source: sasview/fittingview/src/sans/perspectives/fitting/models.py @ f518eef

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Last change on this file since f518eef was f518eef, checked in by Robert Whitley <robert.whitley@…>, 12 years ago

Refs #84. Add the FractalO_Z model.

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[61184df]1"""
2    Utilities to manage models
3"""
[d89f09b]4import wx
[b30f001]5import imp
[9466f2d6]6import os
7import sys
8import math
[d89f09b]9import os.path
[33afff7]10# Time is needed by the log method
11import time
[23ccf07]12import logging
[5d1c1f4]13import py_compile
[96814e1]14import shutil
[f32d144]15from sans.guiframe.events import StatusEvent
[33afff7]16# Explicitly import from the pluginmodel module so that py2exe
17# places it in the distribution. The Model1DPlugin class is used
18# as the base class of plug-in models.
19from sans.models.pluginmodel import Model1DPlugin
[9466f2d6]20   
[f32d144]21PLUGIN_DIR = 'plugin_models'
22
[9466f2d6]23
[b30f001]24def log(message):
[5062bbf]25    """
[61184df]26        Log a message in a file located in the user's home directory
[5062bbf]27    """
[61184df]28    dir = os.path.join(os.path.expanduser("~"), '.sansview', PLUGIN_DIR)
[b30ed8f]29    out = open(os.path.join(dir, "plugins.log"), 'a')
[b30f001]30    out.write("%10g%s\n" % (time.clock(), message))
31    out.close()
32
[9466f2d6]33
[bfe4644]34def _check_plugin(model, name):
35    """
[5062bbf]36    Do some checking before model adding plugins in the list
37   
38    :param model: class model to add into the plugin list
39    :param name:name of the module plugin
40   
41    :return model: model if valid model or None if not valid
42   
[bfe4644]43    """
44    #Check is the plugin is of type Model1DPlugin
45    if not issubclass(model, Model1DPlugin):
[61184df]46        msg = "Plugin %s must be of type Model1DPlugin \n" % str(name)
[bfe4644]47        log(msg)
[8d78399]48        return None
[f32d144]49    if model.__name__ != "Model":
50        msg = "Plugin %s class name must be Model \n" % str(name)
[bfe4644]51        log(msg)
[8d78399]52        return None
[bfe4644]53    try:
[f32d144]54        new_instance = model()
[bfe4644]55    except:
[f32d144]56        msg = "Plugin %s error in __init__ \n\t: %s %s\n" % (str(name),
[61184df]57                                    str(sys.exc_type), sys.exc_value)
[bfe4644]58        log(msg)
[8d78399]59        return None
[bfe4644]60   
[f32d144]61    if hasattr(new_instance, "function"):
[bfe4644]62        try:
[f32d144]63            value = new_instance.function()
[bfe4644]64        except:
[f32d144]65            msg = "Plugin %s: error writing function \n\t :%s %s\n " % (str(name),
[61184df]66                                    str(sys.exc_type), sys.exc_value)
[f32d144]67            log(msg)
68            return None
[bfe4644]69    else:
[f32d144]70        msg = "Plugin  %s needs a method called function \n" % str(name)
71        log(msg)
72        return None
[bfe4644]73    return model
74 
[f32d144]75 
[5d1c1f4]76def find_plugins_dir():
[5062bbf]77    """
[96814e1]78        Find path of the plugins directory.
79        The plugin directory is located in the user's home directory.
[5062bbf]80    """
[61184df]81    dir = os.path.join(os.path.expanduser("~"), '.sansview', PLUGIN_DIR)
[96814e1]82   
83    # If the plugin directory doesn't exist, create it
[a0986f6]84    if not os.path.isdir(dir):
[96814e1]85        os.makedirs(dir)
86       
[8ab3302]87    # Find paths needed
88    try:
89        # For source
90        if os.path.isdir(os.path.dirname(__file__)):
[f32d144]91            p_dir = os.path.join(os.path.dirname(__file__), PLUGIN_DIR)
[8ab3302]92        else:
93            raise
94    except:
95        # Check for data path next to exe/zip file.
96        #Look for maximum n_dir up of the current dir to find plugins dir
97        n_dir = 12
98        p_dir = None
99        f_dir = os.path.join(os.path.dirname(__file__))
100        for i in range(n_dir):
101            if i > 1:
102                f_dir, _ = os.path.split(f_dir)
103            plugin_path = os.path.join(f_dir, PLUGIN_DIR)
104            if os.path.isdir(plugin_path):
105                p_dir = plugin_path
106                break
107        if not p_dir:
108            raise
[96814e1]109    # Place example user models as needed
[19e614a]110    if os.path.isdir(p_dir):
111        for file in os.listdir(p_dir):
112            file_path = os.path.join(p_dir, file)
113            if os.path.isfile(file_path):
114                if file.split(".")[-1] == 'py' and\
115                    file.split(".")[0] != '__init__':
116                    if not os.path.isfile(os.path.join(dir, file)):
117                        shutil.copy(file_path, dir)
118
[5d1c1f4]119    return dir
120
[f32d144]121
[5d1c1f4]122class ReportProblem:
123    def __nonzero__(self):
124        type, value, traceback = sys.exc_info()
125        if type is not None and issubclass(type, py_compile.PyCompileError):
126            print "Problem with", repr(value)
127            raise type, value, traceback
128        return 1
129   
130report_problem = ReportProblem()
131
[f32d144]132
[5d1c1f4]133def compile_file(dir):
134    """
135    Compile a py file
136    """
137    try:
138        import compileall
[f32d144]139        compileall.compile_dir(dir=dir, ddir=dir, force=1,
140                               quiet=report_problem)
[5d1c1f4]141    except:
142        type, value, traceback = sys.exc_info()
143        return value
144    return None
145
[f32d144]146
[5d1c1f4]147def _findModels(dir):
148    """
149    """
150    # List of plugin objects
151    plugins = {}
152    # Go through files in plug-in directory
153    #always recompile the folder plugin
154    dir = find_plugins_dir()
[a0986f6]155    if not os.path.isdir(dir):
156        msg = "SansView couldn't locate Model plugin folder."
157        msg += """ "%s" does not exist""" % dir
158        logging.warning(msg)
159        return plugins
160    else:
161        log("looking for models in: %s" % str(dir))
[5d1c1f4]162        compile_file(dir)
[a0986f6]163        logging.info("pluging model dir: %s\n" % str(dir))
[1c66bc5]164    try:
165        list = os.listdir(dir)
166        for item in list:
167            toks = os.path.splitext(os.path.basename(item))
[f32d144]168            if toks[1] == '.py' and not toks[0] == '__init__':
[1c66bc5]169                name = toks[0]
170           
171                path = [os.path.abspath(dir)]
172                file = None
173                try:
174                    (file, path, info) = imp.find_module(name, path)
[f32d144]175                    module = imp.load_module(name, file, item, info)
[1c66bc5]176                    if hasattr(module, "Model"):
177                        try:
[f32d144]178                            if _check_plugin(module.Model, name) != None:
[b2d9826]179                                plugins[name] = module.Model
[1c66bc5]180                        except:
[f32d144]181                            msg = "Error accessing Model"
182                            msg += "in %s\n  %s %s\n" % (name,
[bfe4644]183                                    str(sys.exc_type), sys.exc_value)
184                            log(msg)
[1c66bc5]185                except:
[f32d144]186                    msg = "Error accessing Model"
187                    msg += " in %s\n  %s %s \n" % (name,
[bfe4644]188                                    str(sys.exc_type), sys.exc_value)
189                    log(msg)
[1c66bc5]190                finally:
[a92d51b]191             
[f32d144]192                    if not file == None:
[1c66bc5]193                        file.close()
194    except:
[33afff7]195        # Don't deal with bad plug-in imports. Just skip.
[23ccf07]196        msg = "Could not import model plugin: %s\n" % sys.exc_value
197        log(msg)
[1c66bc5]198        pass
199    return plugins
[bb18ef1]200
[f32d144]201
[bb18ef1]202class ModelList(object):
203    """
[5062bbf]204    Contains dictionary of model and their type
[bb18ef1]205    """
206    def __init__(self):
[5062bbf]207        """
208        """
209        self.mydict = {}
[bb18ef1]210       
211    def set_list(self, name, mylist):
212        """
[5062bbf]213        :param name: the type of the list
214        :param mylist: the list to add
215       
[bb18ef1]216        """
217        if name not in self.mydict.keys():
[916f5c0]218            self.reset_list(name, mylist)
[bb18ef1]219           
[916f5c0]220    def reset_list(self, name, mylist):
221        """
222        :param name: the type of the list
223        :param mylist: the list to add
224        """
[f32d144]225        self.mydict[name] = mylist
[bb18ef1]226           
227    def get_list(self):
228        """
[5062bbf]229        return all the list stored in a dictionary object
[bb18ef1]230        """
231        return self.mydict
232       
[f32d144]233       
[bb9f322]234class ModelManagerBase:
[5062bbf]235    """
[61184df]236        Base class for the model manager
[5062bbf]237    """
[bb18ef1]238    ## external dict for models
239    model_combobox = ModelList()
240    ## Dictionary of form models
241    form_factor_dict = {}
242    ## dictionary of other
243    struct_factor_dict = {}
244    ##list of form factors
[b2d9826]245    shape_list = []
[bb18ef1]246    ## independent shape model list
247    shape_indep_list = []
[f32d144]248    ##list of structure factors
[b2d9826]249    struct_list = []
[376916c]250    ##list of model allowing multiplication
[b2d9826]251    multiplication_factor = []
[e87f9fc]252    ##list of multifunctional shapes
[b2d9826]253    multi_func_list = []
[bb18ef1]254    ## list of added models
[b2d9826]255    plugins = []
[bb18ef1]256    ## Event owner (guiframe)
[d89f09b]257    event_owner = None
[9466f2d6]258    last_time_dir_modified = 0
[f32d144]259   
[6bbeacd4]260    def __init__(self):
261        """
262        """
[b2d9826]263        self.stored_plugins = {}
[6bbeacd4]264        self._getModelList()
265       
[9466f2d6]266    def findModels(self):
267        """
268        find  plugin model in directory of plugin .recompile all file
269        in the directory if file were modified
270        """
[23ccf07]271        temp = {}
[9466f2d6]272        if self.is_changed():
[a0986f6]273            return  _findModels(dir)
[23ccf07]274        logging.info("pluging model : %s\n" % str(temp))
275        return temp
276       
[d89f09b]277    def _getModelList(self):
278        """
[5062bbf]279        List of models we want to make available by default
280        for this application
281   
282        :return: the next free event ID following the new menu events
[e7b1ccf]283       
[d89f09b]284        """
[7c8d3093]285        # regular model names only
286        self.model_name_list = []
[442895f]287        from sans.models.SphereModel import SphereModel
[bb18ef1]288        self.shape_list.append(SphereModel)
[376916c]289        self.multiplication_factor.append(SphereModel)
[7c8d3093]290        self.model_name_list.append(SphereModel.__name__)
[442895f]291       
[1a395a6]292        from sans.models.BinaryHSModel import BinaryHSModel
293        self.shape_list.append(BinaryHSModel)
[7c8d3093]294        self.model_name_list.append(BinaryHSModel.__name__)
[1a395a6]295                       
[ce07fa8]296        from sans.models.FuzzySphereModel import FuzzySphereModel
297        self.shape_list.append(FuzzySphereModel)
298        self.multiplication_factor.append(FuzzySphereModel)
[7c8d3093]299        self.model_name_list.append(FuzzySphereModel.__name__)
[3764dbd7]300                       
301        from sans.models.RaspBerryModel import RaspBerryModel
302        self.shape_list.append(RaspBerryModel)
303        self.model_name_list.append(RaspBerryModel.__name__)
304               
[442895f]305        from sans.models.CoreShellModel import CoreShellModel
[bb18ef1]306        self.shape_list.append(CoreShellModel)
[5eb9154]307        self.multiplication_factor.append(CoreShellModel)
[7c8d3093]308        self.model_name_list.append(CoreShellModel.__name__)
[4523b68]309       
[7289627]310        from sans.models.Core2ndMomentModel import Core2ndMomentModel
311        self.shape_list.append(Core2ndMomentModel)
312        self.model_name_list.append(Core2ndMomentModel.__name__)
313       
[4523b68]314        from sans.models.CoreMultiShellModel import CoreMultiShellModel
315        self.shape_list.append(CoreMultiShellModel)
316        self.multiplication_factor.append(CoreMultiShellModel)
[a1b2471]317        self.multi_func_list.append(CoreMultiShellModel)
[fb59ed9]318
[eddff027]319        from sans.models.VesicleModel import VesicleModel
320        self.shape_list.append(VesicleModel)
[5eb9154]321        self.multiplication_factor.append(VesicleModel)
[7c8d3093]322        self.model_name_list.append(VesicleModel.__name__)
[5eb9154]323       
324        from sans.models.MultiShellModel import MultiShellModel
325        self.shape_list.append(MultiShellModel)
326        self.multiplication_factor.append(MultiShellModel)
[7c8d3093]327        self.model_name_list.append(MultiShellModel.__name__)
[eddff027]328       
[1a395a6]329        from sans.models.OnionExpShellModel import OnionExpShellModel
330        self.shape_list.append(OnionExpShellModel)
331        self.multiplication_factor.append(OnionExpShellModel)
332        self.multi_func_list.append(OnionExpShellModel)
[463eb76e]333                         
[1a395a6]334        from sans.models.SphericalSLDModel import SphericalSLDModel
335        self.shape_list.append(SphericalSLDModel)
336        self.multiplication_factor.append(SphericalSLDModel)
337        self.multi_func_list.append(SphericalSLDModel)
[cee6867]338       
[d9547e7]339        from sans.models.LinearPearlsModel import LinearPearlsModel
340        self.shape_list.append(LinearPearlsModel)
341        self.model_name_list.append(LinearPearlsModel.__name__)
342         
[4ad076b]343        from sans.models.PearlNecklaceModel import PearlNecklaceModel
344        self.shape_list.append(PearlNecklaceModel)
[7c8d3093]345        self.model_name_list.append(PearlNecklaceModel.__name__)
[4ad076b]346        #self.multiplication_factor.append(PearlNecklaceModel)
347       
[eddff027]348        from sans.models.CylinderModel import CylinderModel
349        self.shape_list.append(CylinderModel)
350        self.multiplication_factor.append(CylinderModel)
[7c8d3093]351        self.model_name_list.append(CylinderModel.__name__)
[eddff027]352       
353        from sans.models.CoreShellCylinderModel import CoreShellCylinderModel
354        self.shape_list.append(CoreShellCylinderModel)
[5eb9154]355        self.multiplication_factor.append(CoreShellCylinderModel)
[7c8d3093]356        self.model_name_list.append(CoreShellCylinderModel.__name__)
[cee6867]357       
[543d1bd]358        from sans.models.CoreShellBicelleModel import CoreShellBicelleModel
359        self.shape_list.append(CoreShellBicelleModel)
360        self.multiplication_factor.append(CoreShellBicelleModel)
361        self.model_name_list.append(CoreShellBicelleModel.__name__)
362               
[cee6867]363        from sans.models.HollowCylinderModel import HollowCylinderModel
364        self.shape_list.append(HollowCylinderModel)
[5eb9154]365        self.multiplication_factor.append(HollowCylinderModel)
[7c8d3093]366        self.model_name_list.append(HollowCylinderModel.__name__)
[eddff027]367             
368        from sans.models.FlexibleCylinderModel import FlexibleCylinderModel
369        self.shape_list.append(FlexibleCylinderModel)
[7c8d3093]370        self.model_name_list.append(FlexibleCylinderModel.__name__)
[72f719b]371
[ce07fa8]372        from sans.models.FlexCylEllipXModel import FlexCylEllipXModel
373        self.shape_list.append(FlexCylEllipXModel)
[7c8d3093]374        self.model_name_list.append(FlexCylEllipXModel.__name__)
[eddff027]375       
376        from sans.models.StackedDisksModel import StackedDisksModel
377        self.shape_list.append(StackedDisksModel)
[5eb9154]378        self.multiplication_factor.append(StackedDisksModel)
[7c8d3093]379        self.model_name_list.append(StackedDisksModel.__name__)
[eddff027]380       
381        from sans.models.ParallelepipedModel import ParallelepipedModel
382        self.shape_list.append(ParallelepipedModel)
[72f719b]383        self.multiplication_factor.append(ParallelepipedModel)
[7c8d3093]384        self.model_name_list.append(ParallelepipedModel.__name__)
[cee6867]385       
[fb59ed9]386        from sans.models.CSParallelepipedModel import CSParallelepipedModel
387        self.shape_list.append(CSParallelepipedModel)
388        self.multiplication_factor.append(CSParallelepipedModel)
[7c8d3093]389        self.model_name_list.append(CSParallelepipedModel.__name__)
[fb59ed9]390       
[442895f]391        from sans.models.EllipticalCylinderModel import EllipticalCylinderModel
[bb18ef1]392        self.shape_list.append(EllipticalCylinderModel)
[72f719b]393        self.multiplication_factor.append(EllipticalCylinderModel)
[7c8d3093]394        self.model_name_list.append(EllipticalCylinderModel.__name__)
[fb59ed9]395       
396        from sans.models.BarBellModel import BarBellModel
397        self.shape_list.append(BarBellModel)
[7c8d3093]398        self.model_name_list.append(BarBellModel.__name__)
[fb59ed9]399        # not implemeted yet!
400        #self.multiplication_factor.append(BarBellModel)
401       
402        from sans.models.CappedCylinderModel import CappedCylinderModel
403        self.shape_list.append(CappedCylinderModel)
[7c8d3093]404        self.model_name_list.append(CappedCylinderModel.__name__)
[fb59ed9]405        # not implemeted yet!
406        #self.multiplication_factor.append(CappedCylinderModel)
407       
[442895f]408        from sans.models.EllipsoidModel import EllipsoidModel
[bb18ef1]409        self.shape_list.append(EllipsoidModel)
[376916c]410        self.multiplication_factor.append(EllipsoidModel)
[7c8d3093]411        self.model_name_list.append(EllipsoidModel.__name__)
[eddff027]412     
413        from sans.models.CoreShellEllipsoidModel import CoreShellEllipsoidModel
414        self.shape_list.append(CoreShellEllipsoidModel)
[5eb9154]415        self.multiplication_factor.append(CoreShellEllipsoidModel)
[7c8d3093]416        self.model_name_list.append(CoreShellEllipsoidModel.__name__)
[bb18ef1]417         
[e65050e]418        from sans.models.TriaxialEllipsoidModel import TriaxialEllipsoidModel
419        self.shape_list.append(TriaxialEllipsoidModel)
[9002927]420        self.multiplication_factor.append(TriaxialEllipsoidModel)
[7c8d3093]421        self.model_name_list.append(TriaxialEllipsoidModel.__name__)
[e65050e]422       
423        from sans.models.LamellarModel import LamellarModel
424        self.shape_list.append(LamellarModel)
[7c8d3093]425        self.model_name_list.append(LamellarModel.__name__)
[e65050e]426       
427        from sans.models.LamellarFFHGModel import LamellarFFHGModel
428        self.shape_list.append(LamellarFFHGModel)
[7c8d3093]429        self.model_name_list.append(LamellarFFHGModel.__name__)
[e65050e]430       
431        from sans.models.LamellarPSModel import LamellarPSModel
432        self.shape_list.append(LamellarPSModel)
[7c8d3093]433        self.model_name_list.append(LamellarPSModel.__name__)
[7a69683]434     
[e65050e]435        from sans.models.LamellarPSHGModel import LamellarPSHGModel
436        self.shape_list.append(LamellarPSHGModel)
[7c8d3093]437        self.model_name_list.append(LamellarPSHGModel.__name__)
[fb59ed9]438       
439        from sans.models.LamellarPCrystalModel import LamellarPCrystalModel
440        self.shape_list.append(LamellarPCrystalModel)
[7c8d3093]441        self.model_name_list.append(LamellarPCrystalModel.__name__)
[fb59ed9]442       
443        from sans.models.SCCrystalModel import SCCrystalModel
444        self.shape_list.append(SCCrystalModel)
[7c8d3093]445        self.model_name_list.append(SCCrystalModel.__name__)
[fb59ed9]446       
447        from sans.models.FCCrystalModel import FCCrystalModel
448        self.shape_list.append(FCCrystalModel)
[7c8d3093]449        self.model_name_list.append(FCCrystalModel.__name__)
[fb59ed9]450       
451        from sans.models.BCCrystalModel import BCCrystalModel
452        self.shape_list.append(BCCrystalModel)
[7c8d3093]453        self.model_name_list.append(BCCrystalModel.__name__)
[7a69683]454     
[f32d144]455        ## Structure factor
[8346667]456        from sans.models.SquareWellStructure import SquareWellStructure
[bb18ef1]457        self.struct_list.append(SquareWellStructure)
[7c8d3093]458        self.model_name_list.append(SquareWellStructure.__name__)
[8346667]459       
460        from sans.models.HardsphereStructure import HardsphereStructure
[bb18ef1]461        self.struct_list.append(HardsphereStructure)
[7c8d3093]462        self.model_name_list.append(HardsphereStructure.__name__)
[bb18ef1]463         
[8346667]464        from sans.models.StickyHSStructure import StickyHSStructure
[bb18ef1]465        self.struct_list.append(StickyHSStructure)
[7c8d3093]466        self.model_name_list.append(StickyHSStructure.__name__)
[8346667]467       
468        from sans.models.HayterMSAStructure import HayterMSAStructure
[bb18ef1]469        self.struct_list.append(HayterMSAStructure)
[7c8d3093]470        self.model_name_list.append(HayterMSAStructure.__name__)
[fb59ed9]471       
472        ##shape-independent models
[ce07fa8]473        from sans.models.PowerLawAbsModel import PowerLawAbsModel
[f32d144]474        self.shape_indep_list.append(PowerLawAbsModel)
[7c8d3093]475        self.model_name_list.append(PowerLawAbsModel.__name__)
[ce07fa8]476       
[442895f]477        from sans.models.BEPolyelectrolyte import BEPolyelectrolyte
[f32d144]478        self.shape_indep_list.append(BEPolyelectrolyte)
[7c8d3093]479        self.model_name_list.append(BEPolyelectrolyte.__name__)
[bb18ef1]480        self.form_factor_dict[str(wx.NewId())] =  [SphereModel]
[fb59ed9]481       
482        from sans.models.BroadPeakModel import BroadPeakModel
483        self.shape_indep_list.append(BroadPeakModel)
[7c8d3093]484        self.model_name_list.append(BroadPeakModel.__name__)
[fb59ed9]485       
486        from sans.models.CorrLengthModel import CorrLengthModel
487        self.shape_indep_list.append(CorrLengthModel)
[7c8d3093]488        self.model_name_list.append(CorrLengthModel.__name__)
[fb59ed9]489       
[442895f]490        from sans.models.DABModel import DABModel
[f32d144]491        self.shape_indep_list.append(DABModel)
[7c8d3093]492        self.model_name_list.append(DABModel.__name__)
[442895f]493       
[ce07fa8]494        from sans.models.DebyeModel import DebyeModel
[f32d144]495        self.shape_indep_list.append(DebyeModel)
[7c8d3093]496        self.model_name_list.append(DebyeModel.__name__)
[ce07fa8]497       
498        from sans.models.FractalModel import FractalModel
[f32d144]499        self.shape_indep_list.append(FractalModel)
[7c8d3093]500        self.model_name_list.append(FractalModel.__name__)
[bb18ef1]501       
[fb59ed9]502        from sans.models.FractalCoreShellModel import FractalCoreShellModel
[f32d144]503        self.shape_indep_list.append(FractalCoreShellModel)
[7c8d3093]504        self.model_name_list.append(FractalCoreShellModel.__name__)
[fb59ed9]505       
506        from sans.models.GaussLorentzGelModel import GaussLorentzGelModel
[f32d144]507        self.shape_indep_list.append(GaussLorentzGelModel)
[7c8d3093]508        self.model_name_list.append(GaussLorentzGelModel.__name__)
[fb59ed9]509               
510        from sans.models.GuinierModel import GuinierModel
[f32d144]511        self.shape_indep_list.append(GuinierModel)
[7c8d3093]512        self.model_name_list.append(GuinierModel.__name__)
[fb59ed9]513       
514        from sans.models.GuinierPorodModel import GuinierPorodModel
[f32d144]515        self.shape_indep_list.append(GuinierPorodModel)
[7c8d3093]516        self.model_name_list.append(GuinierPorodModel.__name__)
[fb59ed9]517
[ce07fa8]518        from sans.models.LorentzModel import LorentzModel
[f32d144]519        self.shape_indep_list.append(LorentzModel)
[7c8d3093]520        self.model_name_list.append(LorentzModel.__name__)
[51da9dc]521
522        from sans.models.MassFractalModel import MassFractalModel
523        self.shape_indep_list.append(MassFractalModel)
524        self.model_name_list.append(MassFractalModel.__name__)
525       
526        from sans.models.MassSurfaceFractal import MassSurfaceFractal
527        self.shape_indep_list.append(MassSurfaceFractal)
528        self.model_name_list.append(MassSurfaceFractal.__name__)
[442895f]529       
[cee6867]530        from sans.models.PeakGaussModel import PeakGaussModel
531        self.shape_indep_list.append(PeakGaussModel)
[7c8d3093]532        self.model_name_list.append(PeakGaussModel.__name__)
[cee6867]533       
534        from sans.models.PeakLorentzModel import PeakLorentzModel
535        self.shape_indep_list.append(PeakLorentzModel)
[f32d144]536        self.model_name_list.append(PeakLorentzModel.__name__)
[cee6867]537       
[ce07fa8]538        from sans.models.Poly_GaussCoil import Poly_GaussCoil
539        self.shape_indep_list.append(Poly_GaussCoil)
[7c8d3093]540        self.model_name_list.append(Poly_GaussCoil.__name__)
[fb59ed9]541       
542        from sans.models.PolymerExclVolume import PolymerExclVolume
543        self.shape_indep_list.append(PolymerExclVolume)
[7c8d3093]544        self.model_name_list.append(PolymerExclVolume.__name__)
[fb59ed9]545       
[ce07fa8]546        from sans.models.PorodModel import PorodModel
[f32d144]547        self.shape_indep_list.append(PorodModel)
548        self.model_name_list.append(PorodModel.__name__)
[442895f]549       
[fb59ed9]550        from sans.models.RPA10Model import RPA10Model
551        self.shape_indep_list.append(RPA10Model)
552        self.multi_func_list.append(RPA10Model)
[51da9dc]553
554        from sans.models.SurfaceFractalModel import SurfaceFractalModel
555        self.shape_indep_list.append(SurfaceFractalModel)
556        self.model_name_list.append(SurfaceFractalModel.__name__)
[81bece4]557       
[442895f]558        from sans.models.TeubnerStreyModel import TeubnerStreyModel
[f32d144]559        self.shape_indep_list.append(TeubnerStreyModel)
[7c8d3093]560        self.model_name_list.append(TeubnerStreyModel.__name__)
[a269378]561
[fb59ed9]562        from sans.models.TwoLorentzianModel import TwoLorentzianModel
[f32d144]563        self.shape_indep_list.append(TwoLorentzianModel)
[7c8d3093]564        self.model_name_list.append(TwoLorentzianModel.__name__)
[fb59ed9]565       
566        from sans.models.TwoPowerLawModel import TwoPowerLawModel
[f32d144]567        self.shape_indep_list.append(TwoPowerLawModel)
[7c8d3093]568        self.model_name_list.append(TwoPowerLawModel.__name__)
[fb59ed9]569       
570        from sans.models.UnifiedPowerRgModel import UnifiedPowerRgModel
[f32d144]571        self.shape_indep_list.append(UnifiedPowerRgModel)
[fb59ed9]572        self.multi_func_list.append(UnifiedPowerRgModel)
[5da3cc5]573
[eddff027]574        from sans.models.LineModel import LineModel
575        self.shape_indep_list.append(LineModel)
[7c8d3093]576        self.model_name_list.append(LineModel.__name__)
[5062bbf]577       
[fb59ed9]578        from sans.models.ReflectivityModel import ReflectivityModel
[19e614a]579        self.shape_indep_list.append(ReflectivityModel)
[fb59ed9]580        self.multi_func_list.append(ReflectivityModel)
[1cc23fd]581       
582        from sans.models.ReflectivityIIModel import ReflectivityIIModel
[19e614a]583        self.shape_indep_list.append(ReflectivityIIModel)
[1cc23fd]584        self.multi_func_list.append(ReflectivityIIModel)
[0da4eba]585       
586        from sans.models.GelFitModel import GelFitModel
587        self.shape_indep_list.append(GelFitModel)
588        self.model_name_list.append(GelFitModel.__name__)
[f518eef]589       
590        from sans.models.FractalO_Z import FractalO_Z
591        self.shape_indep_list.append(FractalO_Z)
592        self.model_name_list.append(FractalO_Z.__name__)
[fb59ed9]593   
[49b7efa]594        #Looking for plugins
[9466f2d6]595        self.stored_plugins = self.findModels()
[b2d9826]596        self.plugins = self.stored_plugins.values()
[19e614a]597
[b2d9826]598        self._get_multifunc_models()
599       
[d89f09b]600        return 0
601
[9466f2d6]602    def is_changed(self):
603        """
604        check the last time the plugin dir has changed and return true
605         is the directory was modified else return false
606        """
607        is_modified = False
[96814e1]608        plugin_dir = find_plugins_dir()
609        if os.path.isdir(plugin_dir):
[f32d144]610            temp = os.path.getmtime(plugin_dir)
[9466f2d6]611            if  self.last_time_dir_modified != temp:
612                is_modified = True
613                self.last_time_dir_modified = temp
[bb9f322]614       
[9466f2d6]615        return is_modified
[d89f09b]616   
[b2d9826]617    def update(self):
618        """
[f32d144]619        return a dictionary of model if
[9466f2d6]620        new models were added else return empty dictionary
[b2d9826]621        """
[9466f2d6]622        new_plugins = self.findModels()
623        if len(new_plugins) > 0:
624            for name, plug in  new_plugins.iteritems():
625                if name not in self.stored_plugins.keys():
626                    self.stored_plugins[name] = plug
627                    self.plugins.append(plug)
628            self.model_combobox.set_list("Customized Models", self.plugins)
629            return self.model_combobox.get_list()
630        else:
631            return {}
[5d1c1f4]632   
[916f5c0]633    def pulgins_reset(self):
634        """
635        return a dictionary of model
636        """
637        self.plugins = []
638        new_plugins = _findModels(dir)
639        for name, plug in  new_plugins.iteritems():
640            for stored_name, stored_plug in self.stored_plugins.iteritems():
641                if name == stored_name:
642                    del self.stored_plugins[name]
643                    break
644            self.stored_plugins[name] = plug
645            self.plugins.append(plug)
[19e614a]646
[916f5c0]647        self.model_combobox.reset_list("Customized Models", self.plugins)
648        return self.model_combobox.get_list()
649       
[d89f09b]650    def populate_menu(self, modelmenu, event_owner):
651        """
[5062bbf]652        Populate a menu with our models
653       
654        :param id: first menu event ID to use when binding the menu events
655        :param modelmenu: wx.Menu object to populate
656        :param event_owner: wx object to bind the menu events to
657       
658        :return: the next free event ID following the new menu events
659       
[d89f09b]660        """
[bb18ef1]661        ## Fill model lists
[d89f09b]662        self._getModelList()
[bb18ef1]663        ## store reference to model menu of guiframe
664        self.modelmenu = modelmenu
665        ## guiframe reference
[d89f09b]666        self.event_owner = event_owner
[bb18ef1]667       
668        shape_submenu = wx.Menu()
669        shape_indep_submenu = wx.Menu()
670        structure_factor = wx.Menu()
[b30f001]671        added_models = wx.Menu()
[376916c]672        multip_models = wx.Menu()
[bb18ef1]673        ## create menu with shape
[f32d144]674        self._fill_simple_menu(menuinfo=["Shapes",
675                                         shape_submenu,
676                                         " simple shape"],
[5062bbf]677                         list1=self.shape_list)
[376916c]678       
[f32d144]679        self._fill_simple_menu(menuinfo=["Shape-Independent",
680                                         shape_indep_submenu,
681                                         "List of shape-independent models"],
682                         list1=self.shape_indep_list)
[bb18ef1]683       
[f32d144]684        self._fill_simple_menu(menuinfo=["Structure Factors",
685                                         structure_factor,
686                                         "List of Structure factors models"],
[5062bbf]687                                list1=self.struct_list)
[bb18ef1]688       
[5062bbf]689        self._fill_plugin_menu(menuinfo=["Customized Models", added_models,
[376916c]690                                            "List of additional models"],
[5062bbf]691                                 list1=self.plugins)
[376916c]692       
[f32d144]693        self._fill_menu(menuinfo=["P(Q)*S(Q)", multip_models,
[376916c]694                                  "mulplication of 2 models"],
[f32d144]695                                   list1=self.multiplication_factor,
696                                   list2=self.struct_list)
[d89f09b]697        return 0
698   
[5062bbf]699    def _fill_plugin_menu(self, menuinfo, list1):
[bfe4644]700        """
[5062bbf]701        fill the plugin menu with costumized models
[bfe4644]702        """
[f32d144]703        if len(list1) == 0:
704            id = wx.NewId()
705            msg = "No model available check plugins.log for errors to fix problem"
706            menuinfo[1].Append(int(id), "Empty", msg)
707        self._fill_simple_menu(menuinfo, list1)
[bfe4644]708       
[5062bbf]709    def _fill_simple_menu(self, menuinfo, list1):
[bb18ef1]710        """
[5062bbf]711        Fill the menu with list item
712       
713        :param modelmenu: the menu to fill
714        :param menuinfo: submenu item for the first column of this modelmenu
715                         with info.Should be a list :
716                         [name(string) , menu(wx.menu), help(string)]
717        :param list1: contains item (form factor )to fill modelmenu second column
718       
[bb18ef1]719        """
[f32d144]720        if len(list1) > 0:
721            self.model_combobox.set_list(menuinfo[0], list1)
[e7b1ccf]722           
[bb18ef1]723            for item in list1:
[e7b1ccf]724                try:
[f32d144]725                    id = wx.NewId()
726                    struct_factor = item()
[e7b1ccf]727                    struct_name = struct_factor.__class__.__name__
728                    if hasattr(struct_factor, "name"):
729                        struct_name = struct_factor.name
730                       
[f32d144]731                    menuinfo[1].Append(int(id), struct_name, struct_name)
[e7b1ccf]732                    if not  item in self.struct_factor_dict.itervalues():
[f32d144]733                        self.struct_factor_dict[str(id)] = item
[e7b1ccf]734                    wx.EVT_MENU(self.event_owner, int(id), self._on_model)
735                except:
[f32d144]736                    msg = "Error Occured: %s" % sys.exc_value
[e7b1ccf]737                    wx.PostEvent(self.event_owner, StatusEvent(status=msg))
[bb18ef1]738               
[f32d144]739        id = wx.NewId()
740        self.modelmenu.AppendMenu(id, menuinfo[0], menuinfo[1], menuinfo[2])
[bb18ef1]741       
[5062bbf]742    def _fill_menu(self, menuinfo, list1, list2):
[bb18ef1]743        """
[5062bbf]744        Fill the menu with list item
745       
746        :param menuinfo: submenu item for the first column of this modelmenu
747                         with info.Should be a list :
748                         [name(string) , menu(wx.menu), help(string)]
749        :param list1: contains item (form factor )to fill modelmenu second column
[f32d144]750        :param list2: contains item (Structure factor )to fill modelmenu
[5062bbf]751                third column
752               
[bb18ef1]753        """
[f32d144]754        if len(list1) > 0:
755            self.model_combobox.set_list(menuinfo[0], list1)
[bb18ef1]756           
[f32d144]757            for item in list1:
758                form_factor = item()
[bb18ef1]759                form_name = form_factor.__class__.__name__
760                if hasattr(form_factor, "name"):
761                    form_name = form_factor.name
[f32d144]762                ### store form factor to return to other users
763                newmenu = wx.Menu()
764                if len(list2) > 0:
[bb18ef1]765                    for model  in list2:
766                        id = wx.NewId()
767                        struct_factor = model()
768                        name = struct_factor.__class__.__name__
769                        if hasattr(struct_factor, "name"):
770                            name = struct_factor.name
[f32d144]771                        newmenu.Append(id, name, name)
[bb18ef1]772                        wx.EVT_MENU(self.event_owner, int(id), self._on_model)
773                        ## save form_fact and struct_fact
[f32d144]774                        self.form_factor_dict[int(id)] = [form_factor,
775                                                          struct_factor]
[bb18ef1]776                       
[f32d144]777                form_id = wx.NewId()
778                menuinfo[1].AppendMenu(int(form_id), form_name,
779                                       newmenu, menuinfo[2])
780        id = wx.NewId()
781        self.modelmenu.AppendMenu(id, menuinfo[0], menuinfo[1], menuinfo[2])
[bb18ef1]782       
[d89f09b]783    def _on_model(self, evt):
784        """
[5062bbf]785        React to a model menu event
786       
787        :param event: wx menu event
788       
[d89f09b]789        """
[bb18ef1]790        if int(evt.GetId()) in self.form_factor_dict.keys():
791            from sans.models.MultiplicationModel import MultiplicationModel
792            model1, model2 = self.form_factor_dict[int(evt.GetId())]
[f32d144]793            model = MultiplicationModel(model1, model2)
[bb18ef1]794        else:
[f32d144]795            model = self.struct_factor_dict[str(evt.GetId())]()
[61184df]796       
797        #TODO: investigate why the following two lines were left in the code
798        #      even though the ModelEvent class doesn't exist
799        #evt = ModelEvent(model=model)
800        #wx.PostEvent(self.event_owner, evt)
[d89f09b]801       
[fb59ed9]802    def _get_multifunc_models(self):
803        """
804        Get the multifunctional models
805        """
806        for item in self.plugins:
807            try:
808                # check the multiplicity if any
809                if item.multiplicity_info[0] > 1:
810                    self.multi_func_list.append(item)
811            except:
812                # pass to other items
813                pass
814                   
[f32d144]815    def get_model_list(self):
[5062bbf]816        """
[f32d144]817        return dictionary of models for fitpanel use
[5062bbf]818       
819        """
[6bbeacd4]820        self.model_combobox.set_list("Shapes", self.shape_list)
[f32d144]821        self.model_combobox.set_list("Shape-Independent",
822                                     self.shape_indep_list)
[6bbeacd4]823        self.model_combobox.set_list("Structure Factors", self.struct_list)
824        self.model_combobox.set_list("Customized Models", self.plugins)
825        self.model_combobox.set_list("P(Q)*S(Q)", self.multiplication_factor)
[f32d144]826        self.model_combobox.set_list("multiplication",
827                                     self.multiplication_factor)
[e87f9fc]828        self.model_combobox.set_list("Multi-Functions", self.multi_func_list)
[b2d9826]829        return self.model_combobox.get_list()
[d89f09b]830   
[7c8d3093]831    def get_model_name_list(self):
832        """
833        return regular model name list
834        """
835        return self.model_name_list
[376916c]836 
[bb18ef1]837       
[bb9f322]838class ModelManager(object):
839    """
[f32d144]840    implement model
[bb9f322]841    """
842    __modelmanager = ModelManagerBase()
843   
844    def findModels(self):
845        return self.__modelmanager.findModels()
846   
847    def _getModelList(self):
848        return self.__modelmanager._getModelList()
849   
850    def is_changed(self):
851        return self.__modelmanager.is_changed()
852   
853    def update(self):
854        return self.__modelmanager.update()
855   
[916f5c0]856    def pulgins_reset(self):
857        return self.__modelmanager.pulgins_reset()
858   
[bb9f322]859    def populate_menu(self, modelmenu, event_owner):
860        return self.__modelmanager.populate_menu(modelmenu, event_owner)
861   
862    def _on_model(self, evt):
863        return self.__modelmanager._on_model(evt)
864   
865    def _get_multifunc_models(self):
866        return self.__modelmanager._get_multifunc_models()
867   
[f32d144]868    def get_model_list(self):
[bb9f322]869        return self.__modelmanager.get_model_list()
[bb18ef1]870   
[7c8d3093]871    def get_model_name_list(self):
872        return self.__modelmanager.get_model_name_list()
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