source: sasview/calculator/slit_length_calculator.py @ e6093db

ESS_GUIESS_GUI_DocsESS_GUI_batch_fittingESS_GUI_bumps_abstractionESS_GUI_iss1116ESS_GUI_iss879ESS_GUI_iss959ESS_GUI_openclESS_GUI_orderingESS_GUI_sync_sascalccostrafo411magnetic_scattrelease-4.1.1release-4.1.2release-4.2.2release_4.0.1ticket-1009ticket-1094-headlessticket-1242-2d-resolutionticket-1243ticket-1249ticket885unittest-saveload
Last change on this file since e6093db was 0bf2c6f, checked in by Jae Cho <jhjcho@…>, 14 years ago

slit length calculator and sample data and unit test: GUI is not done yet

  • Property mode set to 100644
File size: 3.3 KB
Line 
1"""
2This software was developed by the University of Tennessee as part of the
3Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
4project funded by the US National Science Foundation.
5
6See the license text in license.txt
7
8copyright 2008, 2009, University of Tennessee
9"""
10from numpy import *
11
12class SlitlengthCalculator(object):
13    """
14        compute slit length from SAXSess beam profile (1st col. Q , 2nd col. I , and 3rd col. dI.: don't need the 3rd)
15        @object: data where are data.y and data.x
16    """
17    def __init__(self):
18       
19        # x data
20        self.x = None
21        # y data
22        self.y = None
23        #default slit length
24        self.slit_length = 0.0
25       
26        # The unit is unknown from SAXSess profile:
27        # It seems 1/nm but it could be not fixed,
28        # so users should be notified to determine the unit by themselves.
29        self.slit_length_unit = "unknown"
30   
31    def set_data(self, x=None, y=None):
32        """
33            set data
34            @ Param x, y: x array and y array
35        """
36        self.x = x
37        self.y = y
38       
39       
40    def calculate_slit_length(self):
41        """
42            Calculate slit length using 10 max point
43            ToDo: Near future, it should be re-factored in better method.
44        """
45        # None data do nothing
46        if self.y == None or self.x == None:
47            return
48       
49        # set local variable
50        y = self.y
51        x = self.x
52
53        # find max y
54        max_y = y.max()
55       
56        # initial values
57        y_sum = 0.0
58        y_max = 0.0
59        ind = 0.0
60       
61        # sum 10 or more y values until getting max_y,
62        while (True):
63            if ind >= 10 and y_max == max_y:
64                break
65            y_sum = y_sum + y[ind]
66            if y[ind] > y_max: y_max = y[ind]
67            ind += 1
68     
69        # find the average value/2 of the top values 
70        y_half = y_sum/(2.0*ind)
71       
72        # defaults
73        y_half_d = 0.0
74        ind = 0.0
75        # find indices where it crosses y = y_half.
76        while (True):
77            ind += 1                # no need to check when ind == 0
78            y_half_d = y[ind]       # y value and ind just after passed the spot of the half height
79            if y[ind] < y_half: break
80   
81        y_half_u = y[ind-1]         # y value and ind just before passed the spot of the half height
82       
83        # get corresponding x values
84        x_half_d = x[ind]
85        x_half_u = x[ind-1] 
86       
87        # calculate x at y = y_half using linear interpolation
88        if y_half_u == y_half_d:
89            x_half = (x_half_d + x_half_u)/2.0
90        else:
91            x_half = (x_half_u * (y_half - y_half_d) + x_half_d*(y_half_u-y_half))/(y_half_u - y_half_d)
92       
93        # multiply by 2 due to the beam profile is for half beam
94        slit_length = 2.0 * x_half
95       
96        # set slit_length
97        self.slit_length = slit_length
98   
99    def get_slit_length(self): 
100        """
101            Calculate and return the slit length
102        """
103        self.calculate_slit_length()
104        return self.slit_length
105       
106    def get_slit_length_unit(self): 
107        """
108            return the slit length unit
109        """
110        return self.slit_length_unit
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