[92da231] | 1 | r""" |
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[eafc9fa] | 2 | DLL driver for C kernels |
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[750ffa5] | 3 | |
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| 4 | The global attribute *ALLOW_SINGLE_PRECISION_DLLS* should be set to *True* if |
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| 5 | you wish to allow single precision floating point evaluation for the compiled |
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| 6 | models, otherwise it defaults to *False*. |
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[92da231] | 7 | |
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| 8 | The compiler command line is stored in the attribute *COMPILE*, with string |
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| 9 | substitutions for %(source)s and %(output)s indicating what to compile and |
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| 10 | where to store it. The actual command is system dependent. |
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| 11 | |
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| 12 | On windows systems, you have a choice of compilers. *MinGW* is the GNU |
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| 13 | compiler toolchain, available in packages such as anaconda and PythonXY, |
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| 14 | or available stand alone. This toolchain has had difficulties on some |
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| 15 | systems, and may or may not work for you. In order to build DLLs, *gcc* |
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| 16 | must be on your path. If the environment variable *SAS_OPENMP* is given |
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| 17 | then -fopenmp is added to the compiler flags. This requires a version |
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| 18 | of MinGW compiled with OpenMP support. |
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| 19 | |
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| 20 | An alternative toolchain uses the Microsoft Visual C++ compiler, available |
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| 21 | free from microsoft: |
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| 22 | |
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[d138d43] | 23 | `<http://www.microsoft.com/en-us/download/details.aspx?id=44266>`_ |
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[92da231] | 24 | |
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| 25 | Again, this requires that the compiler is available on your path. This is |
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| 26 | done by running vcvarsall.bat in a windows terminal. Install locations are |
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| 27 | system dependent, such as: |
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| 28 | |
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| 29 | C:\Program Files (x86)\Common Files\Microsoft\Visual C++ for Python\9.0\vcvarsall.bat |
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| 30 | |
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| 31 | or maybe |
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| 32 | |
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| 33 | C:\Users\yourname\AppData\Local\Programs\Common\Microsoft\Visual C++ for Python\9.0\vcvarsall.bat |
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| 34 | |
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| 35 | And again, the environment variable *SAS_OPENMP* controls whether OpenMP is |
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| 36 | used to compile the C code. This requires the Microsoft vcomp90.dll library, |
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| 37 | which doesn't seem to be included with the compiler, nor does there appear |
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| 38 | to be a public download location. There may be one on your machine already |
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| 39 | in a location such as: |
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| 40 | |
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| 41 | C:\Windows\winsxs\x86_microsoft.vc90.openmp*\vcomp90.dll |
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| 42 | |
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| 43 | If you copy this onto your path, such as the python directory or the install |
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| 44 | directory for this application, then OpenMP should be supported. |
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[14de349] | 45 | """ |
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[eafc9fa] | 46 | from __future__ import print_function |
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[750ffa5] | 47 | |
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[5d4777d] | 48 | import sys |
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| 49 | import os |
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[5a91c6b] | 50 | from os.path import join as joinpath, split as splitpath, splitext |
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[df4dc86] | 51 | import tempfile |
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[14de349] | 52 | import ctypes as ct |
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[5edfe12] | 53 | from ctypes import c_void_p, c_int, c_longdouble, c_double, c_float |
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[14de349] | 54 | |
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| 55 | import numpy as np |
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| 56 | |
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[cb6ecf4] | 57 | from . import generate |
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[f734e7d] | 58 | from .kernelpy import PyInput, PyModel |
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[2c801fe] | 59 | from .exception import annotate_exception |
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[14de349] | 60 | |
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[5d4777d] | 61 | # Compiler platform details |
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| 62 | if sys.platform == 'darwin': |
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[216a9e1] | 63 | #COMPILE = "gcc-mp-4.7 -shared -fPIC -std=c99 -fopenmp -O2 -Wall %s -o %s -lm -lgomp" |
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[df4dc86] | 64 | COMPILE = "gcc -shared -fPIC -std=c99 -O2 -Wall %(source)s -o %(output)s -lm" |
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[5d4777d] | 65 | elif os.name == 'nt': |
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[3c56da87] | 66 | # call vcvarsall.bat before compiling to set path, headers, libs, etc. |
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[68d3c1b] | 67 | if "VCINSTALLDIR" in os.environ: |
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[a30cdd5] | 68 | # MSVC compiler is available, so use it. OpenMP requires a copy of |
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| 69 | # vcomp90.dll on the path. One may be found here: |
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| 70 | # C:/Windows/winsxs/x86_microsoft.vc90.openmp*/vcomp90.dll |
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| 71 | # Copy this to the python directory and uncomment the OpenMP COMPILE |
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[f734e7d] | 72 | # TODO: remove intermediate OBJ file created in the directory |
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| 73 | # TODO: maybe don't use randomized name for the c file |
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[a30cdd5] | 74 | CC = "cl /nologo /Ox /MD /W3 /GS- /DNDEBUG /Tp%(source)s " |
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| 75 | LN = "/link /DLL /INCREMENTAL:NO /MANIFEST /OUT:%(output)s" |
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| 76 | if "SAS_OPENMP" in os.environ: |
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| 77 | COMPILE = " ".join((CC, "/openmp", LN)) |
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| 78 | else: |
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| 79 | COMPILE = " ".join((CC, LN)) |
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[5a91c6b] | 80 | elif True: |
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| 81 | # If MSVC compiler is not available, try using mingw |
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[fb69211] | 82 | # fPIC is not needed on windows |
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[e1454ab] | 83 | COMPILE = "gcc -shared -std=c99 -O2 -Wall %(source)s -o %(output)s -lm" |
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[a30cdd5] | 84 | if "SAS_OPENMP" in os.environ: |
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| 85 | COMPILE = COMPILE + " -fopenmp" |
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[fb69211] | 86 | else: |
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[5a91c6b] | 87 | # If MSVC compiler is not available, try using tinycc |
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[fb69211] | 88 | from tinycc import TCC |
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| 89 | COMPILE = TCC + " -shared -rdynamic -Wall %(source)s -o %(output)s" |
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[5d4777d] | 90 | else: |
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[a30cdd5] | 91 | COMPILE = "cc -shared -fPIC -fopenmp -std=c99 -O2 -Wall %(source)s -o %(output)s -lm" |
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[df4dc86] | 92 | |
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[ff97458] | 93 | # Windows-specific solution |
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| 94 | if os.name == 'nt': |
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[3ecf034] | 95 | # Assume the default location of module DLLs is in .sasmodels/compiled_models. |
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| 96 | DLL_PATH = os.path.join(os.path.expanduser("~"), ".sasmodels", "compiled_models") |
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| 97 | if not os.path.exists(DLL_PATH): |
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| 98 | os.makedirs(DLL_PATH) |
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[ff97458] | 99 | else: |
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| 100 | # Set up the default path for compiled modules. |
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| 101 | DLL_PATH = tempfile.gettempdir() |
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[5d4777d] | 102 | |
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[5d316e9] | 103 | ALLOW_SINGLE_PRECISION_DLLS = True |
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[5d4777d] | 104 | |
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[750ffa5] | 105 | |
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[17bbadd] | 106 | def dll_path(model_info, dtype="double"): |
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[5d4777d] | 107 | """ |
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[17bbadd] | 108 | Path to the compiled model defined by *model_info*. |
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[5d4777d] | 109 | """ |
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[17bbadd] | 110 | basename = splitext(splitpath(model_info['filename'])[1])[0] |
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[750ffa5] | 111 | if np.dtype(dtype) == generate.F32: |
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| 112 | basename += "32" |
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[5edfe12] | 113 | elif np.dtype(dtype) == generate.F64: |
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| 114 | basename += "64" |
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| 115 | else: |
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| 116 | basename += "128" |
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[01b8659] | 117 | |
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| 118 | # Hack to find precompiled dlls |
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| 119 | path = joinpath(generate.DATA_PATH, '..', 'compiled_models', basename+'.so') |
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| 120 | if os.path.exists(path): |
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| 121 | return path |
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| 122 | |
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[5d4777d] | 123 | return joinpath(DLL_PATH, basename+'.so') |
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| 124 | |
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[17bbadd] | 125 | def make_dll(source, model_info, dtype="double"): |
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[5d4777d] | 126 | """ |
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| 127 | Load the compiled model defined by *kernel_module*. |
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| 128 | |
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| 129 | Recompile if any files are newer than the model file. |
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| 130 | |
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[aa4946b] | 131 | *dtype* is a numpy floating point precision specifier indicating whether |
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| 132 | the model should be single or double precision. The default is double |
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| 133 | precision. |
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[5d4777d] | 134 | |
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[aa4946b] | 135 | The DLL is not loaded until the kernel is called so models can |
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[5d4777d] | 136 | be defined without using too many resources. |
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[aa4946b] | 137 | |
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| 138 | Set *sasmodels.kerneldll.DLL_PATH* to the compiled dll output path. |
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| 139 | The default is the system temporary directory. |
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| 140 | |
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| 141 | Set *sasmodels.ALLOW_SINGLE_PRECISION_DLLS* to True if single precision |
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| 142 | models are allowed as DLLs. |
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[5d4777d] | 143 | """ |
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[17bbadd] | 144 | if callable(model_info.get('Iq', None)): |
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| 145 | return PyModel(model_info) |
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[6ad0e87] | 146 | |
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[750ffa5] | 147 | dtype = np.dtype(dtype) |
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[5d316e9] | 148 | if dtype == generate.F16: |
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| 149 | raise ValueError("16 bit floats not supported") |
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[5edfe12] | 150 | if dtype == generate.F32 and not ALLOW_SINGLE_PRECISION_DLLS: |
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| 151 | dtype = generate.F64 # Force 64-bit dll |
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[750ffa5] | 152 | |
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| 153 | if dtype == generate.F32: # 32-bit dll |
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[17bbadd] | 154 | tempfile_prefix = 'sas_' + model_info['name'] + '32_' |
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[5edfe12] | 155 | elif dtype == generate.F64: |
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[17bbadd] | 156 | tempfile_prefix = 'sas_' + model_info['name'] + '64_' |
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[750ffa5] | 157 | else: |
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[17bbadd] | 158 | tempfile_prefix = 'sas_' + model_info['name'] + '128_' |
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[01b8659] | 159 | |
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[17bbadd] | 160 | dll = dll_path(model_info, dtype) |
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[e1454ab] | 161 | |
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| 162 | if not os.path.exists(dll): |
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[5a91c6b] | 163 | need_recompile = True |
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[31bc9bf] | 164 | elif getattr(sys, 'frozen', None) is not None: |
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[5a91c6b] | 165 | # TODO: don't suppress time stamp |
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| 166 | # Currently suppressing recompile when running in a frozen environment |
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| 167 | need_recompile = False |
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| 168 | else: |
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| 169 | dll_time = os.path.getmtime(dll) |
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| 170 | source_files = generate.model_sources(model_info) + [model_info['filename']] |
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| 171 | newest_source = max(os.path.getmtime(f) for f in source_files) |
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| 172 | need_recompile = dll_time < newest_source |
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| 173 | if need_recompile: |
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[823e620] | 174 | fid, filename = tempfile.mkstemp(suffix=".c", prefix=tempfile_prefix) |
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[5a91c6b] | 175 | source = generate.convert_type(source, dtype) |
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[823e620] | 176 | os.fdopen(fid, "w").write(source) |
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[aa4946b] | 177 | command = COMPILE%{"source":filename, "output":dll} |
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[df4dc86] | 178 | status = os.system(command) |
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[aa4946b] | 179 | if status != 0 or not os.path.exists(dll): |
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[f734e7d] | 180 | raise RuntimeError("compile failed. File is in %r"%filename) |
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[5d4777d] | 181 | else: |
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[74667d3] | 182 | ## comment the following to keep the generated c file |
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| 183 | os.unlink(filename) |
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| 184 | #print("saving compiled file in %r"%filename) |
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[aa4946b] | 185 | return dll |
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| 186 | |
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| 187 | |
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[17bbadd] | 188 | def load_dll(source, model_info, dtype="double"): |
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[aa4946b] | 189 | """ |
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[823e620] | 190 | Create and load a dll corresponding to the source, info pair returned |
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[aa4946b] | 191 | from :func:`sasmodels.generate.make` compiled for the target precision. |
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| 192 | |
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| 193 | See :func:`make_dll` for details on controlling the dll path and the |
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| 194 | allowed floating point precision. |
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| 195 | """ |
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[17bbadd] | 196 | filename = make_dll(source, model_info, dtype=dtype) |
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| 197 | return DllModel(filename, model_info, dtype=dtype) |
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[5d4777d] | 198 | |
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[14de349] | 199 | |
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[f734e7d] | 200 | IQ_ARGS = [c_void_p, c_void_p, c_int] |
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| 201 | IQXY_ARGS = [c_void_p, c_void_p, c_void_p, c_int] |
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[14de349] | 202 | |
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| 203 | class DllModel(object): |
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| 204 | """ |
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| 205 | ctypes wrapper for a single model. |
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| 206 | |
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[17bbadd] | 207 | *source* and *model_info* are the model source and interface as returned |
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[14de349] | 208 | from :func:`gen.make`. |
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| 209 | |
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| 210 | *dtype* is the desired model precision. Any numpy dtype for single |
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| 211 | or double precision floats will do, such as 'f', 'float32' or 'single' |
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| 212 | for single and 'd', 'float64' or 'double' for double. Double precision |
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| 213 | is an optional extension which may not be available on all devices. |
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[ff7119b] | 214 | |
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| 215 | Call :meth:`release` when done with the kernel. |
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[14de349] | 216 | """ |
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[6ad0e87] | 217 | |
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[17bbadd] | 218 | def __init__(self, dllpath, model_info, dtype=generate.F32): |
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| 219 | self.info = model_info |
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[ce27e21] | 220 | self.dllpath = dllpath |
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| 221 | self.dll = None |
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[750ffa5] | 222 | self.dtype = np.dtype(dtype) |
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[14de349] | 223 | |
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[ce27e21] | 224 | def _load_dll(self): |
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| 225 | Nfixed1d = len(self.info['partype']['fixed-1d']) |
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| 226 | Nfixed2d = len(self.info['partype']['fixed-2d']) |
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| 227 | Npd1d = len(self.info['partype']['pd-1d']) |
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| 228 | Npd2d = len(self.info['partype']['pd-2d']) |
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[14de349] | 229 | |
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[823e620] | 230 | #print("dll", self.dllpath) |
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[2c801fe] | 231 | try: |
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| 232 | self.dll = ct.CDLL(self.dllpath) |
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[4d76711] | 233 | except: |
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| 234 | annotate_exception("while loading "+self.dllpath) |
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[2c801fe] | 235 | raise |
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[14de349] | 236 | |
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[5edfe12] | 237 | fp = (c_float if self.dtype == generate.F32 |
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| 238 | else c_double if self.dtype == generate.F64 |
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| 239 | else c_longdouble) |
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[750ffa5] | 240 | pd_args_1d = [c_void_p, fp] + [c_int]*Npd1d if Npd1d else [] |
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[823e620] | 241 | pd_args_2d = [c_void_p, fp] + [c_int]*Npd2d if Npd2d else [] |
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[cb6ecf4] | 242 | self.Iq = self.dll[generate.kernel_name(self.info, False)] |
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[750ffa5] | 243 | self.Iq.argtypes = IQ_ARGS + pd_args_1d + [fp]*Nfixed1d |
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[ce27e21] | 244 | |
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[cb6ecf4] | 245 | self.Iqxy = self.dll[generate.kernel_name(self.info, True)] |
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[750ffa5] | 246 | self.Iqxy.argtypes = IQXY_ARGS + pd_args_2d + [fp]*Nfixed2d |
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[6ad0e87] | 247 | |
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| 248 | self.release() |
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[ce27e21] | 249 | |
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| 250 | def __getstate__(self): |
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[eafc9fa] | 251 | return self.info, self.dllpath |
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[ce27e21] | 252 | |
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| 253 | def __setstate__(self, state): |
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[eafc9fa] | 254 | self.info, self.dllpath = state |
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| 255 | self.dll = None |
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[ce27e21] | 256 | |
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[4d76711] | 257 | def make_kernel(self, q_vectors): |
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[eafc9fa] | 258 | q_input = PyInput(q_vectors, self.dtype) |
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[b3f6bc3] | 259 | if self.dll is None: self._load_dll() |
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[eafc9fa] | 260 | kernel = self.Iqxy if q_input.is_2d else self.Iq |
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[3c56da87] | 261 | return DllKernel(kernel, self.info, q_input) |
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[4d76711] | 262 | |
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[eafc9fa] | 263 | def release(self): |
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[14de349] | 264 | """ |
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[eafc9fa] | 265 | Release any resources associated with the model. |
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[14de349] | 266 | """ |
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[6ad0e87] | 267 | if os.name == 'nt': |
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| 268 | #dll = ct.cdll.LoadLibrary(self.dllpath) |
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| 269 | dll = ct.CDLL(self.dllpath) |
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| 270 | libHandle = dll._handle |
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| 271 | #libHandle = ct.c_void_p(dll._handle) |
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| 272 | del dll, self.dll |
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| 273 | self.dll = None |
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| 274 | ct.windll.kernel32.FreeLibrary(libHandle) |
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| 275 | else: |
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| 276 | pass |
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[ff7119b] | 277 | |
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[14de349] | 278 | |
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| 279 | class DllKernel(object): |
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[ff7119b] | 280 | """ |
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| 281 | Callable SAS kernel. |
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| 282 | |
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[b3f6bc3] | 283 | *kernel* is the c function to call. |
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[ff7119b] | 284 | |
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[17bbadd] | 285 | *model_info* is the module information |
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[ff7119b] | 286 | |
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[3c56da87] | 287 | *q_input* is the DllInput q vectors at which the kernel should be |
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[ff7119b] | 288 | evaluated. |
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| 289 | |
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| 290 | The resulting call method takes the *pars*, a list of values for |
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[823e620] | 291 | the fixed parameters to the kernel, and *pd_pars*, a list of (value, weight) |
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[ff7119b] | 292 | vectors for the polydisperse parameters. *cutoff* determines the |
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| 293 | integration limits: any points with combined weight less than *cutoff* |
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| 294 | will not be calculated. |
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| 295 | |
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| 296 | Call :meth:`release` when done with the kernel instance. |
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| 297 | """ |
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[17bbadd] | 298 | def __init__(self, kernel, model_info, q_input): |
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| 299 | self.info = model_info |
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[3c56da87] | 300 | self.q_input = q_input |
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[14de349] | 301 | self.kernel = kernel |
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[3c56da87] | 302 | self.res = np.empty(q_input.nq, q_input.dtype) |
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[eafc9fa] | 303 | dim = '2d' if q_input.is_2d else '1d' |
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[17bbadd] | 304 | self.fixed_pars = model_info['partype']['fixed-' + dim] |
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| 305 | self.pd_pars = model_info['partype']['pd-' + dim] |
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[14de349] | 306 | |
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[ce27e21] | 307 | # In dll kernel, but not in opencl kernel |
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| 308 | self.p_res = self.res.ctypes.data |
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[14de349] | 309 | |
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[f734e7d] | 310 | def __call__(self, fixed_pars, pd_pars, cutoff): |
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[5edfe12] | 311 | real = (np.float32 if self.q_input.dtype == generate.F32 |
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| 312 | else np.float64 if self.q_input.dtype == generate.F64 |
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| 313 | else np.float128) |
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[14de349] | 314 | |
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[3c56da87] | 315 | nq = c_int(self.q_input.nq) |
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[f734e7d] | 316 | if pd_pars: |
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| 317 | cutoff = real(cutoff) |
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| 318 | loops_N = [np.uint32(len(p[0])) for p in pd_pars] |
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| 319 | loops = np.hstack(pd_pars) |
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[3c56da87] | 320 | loops = np.ascontiguousarray(loops.T, self.q_input.dtype).flatten() |
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[f734e7d] | 321 | p_loops = loops.ctypes.data |
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| 322 | dispersed = [p_loops, cutoff] + loops_N |
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| 323 | else: |
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| 324 | dispersed = [] |
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| 325 | fixed = [real(p) for p in fixed_pars] |
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[3c56da87] | 326 | args = self.q_input.q_pointers + [self.p_res, nq] + dispersed + fixed |
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[9404dd3] | 327 | #print(pars) |
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[ce27e21] | 328 | self.kernel(*args) |
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[14de349] | 329 | |
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| 330 | return self.res |
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| 331 | |
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| 332 | def release(self): |
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[eafc9fa] | 333 | """ |
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| 334 | Release any resources associated with the kernel. |
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| 335 | """ |
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[14de349] | 336 | pass |
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