(self.parent, NewPlotEvent(plot=data_list[0], |
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| 198 | title=data_list[0].title)) |
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| 199 | self.compute_helper(data_list[0]) |
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| 200 | else: |
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| 201 | msg = "invariant cannot be computed for data of " |
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| 202 | msg += "type %s" % (data_list[0].__class__.__name__) |
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| 203 | wx.PostEvent(self.parent, |
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| 204 | StatusEvent(status=msg, info='error')) |
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| 205 | elif len(data_list) == 1: |
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| 206 | if issubclass(data_list[0].__class__, LoaderData1D): |
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| 207 | wx.PostEvent(self.parent, NewPlotEvent(plot=data_list[0], |
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| 208 | title=data_list[0].title)) |
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| 209 | self.compute_helper(data_list[0]) |
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| 210 | else: |
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| 211 | msg = "invariant cannot be computed for" |
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| 212 | msg += " data of type %s" % (data_list[0].__class__.__name__) |
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| 213 | wx.PostEvent(self.parent, |
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| 214 | StatusEvent(status=msg, info='error')) |
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| 215 | |
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| 216 | |
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| 217 | def clear_panel(self): |
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| 218 | self.invariant_panel.clear_panel() |
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| 219 | |
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| 220 | def compute_helper(self, data): |
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| 221 | """ |
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| 222 | """ |
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| 223 | if data is None: |
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| 224 | return |
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| 225 | # set current data if not it's a state data |
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| 226 | if not self.invariant_panel.is_state_data: |
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| 227 | # Store reference to data |
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| 228 | self.__data = data |
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| 229 | # Set the data set to be user for invariant calculation |
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| 230 | self.invariant_panel.set_data(data=data) |
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| 231 | |
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| 232 | def save_file(self, filepath, state=None): |
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| 233 | """ |
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| 234 | Save data in provided state object. |
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| 235 | |
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| 236 | :param filepath: path of file to write to |
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| 237 | :param state: invariant state |
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| 238 | """ |
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| 239 | # Write the state to file |
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| 240 | # First, check that the data is of the right type |
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| 241 | current_plottable = self.__data |
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| 242 | |
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| 243 | if issubclass(current_plottable.__class__, LoaderData1D): |
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| 244 | self.state_reader.write(filepath, current_plottable, state) |
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| 245 | else: |
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| 246 | msg = "invariant.save_file: the data being saved is" |
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| 247 | msg += " not a DataLoader.data_info.Data1D object" |
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| 248 | raise RuntimeError, msg |
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| 249 | |
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| 250 | def set_state(self, state=None, datainfo=None): |
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| 251 | """ |
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| 252 | Call-back method for the state reader. |
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| 253 | This method is called when a .inv/.svs file is loaded. |
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| 254 | |
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| 255 | :param state: State object |
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| 256 | """ |
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| 257 | self.temp_state = None |
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| 258 | try: |
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| 259 | if datainfo.__class__.__name__ == 'list': |
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| 260 | data = datainfo[0] |
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| 261 | else: |
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| 262 | data = datainfo |
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| 263 | if data is None: |
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| 264 | msg = "invariant.set_state: datainfo parameter cannot" |
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| 265 | msg += " be None in standalone mode" |
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| 266 | raise RuntimeError, msg |
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| 267 | |
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| 268 | name = data.meta_data['invstate'].file |
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| 269 | data.meta_data['invstate'].file = name |
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| 270 | data.name = name |
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| 271 | data.filename = name |
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| 272 | data = self.parent.create_gui_data(data,None) |
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| 273 | #self.__data = datainfo |
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| 274 | #self.__data.group_id = data.filename |
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| 275 | #self.__data.id = datainfo.filename |
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| 276 | self.__data = data |
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| 277 | wx.PostEvent(self.parent, NewPlotEvent(plot=self.__data, |
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| 278 | reset=True, title=self.__data.title)) |
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| 279 | #temp_state = copy.deepcopy(state) |
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| 280 | #temp_state = self.state_reader.get_state() |
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| 281 | # set state |
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| 282 | self.invariant_panel.is_state_data = True |
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| 283 | |
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| 284 | # Make sure the user sees the invariant panel after loading |
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| 285 | #self.parent.set_perspective(self.perspective) |
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| 286 | self.on_perspective(event=None) |
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| 287 | # Load the invariant states |
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| 288 | self.temp_state = state |
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| 289 | self.invariant_panel.set_state(state=state,data=self.__data) |
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| 290 | |
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| 291 | except: |
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| 292 | logging.error("invariant.set_state: %s" % sys.exc_value) |
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| 293 | |
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| 294 | def on_set_state_helper(self, event=None): |
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| 295 | """ |
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| 296 | Set the state when called by EVT_STATE_UPDATE event from guiframe |
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| 297 | after a .inv/.svs file is loaded |
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| 298 | """ |
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| 299 | self.invariant_panel.set_state(state=self.temp_state, |
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| 300 | data=self.__data) |
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| 301 | self.temp_state = None |
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| 302 | |
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| 303 | |
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| 304 | def plot_theory(self, data=None, name=None): |
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| 305 | """ |
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| 306 | Receive a data set and post a NewPlotEvent to parent. |
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| 307 | |
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| 308 | :param data: extrapolated data to be plotted |
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| 309 | :param name: Data's name to use for the legend |
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| 310 | """ |
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| 311 | #import copy |
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| 312 | if data is None: |
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| 313 | new_plot = Theory1D(x=[], y=[], dy=None) |
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| 314 | else: |
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| 315 | scale = self.invariant_panel.get_scale() |
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| 316 | background = self.invariant_panel.get_background() |
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| 317 | |
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| 318 | if scale != 0: |
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| 319 | # Put back the sacle and bkg for plotting |
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| 320 | data.y = (data.y + background)/scale |
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| 321 | new_plot = Theory1D(x=data.x, y=data.y, dy=None) |
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| 322 | else: |
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| 323 | msg = "Scale can not be zero." |
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| 324 | raise ValueError, msg |
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| 325 | |
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| 326 | new_plot.name = name |
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| 327 | new_plot.xaxis(self.__data._xaxis, self.__data._xunit) |
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| 328 | new_plot.yaxis(self.__data._yaxis, self.__data._yunit) |
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| 329 | new_plot.group_id = self.__data.group_id |
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| 330 | new_plot.id = self.__data.id + name |
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| 331 | new_plot.title = self.__data.title |
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| 332 | # Save theory_data in a state |
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| 333 | if data != None: |
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| 334 | name_head = name.split('-') |
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| 335 | if name_head[0] == 'Low': |
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| 336 | self.invariant_panel.state.theory_lowQ = copy.deepcopy(new_plot) |
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| 337 | elif name_head[0] == 'High': |
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| 338 | self.invariant_panel.state.theory_highQ =copy.deepcopy(new_plot) |
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| 339 | |
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| 340 | wx.PostEvent(self.parent, NewPlotEvent(plot=new_plot, |
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| 341 | title=self.__data.title)) |
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| 342 | |
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| 343 | def plot_data(self, scale, background): |
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| 344 | """ |
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| 345 | replot the current data if the user enters a new scale or background |
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| 346 | """ |
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| 347 | new_plot = scale * self.__data - background |
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| 348 | new_plot.name = self.__data.name |
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| 349 | new_plot.group_id = self.__data.group_id |
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| 350 | new_plot.id = self.__data.id |
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| 351 | new_plot.title = self.__data.title |
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| 352 | |
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| 353 | # Save data in a state: but seems to never happen |
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| 354 | if new_plot != None: |
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| 355 | self.invariant_panel.state.data = copy.deepcopy(new_plot) |
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| 356 | wx.PostEvent(self.parent, NewPlotEvent(plot=new_plot, |
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| 357 | title=new_plot.title)) |
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| 358 | |
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