[b3644f3] | 1 | |
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[6d920cd] | 2 | import os, sys,numpy |
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[de9483d] | 3 | import wx |
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[a618972] | 4 | import re |
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[b3644f3] | 5 | |
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[ff3f900b] | 6 | from dataFitting import Data1D |
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| 7 | from dataFitting import Data2D |
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[c7bc3e7] | 8 | from DataLoader.loader import Loader |
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[b3644f3] | 9 | from load_thread import DataReader |
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[7a07864] | 10 | from sans.guicomm.events import FitStateUpdateEvent |
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| 11 | from sans.guicomm.events import InvStateUpdateEvent |
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[b3644f3] | 12 | |
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[4e9583c] | 13 | from sans.guicomm.events import NewPlotEvent, StatusEvent |
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[9b18735] | 14 | SVS_FILE_EXT = ['.svs','.inv','.prv','.fitv'] |
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[b3644f3] | 15 | |
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[d792e813] | 16 | def enable_add_data(existing_panel, new_plot): |
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| 17 | """ |
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[d955bf19] | 18 | Enable append data on a plot panel |
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[d792e813] | 19 | """ |
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| 20 | is_theory = len(existing_panel.plots)<= 1 and \ |
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| 21 | existing_panel.plots.values()[0].__class__.__name__=="Theory1D" |
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| 22 | |
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| 23 | is_data2d = hasattr(new_plot, 'data') |
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| 24 | is_data1d = existing_panel.__class__.__name__ == "ModelPanel1D"\ |
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| 25 | and existing_panel.group_id is not None |
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[d45e7e9] | 26 | has_meta_data = hasattr(new_plot, 'meta_data') |
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| 27 | |
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| 28 | #disable_add_data if the data is being recovered from a saved state file. |
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| 29 | is_state_data = False |
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| 30 | if has_meta_data: |
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| 31 | if 'invstate' in new_plot.meta_data: is_state_data = True |
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| 32 | if 'prstate' in new_plot.meta_data: is_state_data = True |
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| 33 | if 'fitstate' in new_plot.meta_data: is_state_data = True |
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| 34 | |
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| 35 | return is_data1d and not is_data2d and not is_theory and not is_state_data |
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[58eac5d] | 36 | |
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[a618972] | 37 | def parse_name(name, expression): |
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| 38 | """ |
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[d955bf19] | 39 | remove "_" in front of a name |
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[a618972] | 40 | """ |
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| 41 | if re.match(expression, name) is not None: |
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| 42 | word = re.split(expression, name, 1) |
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| 43 | for item in word: |
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| 44 | if item.lstrip().rstrip() != '': |
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| 45 | return item |
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| 46 | else: |
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| 47 | return name |
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| 48 | |
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[de9483d] | 49 | def choose_data_file(parent, location=None): |
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[d955bf19] | 50 | """ |
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| 51 | """ |
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[de9483d] | 52 | path = None |
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[196608d] | 53 | if location == None: |
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[de9483d] | 54 | location = os.getcwd() |
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[c7bc3e7] | 55 | |
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| 56 | l = Loader() |
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| 57 | cards = l.get_wildcards() |
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| 58 | wlist = '|'.join(cards) |
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| 59 | |
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[4e9583c] | 60 | dlg = wx.FileDialog(parent, "Choose a file", location, "", wlist, wx.OPEN) |
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[de9483d] | 61 | if dlg.ShowModal() == wx.ID_OK: |
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| 62 | path = dlg.GetPath() |
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| 63 | mypath = os.path.basename(path) |
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| 64 | dlg.Destroy() |
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| 65 | |
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[4e9583c] | 66 | return path |
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[de9483d] | 67 | |
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[d792e813] | 68 | def open_dialog_append_data(panel_name, data_name): |
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[b91c736] | 69 | """ |
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[d955bf19] | 70 | Pop up an error message. |
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| 71 | |
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| 72 | :param panel_name: the name of the current panel |
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| 73 | :param data_name: the name of the current data |
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| 74 | |
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[b91c736] | 75 | """ |
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| 76 | message = " Do you want to append %s data\n in "%(str(data_name)) |
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| 77 | message += " %s panel?\n\n"%(str(panel_name)) |
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| 78 | dial = wx.MessageDialog(None, message, 'Question', |
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| 79 | wx.YES_NO|wx.NO_DEFAULT|wx.ICON_QUESTION) |
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| 80 | if dial.ShowModal() == wx.ID_YES: |
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| 81 | return True |
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| 82 | else: |
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| 83 | return False |
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[4e9583c] | 84 | |
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[de9483d] | 85 | |
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[4e9583c] | 86 | def load_ascii_1D(path): |
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| 87 | """ |
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| 88 | Load a 1D ascii file, with errors |
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| 89 | """ |
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| 90 | if path and os.path.isfile(path): |
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| 91 | |
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| 92 | file_x = numpy.zeros(0) |
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| 93 | file_y = numpy.zeros(0) |
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| 94 | file_dy = numpy.zeros(0) |
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| 95 | file_dx = numpy.zeros(0) |
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| 96 | |
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| 97 | input_f = open(path,'r') |
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| 98 | buff = input_f.read() |
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| 99 | lines = buff.split('\n') |
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| 100 | |
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| 101 | has_dy = False |
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| 102 | has_dx = False |
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| 103 | |
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| 104 | for line in lines: |
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| 105 | try: |
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| 106 | toks = line.split() |
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| 107 | x = float(toks[0]) |
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| 108 | y = float(toks[1]) |
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| 109 | if len(toks)==3: |
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| 110 | has_dy = True |
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| 111 | errdy = float(toks[2]) |
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| 112 | else: |
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| 113 | errdy = 0.0 |
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| 114 | if len(toks) == 4: |
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| 115 | has_dx = True |
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| 116 | errdx = float(toks[3]) |
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| 117 | else: |
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| 118 | errdx = 0.0 |
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| 119 | file_x = numpy.append(file_x, x) |
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| 120 | file_y = numpy.append(file_y, y) |
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| 121 | file_dy = numpy.append(file_dy, dyerr) |
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| 122 | file_dx = numpy.append(file_dx, dxerr) |
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| 123 | except: |
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| 124 | print "READ ERROR", line |
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| 125 | |
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| 126 | if has_dy == False: |
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| 127 | file_dy = None |
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| 128 | if has_dx == False: |
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| 129 | file_dx = None |
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| 130 | |
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| 131 | return file_x, file_y, file_dy, file_dx |
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| 132 | return None, None, None, None |
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[fc2b91a] | 133 | |
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[cb0d17c] | 134 | def load_error(error=None): |
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| 135 | """ |
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[d955bf19] | 136 | Pop up an error message. |
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| 137 | |
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| 138 | :param error: details error message to be displayed |
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[cb0d17c] | 139 | """ |
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[0881f51] | 140 | message = "The data file you selected could not be loaded.\n" |
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[cb0d17c] | 141 | message += "Make sure the content of your file is properly formatted.\n\n" |
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| 142 | |
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| 143 | if error is not None: |
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| 144 | message += "When contacting the DANSE team, mention the following:\n%s" % str(error) |
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| 145 | |
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| 146 | dial = wx.MessageDialog(None, message, 'Error Loading File', wx.OK | wx.ICON_EXCLAMATION) |
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| 147 | dial.ShowModal() |
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| 148 | |
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[b3644f3] | 149 | def on_load_error(parent): |
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| 150 | """ |
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| 151 | """ |
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| 152 | wx.PostEvent(parent, StatusEvent(status="Load cancel..", info="warning", |
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| 153 | type="stop")) |
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[cc1ead1] | 154 | |
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[b35d3d1] | 155 | def plot_data(parent, path, format=None): |
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[6d920cd] | 156 | """ |
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[d955bf19] | 157 | Use the DataLoader loader to created data to plot. |
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| 158 | |
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| 159 | :param path: the path of the data to load |
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[b35d3d1] | 160 | : param format: file format (as file extension) |
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[6d920cd] | 161 | """ |
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[cc1ead1] | 162 | from sans.guicomm.events import NewPlotEvent, StatusEvent |
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| 163 | from DataLoader.loader import Loader |
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[f2776f6] | 164 | |
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[cc1ead1] | 165 | # Instantiate a loader |
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| 166 | L = Loader() |
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| 167 | |
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| 168 | # Load data |
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| 169 | try: |
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[b35d3d1] | 170 | output = L.load(path, format) |
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[cc1ead1] | 171 | except: |
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[4e9583c] | 172 | load_error(sys.exc_value) |
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[cc1ead1] | 173 | return |
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[b63dc6e] | 174 | basename = os.path.basename(path) |
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[cb0d17c] | 175 | # Notify user if the loader completed the load but no data came out |
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| 176 | if output == None: |
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[028a0e8] | 177 | if not basename.endswith('.svs'): |
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| 178 | load_error("The data file appears to be empty.") |
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[cb0d17c] | 179 | return |
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[cc1ead1] | 180 | |
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[b63dc6e] | 181 | root, extension = os.path.splitext(basename) |
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| 182 | ext = extension.lower() |
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[acb1ad1] | 183 | filename = os.path.basename(path) |
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[196608d] | 184 | if not output.__class__.__name__ == "list": |
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[12aa9b5] | 185 | ## Creating a Data2D with output |
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[81812d9] | 186 | if hasattr(output,'data'): |
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[04349fe] | 187 | msg = "Loading 2D data: %s"%output.filename |
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| 188 | wx.PostEvent(parent, StatusEvent(status=msg, info="info", type="stop")) |
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[196608d] | 189 | new_plot = Data2D(image=None, err_image=None) |
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[ff3f900b] | 190 | |
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[81812d9] | 191 | else: |
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[b3644f3] | 192 | msg = "Loading 1D data: %s"%output.filename |
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| 193 | wx.PostEvent(parent, StatusEvent(status=msg, info="info", type="stop")) |
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[196608d] | 194 | new_plot = Data1D(x=[], y=[], dx=None, dy=None) |
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[ff3f900b] | 195 | |
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| 196 | new_plot.copy_from_datainfo(output) |
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| 197 | output.clone_without_data(clone=new_plot) |
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| 198 | |
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[25ccf33] | 199 | ## data 's name |
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[196608d] | 200 | if output.filename is None or output.filename == "": |
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[ff3f900b] | 201 | output.filename = str(filename) |
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[12aa9b5] | 202 | ## name of the data allow to differentiate data when plotted |
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[a618972] | 203 | name = parse_name(name=output.filename, expression="_") |
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[ff3f900b] | 204 | |
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[35eeea8] | 205 | new_plot.name = name |
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[12aa9b5] | 206 | ## allow to highlight data when plotted |
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[81812d9] | 207 | new_plot.interactive = True |
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[12aa9b5] | 208 | ## when 2 data have the same id override the 1 st plotted |
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[35eeea8] | 209 | new_plot.id = name |
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[12aa9b5] | 210 | ##group_id specify on which panel to plot this data |
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[35eeea8] | 211 | new_plot.group_id = name |
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[196608d] | 212 | new_plot.is_data = True |
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[12aa9b5] | 213 | ##post data to plot |
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[b91c736] | 214 | title = output.filename |
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[ff3f900b] | 215 | if hasattr(new_plot,"title"): |
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[b91c736] | 216 | title = str(new_plot.title.lstrip().rstrip()) |
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[196608d] | 217 | if title == "": |
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| 218 | title = str(name) |
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[ff3f900b] | 219 | else: |
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| 220 | title = str(name) |
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[b91c736] | 221 | if hasattr(parent, "panel_on_focus") and not(parent.panel_on_focus is None): |
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| 222 | existing_panel = parent.panel_on_focus |
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| 223 | panel_name = existing_panel.window_caption |
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| 224 | data_name = new_plot.name |
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[d792e813] | 225 | if enable_add_data(existing_panel, new_plot): |
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| 226 | if open_dialog_append_data(panel_name, data_name): |
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[b91c736] | 227 | #add this plot the an existing panel |
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| 228 | new_plot.group_id = existing_panel.group_id |
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[ef16f59] | 229 | # plot data |
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[af47c8d] | 230 | wx.PostEvent(parent, NewPlotEvent(plot=new_plot, title=title)) |
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[b63dc6e] | 231 | if ext in SVS_FILE_EXT: |
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[9b18735] | 232 | # set state and plot computation if exists |
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| 233 | wx.PostEvent(parent,InvStateUpdateEvent()) |
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| 234 | wx.PostEvent(parent,FitStateUpdateEvent()) |
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[12aa9b5] | 235 | ## the output of the loader is a list , some xml files contain more than one data |
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[81812d9] | 236 | else: |
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[ef16f59] | 237 | i=0 |
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| 238 | for item in output: |
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[81812d9] | 239 | try: |
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[4da35bc] | 240 | ## Creating a Data2D with output |
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| 241 | if hasattr(item,'data'): |
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| 242 | msg = "Loading 2D data: %s"%item.filename |
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| 243 | wx.PostEvent(parent, StatusEvent(status=msg, info="info", type="stop")) |
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| 244 | new_plot = Data2D(image=None, err_image=None) |
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| 245 | |
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| 246 | else: |
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| 247 | msg = "Loading 1D data: %s"%str(item.run[0]) |
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| 248 | wx.PostEvent(parent, StatusEvent(status=msg, info="info", type="stop")) |
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| 249 | try: |
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| 250 | dx = item.dx |
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| 251 | dxl = item.dxl |
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| 252 | dxw = item.dxw |
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| 253 | except: |
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| 254 | dx = None |
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| 255 | dxl = None |
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| 256 | dxw = None |
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| 257 | |
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| 258 | new_plot = Data1D(x=item.x,y=item.y,dx=dx,dy=item.dy) |
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[ef16f59] | 259 | if dxl != None: |
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| 260 | new_plot.dxl = dxl |
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| 261 | if dxl != None: |
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| 262 | new_plot.dxw = dxw |
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| 263 | |
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| 264 | new_plot.copy_from_datainfo(item) |
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[4da35bc] | 265 | item.clone_without_data(clone=new_plot) |
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[9b18735] | 266 | # find original data file name without timestemp |
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[b35d3d1] | 267 | name = parse_name(name=str(item.run[0]), expression="_") |
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[9b18735] | 268 | max_char = name.find("[") |
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| 269 | if max_char < 0: |
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| 270 | max_char = len(name) |
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| 271 | original_name =name[0:max_char] |
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[ef16f59] | 272 | #TODO: this is a very annoying feature. We should make this |
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| 273 | # an option. Excel doesn't do this. Why should we? |
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| 274 | # What is the requirement for this feature, and are the |
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| 275 | # counter arguments stronger? Is this feature developed |
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| 276 | # to please at least 80% of the users or a special few? |
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[b35d3d1] | 277 | new_plot.name = name |
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| 278 | new_plot.interactive = True |
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[9b18735] | 279 | new_plot.group_id = original_name |
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[b35d3d1] | 280 | new_plot.id = name |
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| 281 | new_plot.is_data = True |
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[ef16f59] | 282 | title = item.filename |
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| 283 | |
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[b35d3d1] | 284 | if hasattr(item,"title"): |
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| 285 | title = item.title.lstrip().rstrip() |
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| 286 | if title == "": |
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| 287 | title = str(name) |
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| 288 | else: |
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| 289 | title = name |
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| 290 | if hasattr(parent, "panel_on_focus") and not(parent.panel_on_focus is None): |
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| 291 | existing_panel = parent.panel_on_focus |
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| 292 | panel_name = existing_panel.window_caption |
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| 293 | data_name = new_plot.name |
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| 294 | if enable_add_data(existing_panel, new_plot): |
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| 295 | if open_dialog_append_data(panel_name, data_name): |
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| 296 | #add this plot the an existing panel |
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| 297 | new_plot.group_id = existing_panel.group_id |
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[ef16f59] | 298 | # plot data |
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[b35d3d1] | 299 | wx.PostEvent(parent, NewPlotEvent(plot=new_plot, title=str(title))) |
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[9b18735] | 300 | |
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[b63dc6e] | 301 | if ext in SVS_FILE_EXT: |
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[9b18735] | 302 | # set state and plot computation if exists |
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| 303 | wx.PostEvent(parent,InvStateUpdateEvent()) |
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| 304 | wx.PostEvent(parent,FitStateUpdateEvent()) |
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[b35d3d1] | 305 | except: |
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[ef16f59] | 306 | raise |
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