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50 | <h1>Source code for sas.data_util.err1d</h1><div class="highlight"><pre> |
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51 | <span class="c"># This program is public domain</span> |
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52 | <span class="sd">"""</span> |
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53 | <span class="sd">Error propogation algorithms for simple arithmetic</span> |
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54 | |
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55 | <span class="sd">Warning: like the underlying numpy library, the inplace operations</span> |
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56 | <span class="sd">may return values of the wrong type if some of the arguments are</span> |
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57 | <span class="sd">integers, so be sure to create them with floating point inputs.</span> |
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58 | <span class="sd">"""</span> |
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59 | <span class="kn">from</span> <span class="nn">__future__</span> <span class="kn">import</span> <span class="n">division</span> <span class="c"># Get true division</span> |
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60 | <span class="kn">import</span> <span class="nn">numpy</span> |
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61 | |
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62 | |
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63 | <div class="viewcode-block" id="div"><a class="viewcode-back" href="../../../dev/api/sas.data_util.html#sas.data_util.err1d.div">[docs]</a><span class="k">def</span> <span class="nf">div</span><span class="p">(</span><span class="n">X</span><span class="p">,</span> <span class="n">varX</span><span class="p">,</span> <span class="n">Y</span><span class="p">,</span> <span class="n">varY</span><span class="p">):</span> |
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64 | <span class="sd">"""Division with error propagation"""</span> |
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65 | <span class="c"># Direct algorithm:</span> |
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66 | <span class="c"># Z = X/Y</span> |
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67 | <span class="c"># varZ = (varX/X**2 + varY/Y**2) * Z**2</span> |
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68 | <span class="c"># = (varX + varY * Z**2) / Y**2</span> |
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69 | <span class="c"># Indirect algorithm to minimize intermediates</span> |
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70 | <span class="n">Z</span> <span class="o">=</span> <span class="n">X</span><span class="o">/</span><span class="n">Y</span> <span class="c"># truediv => Z is a float</span> |
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71 | <span class="n">varZ</span> <span class="o">=</span> <span class="n">Z</span><span class="o">**</span><span class="mi">2</span> <span class="c"># Z is a float => varZ is a float</span> |
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72 | <span class="n">varZ</span> <span class="o">*=</span> <span class="n">varY</span> |
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73 | <span class="n">varZ</span> <span class="o">+=</span> <span class="n">varX</span> |
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74 | <span class="n">T</span> <span class="o">=</span> <span class="n">Y</span><span class="o">**</span><span class="mi">2</span> <span class="c"># Doesn't matter if T is float or int</span> |
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75 | <span class="n">varZ</span> <span class="o">/=</span> <span class="n">T</span> |
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76 | <span class="k">return</span> <span class="n">Z</span><span class="p">,</span> <span class="n">varZ</span> |
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77 | |
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78 | </div> |
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79 | <div class="viewcode-block" id="mul"><a class="viewcode-back" href="../../../dev/api/sas.data_util.html#sas.data_util.err1d.mul">[docs]</a><span class="k">def</span> <span class="nf">mul</span><span class="p">(</span><span class="n">X</span><span class="p">,</span> <span class="n">varX</span><span class="p">,</span> <span class="n">Y</span><span class="p">,</span> <span class="n">varY</span><span class="p">):</span> |
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80 | <span class="sd">"""Multiplication with error propagation"""</span> |
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81 | <span class="c"># Direct algorithm:</span> |
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82 | <span class="n">Z</span> <span class="o">=</span> <span class="n">X</span> <span class="o">*</span> <span class="n">Y</span> |
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83 | <span class="n">varZ</span> <span class="o">=</span> <span class="n">Y</span><span class="o">**</span><span class="mi">2</span> <span class="o">*</span> <span class="n">varX</span> <span class="o">+</span> <span class="n">X</span><span class="o">**</span><span class="mi">2</span> <span class="o">*</span> <span class="n">varY</span> |
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84 | <span class="c"># Indirect algorithm won't ensure floating point results</span> |
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85 | <span class="c"># varZ = Y**2</span> |
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86 | <span class="c"># varZ *= varX</span> |
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87 | <span class="c"># Z = X**2 # Using Z to hold the temporary</span> |
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88 | <span class="c"># Z *= varY</span> |
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89 | <span class="c"># varZ += Z</span> |
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90 | <span class="c"># Z[:] = X</span> |
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91 | <span class="c"># Z *= Y</span> |
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92 | <span class="k">return</span> <span class="n">Z</span><span class="p">,</span> <span class="n">varZ</span> |
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93 | |
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94 | </div> |
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95 | <div class="viewcode-block" id="sub"><a class="viewcode-back" href="../../../dev/api/sas.data_util.html#sas.data_util.err1d.sub">[docs]</a><span class="k">def</span> <span class="nf">sub</span><span class="p">(</span><span class="n">X</span><span class="p">,</span> <span class="n">varX</span><span class="p">,</span> <span class="n">Y</span><span class="p">,</span> <span class="n">varY</span><span class="p">):</span> |
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96 | <span class="sd">"""Subtraction with error propagation"""</span> |
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97 | <span class="n">Z</span> <span class="o">=</span> <span class="n">X</span> <span class="o">-</span> <span class="n">Y</span> |
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98 | <span class="n">varZ</span> <span class="o">=</span> <span class="n">varX</span> <span class="o">+</span> <span class="n">varY</span> |
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99 | <span class="k">return</span> <span class="n">Z</span><span class="p">,</span> <span class="n">varZ</span> |
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100 | |
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101 | </div> |
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102 | <div class="viewcode-block" id="add"><a class="viewcode-back" href="../../../dev/api/sas.data_util.html#sas.data_util.err1d.add">[docs]</a><span class="k">def</span> <span class="nf">add</span><span class="p">(</span><span class="n">X</span><span class="p">,</span> <span class="n">varX</span><span class="p">,</span> <span class="n">Y</span><span class="p">,</span> <span class="n">varY</span><span class="p">):</span> |
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103 | <span class="sd">"""Addition with error propagation"""</span> |
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104 | <span class="n">Z</span> <span class="o">=</span> <span class="n">X</span> <span class="o">+</span> <span class="n">Y</span> |
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105 | <span class="n">varZ</span> <span class="o">=</span> <span class="n">varX</span> <span class="o">+</span> <span class="n">varY</span> |
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106 | <span class="k">return</span> <span class="n">Z</span><span class="p">,</span> <span class="n">varZ</span> |
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107 | |
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108 | </div> |
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109 | <div class="viewcode-block" id="exp"><a class="viewcode-back" href="../../../dev/api/sas.data_util.html#sas.data_util.err1d.exp">[docs]</a><span class="k">def</span> <span class="nf">exp</span><span class="p">(</span><span class="n">X</span><span class="p">,</span> <span class="n">varX</span><span class="p">):</span> |
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110 | <span class="sd">"""Exponentiation with error propagation"""</span> |
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111 | <span class="n">Z</span> <span class="o">=</span> <span class="n">numpy</span><span class="o">.</span><span class="n">exp</span><span class="p">(</span><span class="n">X</span><span class="p">)</span> |
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112 | <span class="n">varZ</span> <span class="o">=</span> <span class="n">varX</span> <span class="o">*</span> <span class="n">Z</span><span class="o">**</span><span class="mi">2</span> |
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113 | <span class="k">return</span> <span class="n">Z</span><span class="p">,</span> <span class="n">varZ</span> |
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114 | |
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115 | </div> |
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116 | <div class="viewcode-block" id="log"><a class="viewcode-back" href="../../../dev/api/sas.data_util.html#sas.data_util.err1d.log">[docs]</a><span class="k">def</span> <span class="nf">log</span><span class="p">(</span><span class="n">X</span><span class="p">,</span> <span class="n">varX</span><span class="p">):</span> |
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117 | <span class="sd">"""Logarithm with error propagation"""</span> |
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118 | <span class="n">Z</span> <span class="o">=</span> <span class="n">numpy</span><span class="o">.</span><span class="n">log</span><span class="p">(</span><span class="n">X</span><span class="p">)</span> |
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119 | <span class="n">varZ</span> <span class="o">=</span> <span class="n">varX</span> <span class="o">/</span> <span class="n">X</span><span class="o">**</span><span class="mi">2</span> |
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120 | <span class="k">return</span> <span class="n">Z</span><span class="p">,</span> <span class="n">varZ</span> |
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121 | |
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122 | <span class="c"># Confirm this formula before using it</span> |
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123 | <span class="c"># def pow(X,varX, Y,varY):</span> |
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124 | <span class="c"># Z = X**Y</span> |
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125 | <span class="c"># varZ = (Y**2 * varX/X**2 + varY * numpy.log(X)**2) * Z**2</span> |
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126 | <span class="c"># return Z,varZ</span> |
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127 | <span class="c">#</span> |
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128 | |
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129 | </div> |
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130 | <div class="viewcode-block" id="pow"><a class="viewcode-back" href="../../../dev/api/sas.data_util.html#sas.data_util.err1d.pow">[docs]</a><span class="k">def</span> <span class="nf">pow</span><span class="p">(</span><span class="n">X</span><span class="p">,</span> <span class="n">varX</span><span class="p">,</span> <span class="n">n</span><span class="p">):</span> |
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131 | <span class="sd">"""X**n with error propagation"""</span> |
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132 | <span class="c"># Direct algorithm</span> |
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133 | <span class="c"># Z = X**n</span> |
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134 | <span class="c"># varZ = n*n * varX/X**2 * Z**2</span> |
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135 | <span class="c"># Indirect algorithm to minimize intermediates</span> |
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136 | <span class="n">Z</span> <span class="o">=</span> <span class="n">X</span><span class="o">**</span><span class="n">n</span> |
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137 | <span class="n">varZ</span> <span class="o">=</span> <span class="n">varX</span> <span class="o">/</span> <span class="n">X</span> |
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138 | <span class="n">varZ</span> <span class="o">/=</span> <span class="n">X</span> |
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139 | <span class="n">varZ</span> <span class="o">*=</span> <span class="n">Z</span> |
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140 | <span class="n">varZ</span> <span class="o">*=</span> <span class="n">Z</span> |
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141 | <span class="n">varZ</span> <span class="o">*=</span> <span class="n">n</span><span class="o">**</span><span class="mi">2</span> |
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142 | <span class="k">return</span> <span class="n">Z</span><span class="p">,</span> <span class="n">varZ</span> |
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143 | |
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144 | </div> |
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145 | <div class="viewcode-block" id="div_inplace"><a class="viewcode-back" href="../../../dev/api/sas.data_util.html#sas.data_util.err1d.div_inplace">[docs]</a><span class="k">def</span> <span class="nf">div_inplace</span><span class="p">(</span><span class="n">X</span><span class="p">,</span> <span class="n">varX</span><span class="p">,</span> <span class="n">Y</span><span class="p">,</span> <span class="n">varY</span><span class="p">):</span> |
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146 | <span class="sd">"""In-place division with error propagation"""</span> |
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147 | <span class="c"># Z = X/Y</span> |
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148 | <span class="c"># varZ = (varX + varY * (X/Y)**2) / Y**2 = (varX + varY * Z**2) / Y**2</span> |
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149 | <span class="n">X</span> <span class="o">/=</span> <span class="n">Y</span> <span class="c"># X now has Z = X/Y</span> |
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150 | <span class="n">T</span> <span class="o">=</span> <span class="n">X</span><span class="o">**</span><span class="mi">2</span> <span class="c"># create T with Z**2</span> |
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151 | <span class="n">T</span> <span class="o">*=</span> <span class="n">varY</span> <span class="c"># T now has varY * Z**2</span> |
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152 | <span class="n">varX</span> <span class="o">+=</span> <span class="n">T</span> <span class="c"># varX now has varX + varY*Z**2</span> |
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153 | <span class="k">del</span> <span class="n">T</span> <span class="c"># may want to use T[:] = Y for vectors</span> |
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154 | <span class="n">T</span> <span class="o">=</span> <span class="n">Y</span> <span class="c"># reuse T for Y</span> |
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155 | <span class="n">T</span> <span class="o">**=</span> <span class="mi">2</span> <span class="c"># T now has Y**2</span> |
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156 | <span class="n">varX</span> <span class="o">/=</span> <span class="n">T</span> <span class="c"># varX now has varZ</span> |
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157 | <span class="k">return</span> <span class="n">X</span><span class="p">,</span> <span class="n">varX</span> |
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158 | |
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159 | </div> |
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160 | <div class="viewcode-block" id="mul_inplace"><a class="viewcode-back" href="../../../dev/api/sas.data_util.html#sas.data_util.err1d.mul_inplace">[docs]</a><span class="k">def</span> <span class="nf">mul_inplace</span><span class="p">(</span><span class="n">X</span><span class="p">,</span> <span class="n">varX</span><span class="p">,</span> <span class="n">Y</span><span class="p">,</span> <span class="n">varY</span><span class="p">):</span> |
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161 | <span class="sd">"""In-place multiplication with error propagation"""</span> |
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162 | <span class="c"># Z = X * Y</span> |
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163 | <span class="c"># varZ = Y**2 * varX + X**2 * varY</span> |
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164 | <span class="n">T</span> <span class="o">=</span> <span class="n">Y</span><span class="o">**</span><span class="mi">2</span> <span class="c"># create T with Y**2</span> |
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165 | <span class="n">varX</span> <span class="o">*=</span> <span class="n">T</span> <span class="c"># varX now has Y**2 * varX</span> |
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166 | <span class="k">del</span> <span class="n">T</span> <span class="c"># may want to use T[:] = X for vectors</span> |
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167 | <span class="n">T</span> <span class="o">=</span> <span class="n">X</span> <span class="c"># reuse T for X**2 * varY</span> |
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168 | <span class="n">T</span> <span class="o">**=</span><span class="mi">2</span> <span class="c"># T now has X**2</span> |
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169 | <span class="n">T</span> <span class="o">*=</span> <span class="n">varY</span> <span class="c"># T now has X**2 * varY</span> |
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170 | <span class="n">varX</span> <span class="o">+=</span> <span class="n">T</span> <span class="c"># varX now has varZ</span> |
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171 | <span class="n">X</span> <span class="o">*=</span> <span class="n">Y</span> <span class="c"># X now has Z</span> |
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172 | <span class="k">return</span> <span class="n">X</span><span class="p">,</span> <span class="n">varX</span> |
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173 | |
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174 | </div> |
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175 | <div class="viewcode-block" id="sub_inplace"><a class="viewcode-back" href="../../../dev/api/sas.data_util.html#sas.data_util.err1d.sub_inplace">[docs]</a><span class="k">def</span> <span class="nf">sub_inplace</span><span class="p">(</span><span class="n">X</span><span class="p">,</span> <span class="n">varX</span><span class="p">,</span> <span class="n">Y</span><span class="p">,</span> <span class="n">varY</span><span class="p">):</span> |
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176 | <span class="sd">"""In-place subtraction with error propagation"""</span> |
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177 | <span class="c"># Z = X - Y</span> |
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178 | <span class="c"># varZ = varX + varY</span> |
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179 | <span class="n">X</span> <span class="o">-=</span> <span class="n">Y</span> |
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180 | <span class="n">varX</span> <span class="o">+=</span> <span class="n">varY</span> |
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181 | <span class="k">return</span> <span class="n">X</span><span class="p">,</span> <span class="n">varX</span> |
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182 | |
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183 | </div> |
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184 | <div class="viewcode-block" id="add_inplace"><a class="viewcode-back" href="../../../dev/api/sas.data_util.html#sas.data_util.err1d.add_inplace">[docs]</a><span class="k">def</span> <span class="nf">add_inplace</span><span class="p">(</span><span class="n">X</span><span class="p">,</span> <span class="n">varX</span><span class="p">,</span> <span class="n">Y</span><span class="p">,</span> <span class="n">varY</span><span class="p">):</span> |
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185 | <span class="sd">"""In-place addition with error propagation"""</span> |
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186 | <span class="c"># Z = X + Y</span> |
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187 | <span class="c"># varZ = varX + varY</span> |
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188 | <span class="n">X</span> <span class="o">+=</span> <span class="n">Y</span> |
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189 | <span class="n">varX</span> <span class="o">+=</span> <span class="n">varY</span> |
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190 | <span class="k">return</span> <span class="n">X</span><span class="p">,</span> <span class="n">varX</span> |
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191 | |
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192 | </div> |
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193 | <div class="viewcode-block" id="pow_inplace"><a class="viewcode-back" href="../../../dev/api/sas.data_util.html#sas.data_util.err1d.pow_inplace">[docs]</a><span class="k">def</span> <span class="nf">pow_inplace</span><span class="p">(</span><span class="n">X</span><span class="p">,</span> <span class="n">varX</span><span class="p">,</span> <span class="n">n</span><span class="p">):</span> |
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194 | <span class="sd">"""In-place X**n with error propagation"""</span> |
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195 | <span class="c"># Direct algorithm</span> |
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196 | <span class="c"># Z = X**n</span> |
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197 | <span class="c"># varZ = abs(n) * varX/X**2 * Z**2</span> |
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198 | <span class="c"># Indirect algorithm to minimize intermediates</span> |
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199 | <span class="n">varX</span> <span class="o">/=</span> <span class="n">X</span> |
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200 | <span class="n">varX</span> <span class="o">/=</span> <span class="n">X</span> <span class="c"># varX now has varX/X**2</span> |
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201 | <span class="n">X</span> <span class="o">**=</span> <span class="n">n</span> <span class="c"># X now has Z = X**n</span> |
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202 | <span class="n">varX</span> <span class="o">*=</span> <span class="n">X</span> |
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203 | <span class="n">varX</span> <span class="o">*=</span> <span class="n">X</span> <span class="c"># varX now has varX/X**2 * Z**2</span> |
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204 | <span class="n">varX</span> <span class="o">*=</span> <span class="n">n</span><span class="o">**</span><span class="mi">2</span> <span class="c"># varX now has varZ</span> |
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205 | <span class="k">return</span> <span class="n">X</span><span class="p">,</span> <span class="n">varX</span></div> |
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206 | </pre></div> |
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207 | |
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214 | <h3>Quick search</h3> |
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215 | <form class="search" action="../../../search.html" method="get"> |
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216 | <input type="text" name="q" /> |
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217 | <input type="submit" value="Go" /> |
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218 | <input type="hidden" name="check_keywords" value="yes" /> |
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219 | <input type="hidden" name="area" value="default" /> |
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220 | </form> |
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221 | <p class="searchtip" style="font-size: 90%"> |
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222 | Enter search terms or a module, class or function name. |
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223 | </p> |
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224 | </div> |
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225 | <script type="text/javascript">$('#searchbox').show(0);</script> |
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226 | </div> |
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227 | </div> |
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228 | <div class="clearer"></div> |
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229 | </div> |
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230 | <div class="related"> |
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231 | <h3>Navigation</h3> |
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232 | <ul> |
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233 | <li class="right" style="margin-right: 10px"> |
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234 | <a href="../../../genindex.html" title="General Index" |
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235 | >index</a></li> |
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236 | <li class="right" > |
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237 | <a href="../../../py-modindex.html" title="Python Module Index" |
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238 | >modules</a> |</li> |
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239 | <li><a href="../../../index.html">SasView 3.0.0 documentation</a> »</li> |
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240 | <li><a href="../../index.html" >Module code</a> »</li> |
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241 | </ul> |
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242 | </div> |
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243 | <div class="footer"> |
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244 | © Copyright 2013, The SasView Project. |
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245 | Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.3. |
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246 | </div> |
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247 | </body> |
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248 | </html> |
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