source: sasmodels/sasmodels/models/broad_peak.py @ 7f47777

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Last change on this file since 7f47777 was dcdf29d, checked in by piotr, 8 years ago

pylint cleanup

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[636adb6]1r"""
2This model calculates an empirical functional form for SAS data characterized
3by a broad scattering peak. Many SAS spectra are characterized by a broad peak
4even though they are from amorphous soft materials. For example, soft systems
5that show a SAS peak include copolymers, polyelectrolytes, multiphase systems,
6layered structures, etc.
7
[3c56da87]8The d-spacing corresponding to the broad peak is a characteristic distance
9between the scattering inhomogeneities (such as in lamellar, cylindrical, or
[636adb6]10spherical morphologies, or for bicontinuous structures).
11
12Definition
13----------
14
[eb69cce]15The scattering intensity $I(q)$ is calculated as
[636adb6]16
[eb69cce]17.. math::
[f57d123]18
[eb69cce]19    I(q) = \frac{A}{q^n} + \frac{C}{1 + (q\xi)^m} + B
[636adb6]20
[eb69cce]21Here the peak position is related to the d-spacing as $q_o = 2\pi / d_o$.
[636adb6]22
[eb69cce]23For 2D data the scattering intensity is calculated in the same way as 1D,
24where the $q$ vector is defined as
[636adb6]25
[eb69cce]26.. math::
[f57d123]27
28    q = \sqrt{q_x^2 + q_y^2}
[636adb6]29
30
[d138d43]31.. figure:: img/broad_peak_1d.jpg
[636adb6]32
[d138d43]33    1D plot using the default values (w/200 data point).
[636adb6]34
[eb69cce]35References
36----------
[636adb6]37
38None.
39
40*2013/09/09 - Description reviewed by King, S and Parker, P.*
41
42"""
43
[3c56da87]44from numpy import inf, sqrt
[636adb6]45
46name = "broad_peak"
47title = "Broad Lorentzian type peak on top of a power law decay"
48description = """\
49      I(q) = scale_p/pow(q,exponent)+scale_l/
50      (1.0 + pow((fabs(q-q_peak)*length_l),exponent_l) )+ background
51
52      List of default parameters:
53      porod_scale = Porod term scaling
54      porod_exp = Porod exponent
55      lorentz_scale = Lorentzian term scaling
56      lorentz_length = Lorentzian screening length [A]
57      peak_pos = peak location [1/A]
58      lorentz_exp = Lorentzian exponent
59      background = Incoherent background"""
[485aee2]60category = "shape-independent"
[636adb6]61
[dcdf29d]62# pylint: disable=bad-whitespace, line-too-long
[485aee2]63#             ["name", "units", default, [lower, upper], "type", "description"],
[dcdf29d]64parameters = [["porod_scale",    "",  1.0e-05, [-inf, inf], "", "Power law scale factor"],
65              ["porod_exp",      "",      3.0, [-inf, inf], "", "Exponent of power law"],
66              ["lorentz_scale",  "",     10.0, [-inf, inf], "", "Scale factor for broad Lorentzian peak"],
67              ["lorentz_length", "Ang",  50.0, [-inf, inf], "", "Lorentzian screening length"],
68              ["peak_pos",       "1/Ang", 0.1, [-inf, inf], "", "Peak position in q"],
69              ["lorentz_exp",    "",      2.0, [-inf, inf], "", "Exponent of Lorentz function"],
[485aee2]70             ]
[dcdf29d]71# pylint: enable=bad-whitespace, line-too-long
72
73def Iq(q,
74       porod_scale=1.0e-5,
75       porod_exp=3.0,
76       lorentz_scale=10.0,
77       lorentz_length=50.0,
78       peak_pos=0.1,
79       lorentz_exp=2.0):
80    """
81    :param q:              Input q-value
82    :param porod_scale:    Power law scale factor
83    :param porod_exp:      Exponent of power law
84    :param lorentz_scale:  Scale factor for broad Lorentzian peak
85    :param lorentz_length: Lorentzian screening length
86    :param peak_pos:       Peak position in q
87    :param lorentz_exp:    Exponent of Lorentz function
88    :return:               Calculated intensity
89    """
[636adb6]90
[485aee2]91    inten = (porod_scale / q ** porod_exp + lorentz_scale
92             / (1.0 + (abs(q - peak_pos) * lorentz_length) ** lorentz_exp))
[3c56da87]93    return inten
[eb69cce]94Iq.vectorized = True  # Iq accepts an array of q values
[636adb6]95
[f734e7d]96def Iqxy(qx, qy, *args):
[dcdf29d]97    """
98    :param qx:   Input q_x-value
99    :param qy:   Input q_y-value
100    :param args: Remaining arguments
101    :return:     2D-Intensity
102    """
[485aee2]103    return Iq(sqrt(qx ** 2 + qy ** 2), *args)
[636adb6]104
[dcdf29d]105Iqxy.vectorized = True # Iqxy accepts an array of qx, qy values
[636adb6]106
[485aee2]107demo = dict(scale=1, background=0,
108            porod_scale=1.0e-05, porod_exp=3,
109            lorentz_scale=10, lorentz_length=50, peak_pos=0.1, lorentz_exp=2)
[3c56da87]110
[636adb6]111oldname = "BroadPeakModel"
[3c56da87]112oldpars = dict(porod_scale='scale_p', porod_exp='exponent_p',
[485aee2]113               lorentz_scale='scale_l', lorentz_length='length_l', peak_pos='q_peak',
114               lorentz_exp='exponent_l', scale=None)
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