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| 3 | |
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| 4 | ################################################################################ |
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| 5 | #This software was developed by the University of Tennessee as part of the |
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| 6 | #Distributed Data Analysis of Neutron Scattering Experiments (DANSE) |
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| 7 | #project funded by the US National Science Foundation. |
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| 8 | # |
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| 9 | #See the license text in license.txt |
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| 10 | # |
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| 11 | #copyright 2009, University of Tennessee |
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| 12 | ################################################################################ |
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| 13 | |
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| 14 | |
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| 15 | import sys |
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| 16 | import wx |
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| 17 | import copy |
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| 18 | import logging |
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| 19 | |
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| 20 | |
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| 21 | from sans.guiframe.dataFitting import Data1D |
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| 22 | from sans.guiframe.events import NewPlotEvent |
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| 23 | from sans.guiframe.gui_style import GUIFRAME_ID |
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| 24 | from .invariant_state import Reader as reader |
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| 25 | from DataLoader.loader import Loader |
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| 26 | from .invariant_panel import InvariantPanel |
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| 27 | from sans.guiframe.plugin_base import PluginBase |
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| 28 | |
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| 29 | class Plugin(PluginBase): |
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| 30 | """ |
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| 31 | This class defines the interface for invariant Plugin class |
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| 32 | that can be used by the gui_manager. |
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| 33 | """ |
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| 34 | |
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| 35 | def __init__(self, standalone=False): |
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| 36 | PluginBase.__init__(self, name="Invariant", standalone=standalone) |
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| 37 | |
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| 38 | #dictionary containing data name and error on dy of that data |
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| 39 | self.err_dy = {} |
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| 40 | |
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| 41 | #default state objects |
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| 42 | self.state_reader = None |
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| 43 | self._extensions = '.inv' |
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| 44 | self.temp_state = None |
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| 45 | self.__data = None |
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| 46 | |
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| 47 | # Log startup |
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| 48 | logging.info("Invariant plug-in started") |
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| 49 | |
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| 50 | def help(self, evt): |
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| 51 | """ |
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| 52 | Show a general help dialog. |
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| 53 | """ |
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| 54 | from .help_panel import HelpWindow |
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| 55 | frame = HelpWindow(None, -1) |
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| 56 | frame.Show(True) |
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| 57 | |
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| 58 | def get_data(self): |
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| 59 | """ |
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| 60 | """ |
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| 61 | return self.__data |
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| 62 | |
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| 63 | def get_panels(self, parent): |
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| 64 | """ |
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| 65 | Create and return the list of wx.Panels for your plug-in. |
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| 66 | Define the plug-in perspective. |
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| 67 | |
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| 68 | Panels should inherit from DefaultPanel defined below, |
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| 69 | or should present the same interface. They must define |
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| 70 | "window_caption" and "window_name". |
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| 71 | |
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| 72 | :param parent: parent window |
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| 73 | |
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| 74 | :return: list of panels |
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| 75 | """ |
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| 76 | ## Save a reference to the parent |
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| 77 | self.parent = parent |
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| 78 | self.invariant_panel = InvariantPanel(parent=self.parent) |
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| 79 | self.invariant_panel.set_manager(manager=self) |
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| 80 | self.perspective.append(self.invariant_panel.window_name) |
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| 81 | #Create reader when fitting panel are created |
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| 82 | self.state_reader = reader(self.set_state) |
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| 83 | #append that reader to list of available reader |
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| 84 | loader = Loader() |
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| 85 | loader.associate_file_reader(".inv", self.state_reader) |
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| 86 | loader.associate_file_reader(".svs", self.state_reader) |
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| 87 | # Return the list of panels |
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| 88 | return [self.invariant_panel] |
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| 89 | |
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| 90 | def get_context_menu(self, plotpanel=None): |
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| 91 | """ |
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| 92 | This method is optional. |
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| 93 | |
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| 94 | When the context menu of a plot is rendered, the |
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| 95 | get_context_menu method will be called to give you a |
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| 96 | chance to add a menu item to the context menu. |
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| 97 | |
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| 98 | A ref to a Graph object is passed so that you can |
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| 99 | investigate the plot content and decide whether you |
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| 100 | need to add items to the context menu. |
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| 101 | |
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| 102 | This method returns a list of menu items. |
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| 103 | Each item is itself a list defining the text to |
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| 104 | appear in the menu, a tool-tip help text, and a |
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| 105 | call-back method. |
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| 106 | |
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| 107 | :param graph: the Graph object to which we attach the context menu |
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| 108 | |
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| 109 | :return: a list of menu items with call-back function |
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| 110 | """ |
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| 111 | graph = plotpanel.graph |
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| 112 | invariant_option = "Compute invariant" |
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| 113 | invariant_hint = "Will displays the invariant panel for" |
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| 114 | invariant_hint += " futher computation" |
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| 115 | |
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| 116 | if graph.selected_plottable not in plotpanel.plots: |
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| 117 | return [] |
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| 118 | data = plotpanel.plots[graph.selected_plottable] |
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| 119 | |
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| 120 | if not issubclass(data.__class__, Data1D): |
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| 121 | name = data.__class__.__name__ |
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| 122 | msg = "Invariant use only Data1D got: [%s] " % str(name) |
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| 123 | raise ValueError, msg |
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| 124 | |
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| 125 | if data.name != "$I_{obs}(q)$" and data.name != " $P_{fit}(r)$": |
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| 126 | return [[invariant_option, invariant_hint, |
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| 127 | self._compute_invariant]] |
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| 128 | return [] |
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| 129 | |
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| 130 | def _compute_invariant(self, event): |
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| 131 | """ |
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| 132 | Open the invariant panel to invariant computation |
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| 133 | """ |
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| 134 | self.panel = event.GetEventObject() |
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| 135 | Plugin.on_perspective(self, event=event) |
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| 136 | id = self.panel.graph.selected_plottable |
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| 137 | data = self.panel.plots[self.panel.graph.selected_plottable] |
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| 138 | if data is None: |
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| 139 | return |
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| 140 | if not issubclass(data.__class__, Data1D): |
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| 141 | name = data.__class__.__name__ |
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| 142 | msg = "Invariant use only Data1D got: [%s] " % str(name) |
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| 143 | raise ValueError, msg |
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| 144 | self.compute_helper(data=data) |
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| 145 | |
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| 146 | def set_data(self, data_list=None): |
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| 147 | """ |
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| 148 | receive a list of data and compute invariant |
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| 149 | """ |
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| 150 | data = None |
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| 151 | if data_list is None: |
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| 152 | data_list = [] |
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| 153 | if len(data_list) >= 1: |
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| 154 | if len(data_list) == 1: |
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| 155 | data = data_list[0] |
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| 156 | else: |
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| 157 | msg = "invariant panel does not allow multiple data!\n" |
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| 158 | msg += "Please select one.\n" |
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| 159 | from invariant_widgets import DataDialog |
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| 160 | dlg = DataDialog(data_list=data_list, text=msg) |
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| 161 | if dlg.ShowModal() == wx.ID_OK: |
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| 162 | data = dlg.get_data() |
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| 163 | if data is None: |
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| 164 | return |
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| 165 | if issubclass(data.__class__, Data1D): |
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| 166 | wx.PostEvent(self.parent, NewPlotEvent(plot=data, |
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| 167 | title=data.title)) |
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| 168 | try: |
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| 169 | self.compute_helper(data) |
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| 170 | except: |
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| 171 | msg = "Prview Set_data: " + str(sys.exc_value) |
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| 172 | wx.PostEvent(self.parent, StatusEvent(status=msg, |
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| 173 | info="error")) |
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| 174 | else: |
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| 175 | msg = "invariant cannot be computed for data of " |
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| 176 | msg += "type %s" % (data.__class__.__name__) |
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| 177 | wx.PostEvent(self.parent, |
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| 178 | StatusEvent(status=msg, info='error')) |
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| 179 | def delete_data(self, data_id): |
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| 180 | """ |
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| 181 | """ |
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| 182 | for id in data_id: |
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| 183 | if id == self.__data.id: |
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| 184 | self.clear_panel() |
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| 185 | |
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| 186 | def clear_panel(self): |
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| 187 | """ |
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| 188 | """ |
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| 189 | self.invariant_panel.clear_panel() |
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| 190 | |
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| 191 | def compute_helper(self, data): |
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| 192 | """ |
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| 193 | """ |
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| 194 | if data is None: |
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| 195 | return |
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| 196 | # set current data if not it's a state data |
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| 197 | if not self.invariant_panel.is_state_data: |
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| 198 | # Store reference to data |
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| 199 | self.__data = data |
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| 200 | # Set the data set to be user for invariant calculation |
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| 201 | self.invariant_panel.set_data(data=data) |
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| 202 | |
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| 203 | def save_file(self, filepath, state=None): |
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| 204 | """ |
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| 205 | Save data in provided state object. |
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| 206 | |
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| 207 | :param filepath: path of file to write to |
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| 208 | :param state: invariant state |
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| 209 | """ |
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| 210 | # Write the state to file |
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| 211 | # First, check that the data is of the right type |
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| 212 | current_plottable = self.__data |
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| 213 | |
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| 214 | if issubclass(current_plottable.__class__, LoaderData1D): |
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| 215 | self.state_reader.write(filepath, current_plottable, state) |
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| 216 | else: |
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| 217 | msg = "invariant.save_file: the data being saved is" |
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| 218 | msg += " not a DataLoader.data_info.Data1D object" |
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| 219 | raise RuntimeError, msg |
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| 220 | |
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| 221 | def set_state(self, state=None, datainfo=None): |
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| 222 | """ |
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| 223 | Call-back method for the state reader. |
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| 224 | This method is called when a .inv/.svs file is loaded. |
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| 225 | |
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| 226 | :param state: State object |
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| 227 | """ |
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| 228 | self.temp_state = None |
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| 229 | try: |
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| 230 | if datainfo.__class__.__name__ == 'list': |
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| 231 | data = datainfo[0] |
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| 232 | else: |
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| 233 | data = datainfo |
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| 234 | if data is None: |
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| 235 | msg = "invariant.set_state: datainfo parameter cannot" |
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| 236 | msg += " be None in standalone mode" |
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| 237 | raise RuntimeError, msg |
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| 238 | |
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| 239 | name = data.meta_data['invstate'].file |
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| 240 | data.meta_data['invstate'].file = name |
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| 241 | data.name = name |
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| 242 | data.filename = name |
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| 243 | data = self.parent.create_gui_data(data,None) |
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| 244 | self.__data = data |
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| 245 | wx.PostEvent(self.parent, NewPlotEvent(plot=self.__data, |
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| 246 | reset=True, title=self.__data.title)) |
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| 247 | #temp_state = copy.deepcopy(state) |
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| 248 | #temp_state = self.state_reader.get_state() |
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| 249 | # set state |
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| 250 | self.invariant_panel.is_state_data = True |
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| 251 | |
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| 252 | # Make sure the user sees the invariant panel after loading |
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| 253 | #self.parent.set_perspective(self.perspective) |
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| 254 | self.on_perspective(event=None) |
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| 255 | # Load the invariant states |
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| 256 | self.temp_state = state |
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| 257 | self.invariant_panel.set_state(state=state,data=self.__data) |
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| 258 | |
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| 259 | except: |
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| 260 | logging.error("invariant.set_state: %s" % sys.exc_value) |
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| 261 | |
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| 262 | def on_set_state_helper(self, event=None): |
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| 263 | """ |
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| 264 | Set the state when called by EVT_STATE_UPDATE event from guiframe |
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| 265 | after a .inv/.svs file is loaded |
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| 266 | """ |
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| 267 | self.invariant_panel.set_state(state=self.temp_state, |
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| 268 | data=self.__data) |
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| 269 | self.temp_state = None |
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| 270 | |
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| 271 | |
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| 272 | def plot_theory(self, data=None, name=None): |
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| 273 | """ |
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| 274 | Receive a data set and post a NewPlotEvent to parent. |
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| 275 | |
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| 276 | :param data: extrapolated data to be plotted |
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| 277 | :param name: Data's name to use for the legend |
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| 278 | """ |
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| 279 | #import copy |
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| 280 | if data is None: |
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| 281 | id = str(self.__data.id) + name |
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| 282 | group_id = self.__data.group_id |
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| 283 | wx.PostEvent(self.parent, NewPlotEvent(id=id, |
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| 284 | group_id=group_id, |
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| 285 | action='Remove')) |
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| 286 | return |
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| 287 | |
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| 288 | new_plot = Data1D(x=[], y=[], dy=None) |
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| 289 | new_plot.symbol = GUIFRAME_ID.CURVE_SYMBOL_NUM |
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| 290 | scale = self.invariant_panel.get_scale() |
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| 291 | background = self.invariant_panel.get_background() |
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| 292 | |
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| 293 | if scale != 0: |
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| 294 | # Put back the sacle and bkg for plotting |
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| 295 | data.y = (data.y + background)/scale |
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| 296 | new_plot = Data1D(x=data.x, y=data.y, dy=None) |
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| 297 | new_plot.symbol = GUIFRAME_ID.CURVE_SYMBOL_NUM |
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| 298 | else: |
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| 299 | msg = "Scale can not be zero." |
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| 300 | raise ValueError, msg |
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| 301 | if len(new_plot.x)== 0 : |
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| 302 | return |
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| 303 | |
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| 304 | new_plot.name = name |
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| 305 | new_plot.xaxis(self.__data._xaxis, self.__data._xunit) |
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| 306 | new_plot.yaxis(self.__data._yaxis, self.__data._yunit) |
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| 307 | new_plot.group_id = self.__data.group_id |
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| 308 | new_plot.id = str(self.__data.id) + name |
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| 309 | new_plot.title = self.__data.title |
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| 310 | # Save theory_data in a state |
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| 311 | if data != None: |
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| 312 | name_head = name.split('-') |
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| 313 | if name_head[0] == 'Low': |
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| 314 | self.invariant_panel.state.theory_lowQ = copy.deepcopy(new_plot) |
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| 315 | elif name_head[0] == 'High': |
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| 316 | self.invariant_panel.state.theory_highQ =copy.deepcopy(new_plot) |
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| 317 | |
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| 318 | self.parent.update_theory(data_id=self.__data.id, theory=new_plot) |
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| 319 | wx.PostEvent(self.parent, NewPlotEvent(plot=new_plot, |
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| 320 | title=self.__data.title)) |
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| 321 | |
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| 322 | def plot_data(self, scale, background): |
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| 323 | """ |
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| 324 | replot the current data if the user enters a new scale or background |
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| 325 | """ |
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| 326 | new_plot = scale * self.__data - background |
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| 327 | new_plot.name = self.__data.name |
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| 328 | new_plot.group_id = self.__data.group_id |
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| 329 | new_plot.id = self.__data.id |
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| 330 | new_plot.title = self.__data.title |
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| 331 | |
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| 332 | # Save data in a state: but seems to never happen |
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| 333 | if new_plot != None: |
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| 334 | self.invariant_panel.state.data = copy.deepcopy(new_plot) |
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| 335 | wx.PostEvent(self.parent, NewPlotEvent(plot=new_plot, |
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| 336 | title=new_plot.title)) |
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| 337 | |
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