[6d920cd] | 1 | import os, sys,numpy |
---|
[de9483d] | 2 | import wx |
---|
[81812d9] | 3 | from dataFitting import Data1D, Theory1D |
---|
| 4 | from danse.common.plottools.plottables import Data2D |
---|
[c7bc3e7] | 5 | from DataLoader.loader import Loader |
---|
[58eac5d] | 6 | |
---|
[de9483d] | 7 | def choose_data_file(parent, location=None): |
---|
| 8 | path = None |
---|
| 9 | if location==None: |
---|
| 10 | location = os.getcwd() |
---|
[c7bc3e7] | 11 | |
---|
| 12 | l = Loader() |
---|
| 13 | cards = l.get_wildcards() |
---|
| 14 | wlist = '|'.join(cards) |
---|
| 15 | |
---|
| 16 | dlg = wx.FileDialog(parent, "Choose a file", location, "", wlist, wx.OPEN) |
---|
[de9483d] | 17 | if dlg.ShowModal() == wx.ID_OK: |
---|
| 18 | path = dlg.GetPath() |
---|
| 19 | mypath = os.path.basename(path) |
---|
| 20 | dlg.Destroy() |
---|
| 21 | |
---|
| 22 | return path |
---|
| 23 | |
---|
| 24 | |
---|
| 25 | def load_ascii_1D(path): |
---|
| 26 | """ |
---|
| 27 | Load a 1D ascii file, with errors |
---|
| 28 | """ |
---|
| 29 | if path and os.path.isfile(path): |
---|
| 30 | |
---|
[fc2b91a] | 31 | file_x = numpy.zeros(0) |
---|
| 32 | file_y = numpy.zeros(0) |
---|
| 33 | file_dy = numpy.zeros(0) |
---|
[bc3dd65d] | 34 | file_dx = numpy.zeros(0) |
---|
[de9483d] | 35 | |
---|
| 36 | input_f = open(path,'r') |
---|
| 37 | buff = input_f.read() |
---|
| 38 | lines = buff.split('\n') |
---|
[fc2b91a] | 39 | |
---|
| 40 | has_dy = False |
---|
[bc3dd65d] | 41 | has_dx = False |
---|
[fc2b91a] | 42 | |
---|
[de9483d] | 43 | for line in lines: |
---|
| 44 | try: |
---|
| 45 | toks = line.split() |
---|
| 46 | x = float(toks[0]) |
---|
| 47 | y = float(toks[1]) |
---|
| 48 | if len(toks)==3: |
---|
[fc2b91a] | 49 | has_dy = True |
---|
[bc3dd65d] | 50 | errdy = float(toks[2]) |
---|
[de9483d] | 51 | else: |
---|
[bc3dd65d] | 52 | errdy = 0.0 |
---|
| 53 | if len(toks)==4: |
---|
| 54 | has_dx = True |
---|
| 55 | errdx = float(toks[3]) |
---|
| 56 | else: |
---|
| 57 | errdx = 0.0 |
---|
[fc2b91a] | 58 | file_x = numpy.append(file_x, x) |
---|
| 59 | file_y = numpy.append(file_y, y) |
---|
[bc3dd65d] | 60 | file_dy = numpy.append(file_dy, dyerr) |
---|
| 61 | file_dx = numpy.append(file_dx, dxerr) |
---|
[de9483d] | 62 | except: |
---|
| 63 | print "READ ERROR", line |
---|
| 64 | |
---|
[fc2b91a] | 65 | if has_dy==False: |
---|
| 66 | file_dy = None |
---|
[bc3dd65d] | 67 | if has_dx==False: |
---|
| 68 | file_dx = None |
---|
[fc2b91a] | 69 | |
---|
[bc3dd65d] | 70 | return file_x, file_y, file_dy, file_dx |
---|
[e5bfd57] | 71 | return None, None, None, None |
---|
[fc2b91a] | 72 | |
---|
[6d920cd] | 73 | def plot_data(parent, path): |
---|
| 74 | """ |
---|
| 75 | Use the DataLoader loader to created data to plot. |
---|
| 76 | @param path: the path of the data to load |
---|
| 77 | """ |
---|
[ccb560a] | 78 | from sans.guicomm.events import NewPlotEvent, StatusEvent |
---|
[4102709] | 79 | from DataLoader.loader import Loader |
---|
[f2776f6] | 80 | |
---|
[4102709] | 81 | #Instantiate a loader |
---|
[81812d9] | 82 | L = Loader() |
---|
[4102709] | 83 | |
---|
| 84 | #Recieves data |
---|
[ccb560a] | 85 | try: |
---|
| 86 | output=L.load(path) |
---|
[81812d9] | 87 | |
---|
[ccb560a] | 88 | except: |
---|
| 89 | wx.PostEvent(parent, StatusEvent(status="Problem loading file: %s" % sys.exc_value)) |
---|
| 90 | return |
---|
[7c427a6] | 91 | if output==None: |
---|
| 92 | msg="Could not open this page" |
---|
| 93 | wx.PostEvent(parent, StatusEvent(status=msg)) |
---|
| 94 | return |
---|
[acb1ad1] | 95 | filename = os.path.basename(path) |
---|
[cd84dca] | 96 | |
---|
[81812d9] | 97 | if not output.__class__.__name__=="list": |
---|
[12aa9b5] | 98 | ## smearing info |
---|
[81812d9] | 99 | try: |
---|
[12aa9b5] | 100 | dxl = output.dxl |
---|
| 101 | dxw = output.dxw |
---|
[81812d9] | 102 | except: |
---|
[12aa9b5] | 103 | dxl = None |
---|
| 104 | dxw = None |
---|
| 105 | ## data 's name |
---|
| 106 | if output.filename==None: |
---|
| 107 | output.filename=str(filename) |
---|
[ecd74a1] | 108 | |
---|
[12aa9b5] | 109 | ## Creating a Data2D with output |
---|
[81812d9] | 110 | if hasattr(output,'data'): |
---|
[b86c920] | 111 | |
---|
| 112 | new_plot = Data2D(image=output.data,err_image=output.err_data, |
---|
[81812d9] | 113 | xmin=output.xmin,xmax=output.xmax, |
---|
| 114 | ymin=output.ymin,ymax=output.ymax) |
---|
| 115 | new_plot.x_bins=output.x_bins |
---|
| 116 | new_plot.y_bins=output.y_bins |
---|
[ecd74a1] | 117 | |
---|
[12aa9b5] | 118 | ##Creating Data1D with output |
---|
[81812d9] | 119 | else: |
---|
[12aa9b5] | 120 | ##dy values checked |
---|
[7c427a6] | 121 | dy= output.dy |
---|
| 122 | if dy ==None: |
---|
| 123 | dy= numpy.zeros(len(output.y)) |
---|
| 124 | |
---|
| 125 | msg="Loading 1D data: " |
---|
| 126 | wx.PostEvent(parent, StatusEvent(status= "%s %s"%(msg, output.filename))) |
---|
| 127 | new_plot = Data1D(x=output.x, y=output.y, dx=output.dx, |
---|
| 128 | dy= dy, dxl=dxl, dxw=dxw) |
---|
[12aa9b5] | 129 | |
---|
| 130 | ## source will request in dataLoader .manipulation module |
---|
[81812d9] | 131 | new_plot.source=output.source |
---|
[12aa9b5] | 132 | ## name of the data allow to differentiate data when plotted |
---|
[35eeea8] | 133 | name= output.filename |
---|
[f2776f6] | 134 | |
---|
[35eeea8] | 135 | new_plot.name = name |
---|
[12aa9b5] | 136 | ## allow to highlight data when plotted |
---|
[81812d9] | 137 | new_plot.interactive = True |
---|
[12aa9b5] | 138 | ## when 2 data have the same id override the 1 st plotted |
---|
[35eeea8] | 139 | new_plot.id = name |
---|
[12aa9b5] | 140 | ## info is a reference to output of dataloader that can be used |
---|
| 141 | ## to save data 1D as cansas xml file |
---|
[81812d9] | 142 | new_plot.info= output |
---|
[12aa9b5] | 143 | ## detector used by dataLoader.manipulation module |
---|
[81812d9] | 144 | new_plot.detector =output.detector |
---|
[12aa9b5] | 145 | ## If the data file does not tell us what the axes are, just assume... |
---|
[81812d9] | 146 | new_plot.xaxis(output._xaxis,output._xunit) |
---|
| 147 | new_plot.yaxis(output._yaxis,output._yunit) |
---|
[12aa9b5] | 148 | ##group_id specify on which panel to plot this data |
---|
[35eeea8] | 149 | new_plot.group_id = name |
---|
[5ee2306] | 150 | new_plot.is_data =True |
---|
[12aa9b5] | 151 | ##post data to plot |
---|
[35eeea8] | 152 | wx.PostEvent(parent, NewPlotEvent(plot=new_plot, title=str(name))) |
---|
[8bd764d] | 153 | |
---|
[12aa9b5] | 154 | ## the output of the loader is a list , some xml files contain more than one data |
---|
[81812d9] | 155 | else: |
---|
[768656e] | 156 | i=1 |
---|
[81812d9] | 157 | for item in output: |
---|
| 158 | try: |
---|
[bc3dd65d] | 159 | dx=item.dx |
---|
[81812d9] | 160 | dxl=item.dxl |
---|
| 161 | dxw=item.dxw |
---|
| 162 | except: |
---|
[bc3dd65d] | 163 | dx=None |
---|
[81812d9] | 164 | dxl=None |
---|
| 165 | dxw=None |
---|
[7c427a6] | 166 | dy = item.dy |
---|
| 167 | if dy ==None: |
---|
| 168 | dy= numpy.zeros(len(item.y)) |
---|
| 169 | |
---|
| 170 | new_plot = Data1D(x=item.x,y=item.y,dx=dx,dy=item.dy,dxl=dxl,dxw=dxw) |
---|
[81812d9] | 171 | new_plot.source=item.source |
---|
[35eeea8] | 172 | |
---|
| 173 | name= str(item.run[0]) |
---|
| 174 | |
---|
| 175 | new_plot.name = name |
---|
[81812d9] | 176 | new_plot.interactive = True |
---|
| 177 | new_plot.detector =item.detector |
---|
| 178 | # If the data file does not tell us what the axes are, just assume... |
---|
| 179 | new_plot.xaxis(item._xaxis,item._xunit) |
---|
| 180 | new_plot.yaxis(item._yaxis,item._yunit) |
---|
[35eeea8] | 181 | new_plot.group_id = name |
---|
| 182 | new_plot.id = name |
---|
[6d920cd] | 183 | new_plot.info= item |
---|
[5ee2306] | 184 | new_plot.is_data =True |
---|
[18eba35] | 185 | if hasattr(item,"title"): |
---|
| 186 | title= item.title |
---|
| 187 | else: |
---|
[35eeea8] | 188 | title= name |
---|
[18eba35] | 189 | wx.PostEvent(parent, NewPlotEvent(plot=new_plot, title=str(title))) |
---|
[768656e] | 190 | i+=1 |
---|
[81812d9] | 191 | |
---|
| 192 | |
---|