Index: calculator/docs/sphinx/_build/html/_sources/api/index.txt
===================================================================
--- calculator/docs/sphinx/_build/html/_sources/api/index.txt	(revision beb374ad8ee7461446b698ccc9fb44b263652b04)
+++ calculator/docs/sphinx/_build/html/_sources/api/index.txt	(revision 14e9eb3f64b47cc4e72059d8978db96ae2d6d59a)
@@ -15,2 +15,3 @@
 
    sld_calculator.rst
+   slit_length_calculator.rst
Index: calculator/docs/sphinx/_build/html/_sources/api/slit_length_calculator.txt
===================================================================
--- calculator/docs/sphinx/_build/html/_sources/api/slit_length_calculator.txt	(revision 14e9eb3f64b47cc4e72059d8978db96ae2d6d59a)
+++ calculator/docs/sphinx/_build/html/_sources/api/slit_length_calculator.txt	(revision 14e9eb3f64b47cc4e72059d8978db96ae2d6d59a)
@@ -0,0 +1,15 @@
+.. Autogenerated by genmods.py
+
+******************************************************************************
+Slit Length Calculator
+******************************************************************************
+
+:mod:`sans.calculator.slit_length_calculator`
+==============================================================================
+
+.. automodule:: sans.calculator.slit_length_calculator
+   :members:
+   :undoc-members:
+   :inherited-members:
+   :show-inheritance:
+
Index: calculator/docs/sphinx/_build/html/api/index.html
===================================================================
--- calculator/docs/sphinx/_build/html/api/index.html	(revision beb374ad8ee7461446b698ccc9fb44b263652b04)
+++ calculator/docs/sphinx/_build/html/api/index.html	(revision 14e9eb3f64b47cc4e72059d8978db96ae2d6d59a)
@@ -60,5 +60,5 @@
 <tr class="field"><th class="field-name">Release:</th><td class="field-body">0.1</td>
 </tr>
-<tr class="field"><th class="field-name">Date:</th><td class="field-body">May 27, 2010</td>
+<tr class="field"><th class="field-name">Date:</th><td class="field-body">May 28, 2010</td>
 </tr>
 </tbody>
@@ -68,4 +68,8 @@
 <li class="toctree-l1"><a class="reference internal" href="sld_calculator.html">Sld Calculator</a><ul>
 <li class="toctree-l2"><a class="reference internal" href="sld_calculator.html#module-sans.calculator.sld_calculator"><tt class="docutils literal"><span class="pre">sans.calculator.sld_calculator</span></tt></a></li>
+</ul>
+</li>
+<li class="toctree-l1"><a class="reference internal" href="slit_length_calculator.html">Slit Length Calculator</a><ul>
+<li class="toctree-l2"><a class="reference internal" href="slit_length_calculator.html#module-sans.calculator.slit_length_calculator"><tt class="docutils literal"><span class="pre">sans.calculator.slit_length_calculator</span></tt></a></li>
 </ul>
 </li>
Index: calculator/docs/sphinx/_build/html/api/sld_calculator.html
===================================================================
--- calculator/docs/sphinx/_build/html/api/sld_calculator.html	(revision beb374ad8ee7461446b698ccc9fb44b263652b04)
+++ calculator/docs/sphinx/_build/html/api/sld_calculator.html	(revision 14e9eb3f64b47cc4e72059d8978db96ae2d6d59a)
@@ -25,4 +25,5 @@
     <link rel="top" title="calculator v0.1.0 documentation" href="../index.html" />
     <link rel="up" title="Reference" href="index.html" />
+    <link rel="next" title="Slit Length Calculator" href="slit_length_calculator.html" />
     <link rel="prev" title="Reference" href="index.html" /> 
   </head>
@@ -37,4 +38,7 @@
           <a href="../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
+        <li class="right" >
+          <a href="slit_length_calculator.html" title="Slit Length Calculator"
+             accesskey="N">next</a> |</li>
         <li class="right" >
           <a href="index.html" title="Reference"
@@ -54,16 +58,26 @@
 <div class="section" id="module-sans.calculator.sld_calculator">
 <span id="sans-calculator-sld-calculator"></span><h2><a class="reference internal" href="#module-sans.calculator.sld_calculator"><tt class="xref py py-mod docutils literal"><span class="pre">sans.calculator.sld_calculator</span></tt></a><a class="headerlink" href="#module-sans.calculator.sld_calculator" title="Permalink to this headline">Â¶</a></h2>
-<p>This module intends to compute the neutron scattering length density of molecule
-&#64;author: Gervaise B. Alina</p>
+<p>This module intends to compute the neutron scattering length density 
+of a molecule.It uses methods of the periodictable package to provide 
+easy user interface for  Sld calculator applications.</p>
 <dl class="class">
 <dt id="sans.calculator.sld_calculator.SldCalculator">
 <em class="property">class </em><tt class="descclassname">sans.calculator.sld_calculator.</tt><tt class="descname">SldCalculator</tt><a class="headerlink" href="#sans.calculator.sld_calculator.SldCalculator" title="Permalink to this definition">Â¶</a></dt>
 <dd><p>Bases: <tt class="xref py py-class docutils literal"><span class="pre">object</span></tt></p>
-<p>compute neutron SLD and related parameters</p>
-<dl class="method">
-<dt id="sans.calculator.sld_calculator.SldCalculator.calculate_coherence_im">
-<tt class="descname">calculate_coherence_im</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.calculator.sld_calculator.SldCalculator.calculate_coherence_im" title="Permalink to this definition">Â¶</a></dt>
-<dd>Compute imaginary part of the absorption</dd></dl>
-
+<p>Given a molecule, a density and a wavelength, this class 
+determine scattering length density.</p>
+<p>Example: To get the sld value and the length 1/e the following 
+methods need to be called in this later order:</p>
+<div class="highlight-python"><pre>formula = "H2O"
+density = 1.0
+wavelength = 6.0
+sld_calculator = SldCalculator()
+sld_calculator.set_value(formula, density, wavelength) 
+sld_real, sld_im, _ = sld_calculator.calculate_neutron_sld()
+result : sld = sld_real +i sld_im</pre>
+</div>
+<p>Note: <strong>set_value()</strong> and <strong>calculate_neutron_sld()</strong> methods must
+be called in this order prior calling <strong>calculate_length()</strong> to get 
+the proper result.</p>
 <dl class="method">
 <dt id="sans.calculator.sld_calculator.SldCalculator.calculate_length">
@@ -75,6 +89,6 @@
 <tt class="descname">calculate_neutron_sld</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.calculator.sld_calculator.SldCalculator.calculate_neutron_sld" title="Permalink to this definition">Â¶</a></dt>
 <dd>Compute the neutron SLD for a given molecule
-&#64;return absorp: absorption
-&#64;return coh: coherence cross section
+&#64;return sld_real : real part of the sld value
+&#64;return sld_im: imaginary part of the sld value
 &#64;return inc: incoherence cross section</dd></dl>
 
@@ -87,7 +101,7 @@
 <dl class="method">
 <dt id="sans.calculator.sld_calculator.SldCalculator.set_value">
-<tt class="descname">set_value</tt><big>(</big><em>user_formula</em>, <em>density</em>, <em>wavelength=6.0</em><big>)</big><a class="headerlink" href="#sans.calculator.sld_calculator.SldCalculator.set_value" title="Permalink to this definition">Â¶</a></dt>
-<dd>Store values of density and wavelength into the calculator 
-and compute the volume</dd></dl>
+<tt class="descname">set_value</tt><big>(</big><em>formula</em>, <em>density</em>, <em>wavelength=6.0</em><big>)</big><a class="headerlink" href="#sans.calculator.sld_calculator.SldCalculator.set_value" title="Permalink to this definition">Â¶</a></dt>
+<dd>Store values into the sld calculator and compute the corresponding
+volume.</dd></dl>
 
 </dd></dl>
@@ -113,4 +127,7 @@
   <p class="topless"><a href="index.html"
                         title="previous chapter">Reference</a></p>
+  <h4>Next topic</h4>
+  <p class="topless"><a href="slit_length_calculator.html"
+                        title="next chapter">Slit Length Calculator</a></p>
   <h3>This Page</h3>
   <ul class="this-page-menu">
@@ -145,4 +162,7 @@
              >modules</a> |</li>
         <li class="right" >
+          <a href="slit_length_calculator.html" title="Slit Length Calculator"
+             >next</a> |</li>
+        <li class="right" >
           <a href="index.html" title="Reference"
              >previous</a> |</li>
Index: calculator/docs/sphinx/_build/html/api/slit_length_calculator.html
===================================================================
--- calculator/docs/sphinx/_build/html/api/slit_length_calculator.html	(revision 14e9eb3f64b47cc4e72059d8978db96ae2d6d59a)
+++ calculator/docs/sphinx/_build/html/api/slit_length_calculator.html	(revision 14e9eb3f64b47cc4e72059d8978db96ae2d6d59a)
@@ -0,0 +1,145 @@
+
+
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
+  "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
+<html xmlns="http://www.w3.org/1999/xhtml">
+  <head>
+    <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+    
+    <title>Slit Length Calculator &mdash; calculator v0.1.0 documentation</title>
+    <link rel="stylesheet" href="../_static/default.css" type="text/css" />
+    <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
+    <script type="text/javascript">
+      var DOCUMENTATION_OPTIONS = {
+        URL_ROOT:    '../',
+        VERSION:     '0.1.0',
+        COLLAPSE_INDEX: false,
+        FILE_SUFFIX: '.html',
+        HAS_SOURCE:  true
+      };
+    </script>
+    <script type="text/javascript" src="../_static/jquery.js"></script>
+    <script type="text/javascript" src="../_static/underscore.js"></script>
+    <script type="text/javascript" src="../_static/doctools.js"></script>
+    <link rel="top" title="calculator v0.1.0 documentation" href="../index.html" />
+    <link rel="up" title="Reference" href="index.html" />
+    <link rel="prev" title="Sld Calculator" href="sld_calculator.html" /> 
+  </head>
+  <body>
+    <div class="related">
+      <h3>Navigation</h3>
+      <ul>
+        <li class="right" style="margin-right: 10px">
+          <a href="../genindex.html" title="General Index"
+             accesskey="I">index</a></li>
+        <li class="right" >
+          <a href="../py-modindex.html" title="Python Module Index"
+             >modules</a> |</li>
+        <li class="right" >
+          <a href="sld_calculator.html" title="Sld Calculator"
+             accesskey="P">previous</a> |</li>
+        <li><a href="../index.html">calculator v0.1.0 documentation</a> &raquo;</li>
+          <li><a href="index.html" accesskey="U">Reference</a> &raquo;</li> 
+      </ul>
+    </div>  
+
+    <div class="document">
+      <div class="documentwrapper">
+        <div class="bodywrapper">
+          <div class="body">
+            
+  <div class="section" id="slit-length-calculator">
+<h1>Slit Length Calculator<a class="headerlink" href="#slit-length-calculator" title="Permalink to this headline">Â¶</a></h1>
+<div class="section" id="module-sans.calculator.slit_length_calculator">
+<span id="sans-calculator-slit-length-calculator"></span><h2><a class="reference internal" href="#module-sans.calculator.slit_length_calculator"><tt class="xref py py-mod docutils literal"><span class="pre">sans.calculator.slit_length_calculator</span></tt></a><a class="headerlink" href="#module-sans.calculator.slit_length_calculator" title="Permalink to this headline">Â¶</a></h2>
+<p>This module is a small tool to allow user to quickly
+determine the slit length value of data.</p>
+<dl class="class">
+<dt id="sans.calculator.slit_length_calculator.SlitlengthCalculator">
+<em class="property">class </em><tt class="descclassname">sans.calculator.slit_length_calculator.</tt><tt class="descname">SlitlengthCalculator</tt><a class="headerlink" href="#sans.calculator.slit_length_calculator.SlitlengthCalculator" title="Permalink to this definition">Â¶</a></dt>
+<dd><p>Bases: <tt class="xref py py-class docutils literal"><span class="pre">object</span></tt></p>
+<p>compute slit length from SAXSess beam profile (1st col. Q , 2nd col. I ,
+and 3rd col. dI.: don&#8217;t need the 3rd)</p>
+<dl class="method">
+<dt id="sans.calculator.slit_length_calculator.SlitlengthCalculator.calculate_slit_length">
+<tt class="descname">calculate_slit_length</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.calculator.slit_length_calculator.SlitlengthCalculator.calculate_slit_length" title="Permalink to this definition">Â¶</a></dt>
+<dd>Calculate slit length.</dd></dl>
+
+<dl class="method">
+<dt id="sans.calculator.slit_length_calculator.SlitlengthCalculator.get_slit_length_unit">
+<tt class="descname">get_slit_length_unit</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.calculator.slit_length_calculator.SlitlengthCalculator.get_slit_length_unit" title="Permalink to this definition">Â¶</a></dt>
+<dd>return the slit length unit.</dd></dl>
+
+<dl class="method">
+<dt id="sans.calculator.slit_length_calculator.SlitlengthCalculator.set_data">
+<tt class="descname">set_data</tt><big>(</big><em>x=None</em>, <em>y=None</em><big>)</big><a class="headerlink" href="#sans.calculator.slit_length_calculator.SlitlengthCalculator.set_data" title="Permalink to this definition">Â¶</a></dt>
+<dd>set data
+:param x, y: x array and y array</dd></dl>
+
+</dd></dl>
+
+</div>
+</div>
+
+
+          </div>
+        </div>
+      </div>
+      <div class="sphinxsidebar">
+        <div class="sphinxsidebarwrapper">
+  <h3><a href="../index.html">Table Of Contents</a></h3>
+  <ul>
+<li><a class="reference internal" href="#">Slit Length Calculator</a><ul>
+<li><a class="reference internal" href="#module-sans.calculator.slit_length_calculator"><tt class="docutils literal"><span class="pre">sans.calculator.slit_length_calculator</span></tt></a></li>
+</ul>
+</li>
+</ul>
+
+  <h4>Previous topic</h4>
+  <p class="topless"><a href="sld_calculator.html"
+                        title="previous chapter">Sld Calculator</a></p>
+  <h3>This Page</h3>
+  <ul class="this-page-menu">
+    <li><a href="../_sources/api/slit_length_calculator.txt"
+           rel="nofollow">Show Source</a></li>
+  </ul>
+<div id="searchbox" style="display: none">
+  <h3>Quick search</h3>
+    <form class="search" action="../search.html" method="get">
+      <input type="text" name="q" size="18" />
+      <input type="submit" value="Go" />
+      <input type="hidden" name="check_keywords" value="yes" />
+      <input type="hidden" name="area" value="default" />
+    </form>
+    <p class="searchtip" style="font-size: 90%">
+    Enter search terms or a module, class or function name.
+    </p>
+</div>
+<script type="text/javascript">$('#searchbox').show(0);</script>
+        </div>
+      </div>
+      <div class="clearer"></div>
+    </div>
+    <div class="related">
+      <h3>Navigation</h3>
+      <ul>
+        <li class="right" style="margin-right: 10px">
+          <a href="../genindex.html" title="General Index"
+             >index</a></li>
+        <li class="right" >
+          <a href="../py-modindex.html" title="Python Module Index"
+             >modules</a> |</li>
+        <li class="right" >
+          <a href="sld_calculator.html" title="Sld Calculator"
+             >previous</a> |</li>
+        <li><a href="../index.html">calculator v0.1.0 documentation</a> &raquo;</li>
+          <li><a href="index.html" >Reference</a> &raquo;</li> 
+      </ul>
+    </div>
+    <div class="footer">
+        &copy; Copyright 2010, Gervaise Alina.
+      Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.0b1.
+    </div>
+  </body>
+</html>
Index: calculator/docs/sphinx/_build/html/genindex.html
===================================================================
--- calculator/docs/sphinx/_build/html/genindex.html	(revision beb374ad8ee7461446b698ccc9fb44b263652b04)
+++ calculator/docs/sphinx/_build/html/genindex.html	(revision 14e9eb3f64b47cc4e72059d8978db96ae2d6d59a)
@@ -48,15 +48,22 @@
 
    <div class="genindex-jumpbox">
-   <a href="#C"><strong>C</strong></a> | <a href="#S"><strong>S</strong></a> 
+   <a href="#C"><strong>C</strong></a> | <a href="#G"><strong>G</strong></a> | <a href="#S"><strong>S</strong></a> 
    </div>
 <h2 id="C">C</h2>
 <table width="100%" class="indextable genindextable"><tr>
   <td width="33%" valign="top"><dl>
-    <dt><a href="api/sld_calculator.html#sans.calculator.sld_calculator.SldCalculator.calculate_coherence_im">calculate_coherence_im() (sans.calculator.sld_calculator.SldCalculator method)</a></dt>
     <dt><a href="api/sld_calculator.html#sans.calculator.sld_calculator.SldCalculator.calculate_length">calculate_length() (sans.calculator.sld_calculator.SldCalculator method)</a></dt>
+    <dt><a href="api/sld_calculator.html#sans.calculator.sld_calculator.SldCalculator.calculate_neutron_sld">calculate_neutron_sld() (sans.calculator.sld_calculator.SldCalculator method)</a></dt>
 </dl></td>
   <td width="33%" valign="top"><dl>
-    <dt><a href="api/sld_calculator.html#sans.calculator.sld_calculator.SldCalculator.calculate_neutron_sld">calculate_neutron_sld() (sans.calculator.sld_calculator.SldCalculator method)</a></dt>
+    <dt><a href="api/slit_length_calculator.html#sans.calculator.slit_length_calculator.SlitlengthCalculator.calculate_slit_length">calculate_slit_length() (sans.calculator.slit_length_calculator.SlitlengthCalculator method)</a></dt>
     <dt><a href="api/sld_calculator.html#sans.calculator.sld_calculator.SldCalculator.calculate_xray_sld">calculate_xray_sld() (sans.calculator.sld_calculator.SldCalculator method)</a></dt>
+</dl></td>
+</tr></table>
+
+<h2 id="G">G</h2>
+<table width="100%" class="indextable genindextable"><tr>
+  <td width="33%" valign="top"><dl>
+    <dt><a href="api/slit_length_calculator.html#sans.calculator.slit_length_calculator.SlitlengthCalculator.get_slit_length_unit">get_slit_length_unit() (sans.calculator.slit_length_calculator.SlitlengthCalculator method)</a></dt>
 </dl></td>
 </tr></table>
@@ -66,8 +73,11 @@
   <td width="33%" valign="top"><dl>
     <dt><a href="api/sld_calculator.html#module-sans.calculator.sld_calculator">sans.calculator.sld_calculator (module)</a></dt>
-    <dt><a href="api/sld_calculator.html#sans.calculator.sld_calculator.SldCalculator.set_value">set_value() (sans.calculator.sld_calculator.SldCalculator method)</a></dt>
+    <dt><a href="api/slit_length_calculator.html#module-sans.calculator.slit_length_calculator">sans.calculator.slit_length_calculator (module)</a></dt>
+    <dt><a href="api/slit_length_calculator.html#sans.calculator.slit_length_calculator.SlitlengthCalculator.set_data">set_data() (sans.calculator.slit_length_calculator.SlitlengthCalculator method)</a></dt>
 </dl></td>
   <td width="33%" valign="top"><dl>
+    <dt><a href="api/sld_calculator.html#sans.calculator.sld_calculator.SldCalculator.set_value">set_value() (sans.calculator.sld_calculator.SldCalculator method)</a></dt>
     <dt><a href="api/sld_calculator.html#sans.calculator.sld_calculator.SldCalculator">SldCalculator (class in sans.calculator.sld_calculator)</a></dt>
+    <dt><a href="api/slit_length_calculator.html#sans.calculator.slit_length_calculator.SlitlengthCalculator">SlitlengthCalculator (class in sans.calculator.slit_length_calculator)</a></dt>
 </dl></td>
 </tr></table>
Index: calculator/docs/sphinx/_build/html/index.html
===================================================================
--- calculator/docs/sphinx/_build/html/index.html	(revision beb374ad8ee7461446b698ccc9fb44b263652b04)
+++ calculator/docs/sphinx/_build/html/index.html	(revision 14e9eb3f64b47cc4e72059d8978db96ae2d6d59a)
@@ -67,4 +67,5 @@
 <li class="toctree-l1"><a class="reference internal" href="api/index.html">Reference</a><ul>
 <li class="toctree-l2"><a class="reference internal" href="api/sld_calculator.html">Sld Calculator</a></li>
+<li class="toctree-l2"><a class="reference internal" href="api/slit_length_calculator.html">Slit Length Calculator</a></li>
 </ul>
 </li>
Index: calculator/docs/sphinx/_build/html/py-modindex.html
===================================================================
--- calculator/docs/sphinx/_build/html/py-modindex.html	(revision beb374ad8ee7461446b698ccc9fb44b263652b04)
+++ calculator/docs/sphinx/_build/html/py-modindex.html	(revision 14e9eb3f64b47cc4e72059d8978db96ae2d6d59a)
@@ -69,4 +69,9 @@
        <a href="api/sld_calculator.html#module-sans.calculator.sld_calculator"><tt class="xref">sans.calculator.sld_calculator</tt></a></td><td>
        <em></em></td></tr>
+     <tr class="cg-1">
+       <td></td>
+       <td>&nbsp;&nbsp;&nbsp;
+       <a href="api/slit_length_calculator.html#module-sans.calculator.slit_length_calculator"><tt class="xref">sans.calculator.slit_length_calculator</tt></a></td><td>
+       <em></em></td></tr>
    </table>
 
Index: calculator/docs/sphinx/_build/html/searchindex.js
===================================================================
--- calculator/docs/sphinx/_build/html/searchindex.js	(revision beb374ad8ee7461446b698ccc9fb44b263652b04)
+++ calculator/docs/sphinx/_build/html/searchindex.js	(revision 14e9eb3f64b47cc4e72059d8978db96ae2d6d59a)
@@ -1,1 +1,1 @@
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