[bee885e] | 1 | |
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[0997158f] | 2 | ##################################################################### |
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| 3 | #This software was developed by the University of Tennessee as part of the |
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| 4 | #Distributed Data Analysis of Neutron Scattering Experiments (DANSE) |
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| 5 | #project funded by the US National Science Foundation. |
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| 6 | #See the license text in license.txt |
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| 7 | #copyright 2008, University of Tennessee |
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| 8 | ###################################################################### |
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[bee885e] | 9 | |
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| 10 | import numpy |
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| 11 | import os |
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| 12 | from DataLoader.data_info import Data1D |
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| 13 | |
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| 14 | # Check whether we have a converter available |
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| 15 | has_converter = True |
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| 16 | try: |
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| 17 | from data_util.nxsunit import Converter |
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| 18 | except: |
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| 19 | has_converter = False |
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| 20 | |
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| 21 | class Reader(object): |
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| 22 | """ |
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[0997158f] | 23 | Class to load HFIR 1D 4-column files |
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[bee885e] | 24 | """ |
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| 25 | ## File type |
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[28caa03] | 26 | type_name = "HFIR 1D" |
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| 27 | ## Wildcards |
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[bee885e] | 28 | type = ["HFIR 1D files (*.d1d)|*.d1d"] |
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| 29 | ## List of allowed extensions |
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| 30 | ext=['.d1d'] |
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| 31 | |
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| 32 | def read(self, path): |
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| 33 | """ |
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[0997158f] | 34 | Load data file |
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| 35 | |
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| 36 | :param path: file path |
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| 37 | |
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| 38 | :return: Data1D object, or None |
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| 39 | |
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| 40 | :raise RuntimeError: when the file can't be opened |
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| 41 | :raise ValueError: when the length of the data vectors are inconsistent |
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[bee885e] | 42 | """ |
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| 43 | if os.path.isfile(path): |
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| 44 | basename = os.path.basename(path) |
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| 45 | root, extension = os.path.splitext(basename) |
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| 46 | if extension.lower() in self.ext: |
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| 47 | try: |
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| 48 | input_f = open(path,'r') |
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| 49 | except : |
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| 50 | raise RuntimeError, "hfir1d_reader: cannot open %s" % path |
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| 51 | buff = input_f.read() |
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| 52 | lines = buff.split('\n') |
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| 53 | x = numpy.zeros(0) |
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| 54 | y = numpy.zeros(0) |
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| 55 | dx = numpy.zeros(0) |
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| 56 | dy = numpy.zeros(0) |
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| 57 | output = Data1D(x, y, dx=dx, dy=dy) |
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| 58 | self.filename = output.filename = basename |
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| 59 | |
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| 60 | data_conv_q = None |
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| 61 | data_conv_i = None |
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| 62 | |
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[ca10d8e] | 63 | if has_converter == True and output.x_unit != '1/A': |
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| 64 | data_conv_q = Converter('1/A') |
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[bee885e] | 65 | # Test it |
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| 66 | data_conv_q(1.0, output.x_unit) |
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| 67 | |
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[ca10d8e] | 68 | if has_converter == True and output.y_unit != '1/cm': |
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| 69 | data_conv_i = Converter('1/cm') |
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[bee885e] | 70 | # Test it |
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| 71 | data_conv_i(1.0, output.y_unit) |
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| 72 | |
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| 73 | for line in lines: |
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| 74 | toks = line.split() |
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| 75 | try: |
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| 76 | _x = float(toks[0]) |
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| 77 | _y = float(toks[1]) |
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| 78 | _dx = float(toks[3]) |
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| 79 | _dy = float(toks[2]) |
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| 80 | |
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| 81 | if data_conv_q is not None: |
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| 82 | _x = data_conv_q(_x, units=output.x_unit) |
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| 83 | _dx = data_conv_q(_dx, units=output.x_unit) |
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| 84 | |
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| 85 | if data_conv_i is not None: |
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| 86 | _y = data_conv_i(_y, units=output.y_unit) |
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| 87 | _dy = data_conv_i(_dy, units=output.y_unit) |
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| 88 | |
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| 89 | |
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| 90 | x = numpy.append(x, _x) |
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| 91 | y = numpy.append(y, _y) |
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| 92 | dx = numpy.append(dx, _dx) |
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| 93 | dy = numpy.append(dy, _dy) |
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| 94 | except: |
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| 95 | # Couldn't parse this line, skip it |
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| 96 | pass |
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| 97 | |
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| 98 | |
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| 99 | # Sanity check |
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| 100 | if not len(y) == len(dy): |
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| 101 | raise RuntimeError, "hfir1d_reader: y and dy have different length" |
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| 102 | if not len(x) == len(dx): |
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| 103 | raise RuntimeError, "hfir1d_reader: x and dx have different length" |
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| 104 | |
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| 105 | # If the data length is zero, consider this as |
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| 106 | # though we were not able to read the file. |
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| 107 | if len(x)==0: |
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| 108 | raise RuntimeError, "hfir1d_reader: could not load file" |
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| 109 | |
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| 110 | output.x = x |
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| 111 | output.y = y |
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| 112 | output.dy = dy |
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| 113 | output.dx = dx |
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| 114 | if data_conv_q is not None: |
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| 115 | output.xaxis("\\rm{Q}", output.x_unit) |
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| 116 | else: |
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| 117 | output.xaxis("\\rm{Q}", 'A^{-1}') |
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| 118 | if data_conv_i is not None: |
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[0e2aa40] | 119 | output.yaxis("\\rm{Intensity}", output.y_unit) |
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[bee885e] | 120 | else: |
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[0e2aa40] | 121 | output.yaxis("\\rm{Intensity}","cm^{-1}") |
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[bee885e] | 122 | |
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[fe78c7b] | 123 | # Store loading process information |
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| 124 | output.meta_data['loader'] = self.type_name |
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[bee885e] | 125 | return output |
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| 126 | else: |
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| 127 | raise RuntimeError, "%s is not a file" % path |
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| 128 | return None |
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| 129 | |
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| 130 | if __name__ == "__main__": |
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| 131 | reader = Reader() |
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| 132 | print reader.read("../test/S2-30dq.d1d") |
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| 133 | |
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| 134 | |
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| 135 | |
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