# -*- coding: utf-8 -*- """ Global defaults and various utility functions usable by the general GUI """ import os import re import sys import imp import warnings import webbrowser import urllib.parse import numpy as np warnings.simplefilter("ignore") import logging from PyQt5 import QtCore from PyQt5 import QtGui from PyQt5 import QtWidgets from periodictable import formula as Formula from sas.qtgui.Plotting import DataTransform from sas.qtgui.Plotting.ConvertUnits import convertUnit from sas.qtgui.Plotting.PlotterData import Data1D from sas.qtgui.Plotting.PlotterData import Data2D from sas.sascalc.dataloader.loader import Loader from sas.qtgui.Utilities import CustomDir ## TODO: CHANGE FOR SHIPPED PATH IN RELEASE if os.path.splitext(sys.argv[0])[1].lower() != ".py": HELP_DIRECTORY_LOCATION = "doc" else: HELP_DIRECTORY_LOCATION = "docs/sphinx-docs/build/html" IMAGES_DIRECTORY_LOCATION = HELP_DIRECTORY_LOCATION + "/_images" # This matches the ID of a plot created using FittingLogic._create1DPlot, e.g. # "5 [P(Q)] modelname" # or # "4 modelname". # Useful for determining whether the plot in question is for an intermediate result, such as P(Q) or S(Q) in the # case of a product model; the identifier for this is held in square brackets, as in the example above. theory_plot_ID_pattern = re.compile(r"^([0-9]+)\s+(\[(.*)\]\s+)?(.*)$") def get_app_dir(): """ The application directory is the one where the default custom_config.py file resides. :returns: app_path - the path to the applicatin directory """ # First, try the directory of the executable we are running app_path = sys.path[0] if os.path.isfile(app_path): app_path = os.path.dirname(app_path) if os.path.isfile(os.path.join(app_path, "custom_config.py")): app_path = os.path.abspath(app_path) #logging.info("Using application path: %s", app_path) return app_path # Next, try the current working directory if os.path.isfile(os.path.join(os.getcwd(), "custom_config.py")): #logging.info("Using application path: %s", os.getcwd()) return os.path.abspath(os.getcwd()) # Finally, try the directory of the sasview module # TODO: gui_manager will have to know about sasview until we # clean all these module variables and put them into a config class # that can be passed by sasview.py. # logging.info(sys.executable) # logging.info(str(sys.argv)) from sas import sasview as sasview app_path = os.path.dirname(sasview.__file__) # logging.info("Using application path: %s", app_path) return app_path def get_user_directory(): """ Returns the user's home directory """ userdir = os.path.join(os.path.expanduser("~"), ".sasview") if not os.path.isdir(userdir): os.makedirs(userdir) return userdir def _find_local_config(confg_file, path): """ Find configuration file for the current application """ config_module = None fObj = None try: fObj, path_config, descr = imp.find_module(confg_file, [path]) config_module = imp.load_module(confg_file, fObj, path_config, descr) except ImportError: pass #logging.error("Error loading %s/%s: %s" % (path, confg_file, sys.exc_value)) except ValueError: print("Value error") pass finally: if fObj is not None: fObj.close() #logging.info("GuiManager loaded %s/%s" % (path, confg_file)) return config_module # Get APP folder PATH_APP = get_app_dir() DATAPATH = PATH_APP # Read in the local config, which can either be with the main # application or in the installation directory config = _find_local_config('local_config', PATH_APP) if config is None: config = _find_local_config('local_config', os.getcwd()) else: pass c_conf_dir = CustomDir.setup_conf_dir(PATH_APP) custom_config = _find_local_config('custom_config', c_conf_dir) if custom_config is None: custom_config = _find_local_config('custom_config', os.getcwd()) if custom_config is None: msgConfig = "Custom_config file was not imported" #read some constants from config APPLICATION_STATE_EXTENSION = config.APPLICATION_STATE_EXTENSION APPLICATION_NAME = config.__appname__ SPLASH_SCREEN_PATH = config.SPLASH_SCREEN_PATH WELCOME_PANEL_ON = config.WELCOME_PANEL_ON SPLASH_SCREEN_WIDTH = config.SPLASH_SCREEN_WIDTH SPLASH_SCREEN_HEIGHT = config.SPLASH_SCREEN_HEIGHT SS_MAX_DISPLAY_TIME = config.SS_MAX_DISPLAY_TIME if not WELCOME_PANEL_ON: WELCOME_PANEL_SHOW = False else: WELCOME_PANEL_SHOW = True try: DATALOADER_SHOW = custom_config.DATALOADER_SHOW TOOLBAR_SHOW = custom_config.TOOLBAR_SHOW FIXED_PANEL = custom_config.FIXED_PANEL if WELCOME_PANEL_ON: WELCOME_PANEL_SHOW = custom_config.WELCOME_PANEL_SHOW PLOPANEL_WIDTH = custom_config.PLOPANEL_WIDTH DATAPANEL_WIDTH = custom_config.DATAPANEL_WIDTH GUIFRAME_WIDTH = custom_config.GUIFRAME_WIDTH GUIFRAME_HEIGHT = custom_config.GUIFRAME_HEIGHT CONTROL_WIDTH = custom_config.CONTROL_WIDTH CONTROL_HEIGHT = custom_config.CONTROL_HEIGHT DEFAULT_PERSPECTIVE = custom_config.DEFAULT_PERSPECTIVE CLEANUP_PLOT = custom_config.CLEANUP_PLOT # custom open_path open_folder = custom_config.DEFAULT_OPEN_FOLDER if open_folder is not None and os.path.isdir(open_folder): DEFAULT_OPEN_FOLDER = os.path.abspath(open_folder) else: DEFAULT_OPEN_FOLDER = PATH_APP except AttributeError: DATALOADER_SHOW = True TOOLBAR_SHOW = True FIXED_PANEL = True WELCOME_PANEL_SHOW = False PLOPANEL_WIDTH = config.PLOPANEL_WIDTH DATAPANEL_WIDTH = config.DATAPANEL_WIDTH GUIFRAME_WIDTH = config.GUIFRAME_WIDTH GUIFRAME_HEIGHT = config.GUIFRAME_HEIGHT CONTROL_WIDTH = -1 CONTROL_HEIGHT = -1 DEFAULT_PERSPECTIVE = None CLEANUP_PLOT = False DEFAULT_OPEN_FOLDER = PATH_APP #DEFAULT_STYLE = config.DEFAULT_STYLE PLUGIN_STATE_EXTENSIONS = config.PLUGIN_STATE_EXTENSIONS OPEN_SAVE_MENU = config.OPEN_SAVE_PROJECT_MENU VIEW_MENU = config.VIEW_MENU EDIT_MENU = config.EDIT_MENU extension_list = [] if APPLICATION_STATE_EXTENSION is not None: extension_list.append(APPLICATION_STATE_EXTENSION) EXTENSIONS = PLUGIN_STATE_EXTENSIONS + extension_list try: PLUGINS_WLIST = '|'.join(config.PLUGINS_WLIST) except AttributeError: PLUGINS_WLIST = '' APPLICATION_WLIST = config.APPLICATION_WLIST IS_WIN = True IS_LINUX = False CLOSE_SHOW = True TIME_FACTOR = 2 NOT_SO_GRAPH_LIST = ["BoxSum"] class Communicate(QtCore.QObject): """ Utility class for tracking of the Qt signals """ # File got successfully read fileReadSignal = QtCore.pyqtSignal(list) # Open File returns "list" of paths fileDataReceivedSignal = QtCore.pyqtSignal(dict) # Update Main window status bar with "str" # Old "StatusEvent" statusBarUpdateSignal = QtCore.pyqtSignal(str) # Send data to the current perspective updatePerspectiveWithDataSignal = QtCore.pyqtSignal(list) # New data in current perspective updateModelFromPerspectiveSignal = QtCore.pyqtSignal(QtGui.QStandardItem) # New theory data in current perspective updateTheoryFromPerspectiveSignal = QtCore.pyqtSignal(QtGui.QStandardItem) # Request to delete plots (in the theory view) related to a given model ID deleteIntermediateTheoryPlotsSignal = QtCore.pyqtSignal(str) # New plot requested from the GUI manager # Old "NewPlotEvent" plotRequestedSignal = QtCore.pyqtSignal(list) # Plot from file names plotFromFilenameSignal = QtCore.pyqtSignal(str) # Plot update requested from a perspective plotUpdateSignal = QtCore.pyqtSignal(list) # Progress bar update value progressBarUpdateSignal = QtCore.pyqtSignal(int) # Workspace charts added/removed activeGraphsSignal = QtCore.pyqtSignal(list) # Current workspace chart's name changed activeGraphName = QtCore.pyqtSignal(tuple) # Current perspective changed perspectiveChangedSignal = QtCore.pyqtSignal(str) # File/dataset got deleted dataDeletedSignal = QtCore.pyqtSignal(list) # Send data to Data Operation Utility panel sendDataToPanelSignal = QtCore.pyqtSignal(dict) # Send result of Data Operation Utility panel to Data Explorer updateModelFromDataOperationPanelSignal = QtCore.pyqtSignal(QtGui.QStandardItem, dict) # Notify about a new custom plugin being written/deleted/modified customModelDirectoryChanged = QtCore.pyqtSignal() # Notify the gui manager about new data to be added to the grid view sendDataToGridSignal = QtCore.pyqtSignal(list) # Action Save Analysis triggered saveAnalysisSignal = QtCore.pyqtSignal() # Mask Editor requested maskEditorSignal = QtCore.pyqtSignal(Data2D) #second Mask Editor for external extMaskEditorSignal = QtCore.pyqtSignal() # Fitting parameter copy to clipboard copyFitParamsSignal = QtCore.pyqtSignal(str) # Fitting parameter paste from clipboard pasteFitParamsSignal = QtCore.pyqtSignal() # Notify about new categories/models from category manager updateModelCategoriesSignal = QtCore.pyqtSignal() def updateModelItemWithPlot(item, update_data, name=""): """ Adds a checkboxed row named "name" to QStandardItem Adds 'update_data' to that row. """ assert isinstance(item, QtGui.QStandardItem) # Check if data with the same ID is already present for index in range(item.rowCount()): plot_item = item.child(index) if plot_item.isCheckable(): plot_data = plot_item.child(0).data() if plot_data.id is not None and \ (plot_data.name == update_data.name or plot_data.id == update_data.id): # if plot_data.id is not None and plot_data.id == update_data.id: # replace data section in item plot_item.child(0).setData(update_data) plot_item.setText(name) # Plot title if any if plot_item.child(1).hasChildren(): plot_item.child(1).child(0).setText("Title: %s"%name) # Force redisplay return # Create the new item checkbox_item = createModelItemWithPlot(update_data, name) # Append the new row to the main item item.appendRow(checkbox_item) def deleteRedundantPlots(item, new_plots): """ Checks all plots that are children of the given item; if any have an ID or name not included in new_plots, it is deleted. Useful for e.g. switching from P(Q)S(Q) to P(Q); this would remove the old S(Q) plot. Ensure that new_plots contains ALL the relevant plots(!!!) """ assert isinstance(item, QtGui.QStandardItem) names = [p.name for p in new_plots if p.name is not None] ids = [p.id for p in new_plots if p.id is not None] items_to_delete = [] for index in range(item.rowCount()): plot_item = item.child(index) if plot_item.isCheckable(): plot_data = plot_item.child(0).data() if (plot_data.id is not None) and (plot_data.id not in ids) and (plot_data.name not in names): items_to_delete.append(plot_item) for plot_item in items_to_delete: item.removeRow(plot_item.row()) class HashableStandardItem(QtGui.QStandardItem): """ Subclassed standard item with reimplemented __hash__ to allow for use as an index. """ def __init__(self, parent=None): super(HashableStandardItem, self).__init__() def __hash__(self): ''' just a random hash value ''' #return hash(self.__init__) return 0 def clone(self): ''' Assure __hash__ is cloned as well''' clone = super(HashableStandardItem, self).clone() clone.__hash__ = self.__hash__ return clone def getMonospaceFont(): """Convenience function; returns a monospace font to be used in any shells, code editors, etc.""" # Note: Consolas is only available on Windows; the style hint is used on other operating systems font = QtGui.QFont("Consolas", 10) font.setStyleHint(QtGui.QFont.Monospace, QtGui.QFont.PreferQuality) return font def createModelItemWithPlot(update_data, name=""): """ Creates a checkboxed QStandardItem named "name" Adds 'update_data' to that row. """ py_update_data = update_data checkbox_item = HashableStandardItem() checkbox_item.setCheckable(True) checkbox_item.setCheckState(QtCore.Qt.Checked) checkbox_item.setText(name) # Add "Info" item if isinstance(py_update_data, (Data1D, Data2D)): # If Data1/2D added - extract Info from it info_item = infoFromData(py_update_data) else: # otherwise just add a naked item info_item = QtGui.QStandardItem("Info") # Add the actual Data1D/Data2D object object_item = QtGui.QStandardItem() object_item.setData(update_data) # Set the data object as the first child checkbox_item.setChild(0, object_item) # Set info_item as the second child checkbox_item.setChild(1, info_item) # And return the newly created item return checkbox_item def updateModelItem(item, update_data, name=""): """ Adds a simple named child to QStandardItem """ assert isinstance(item, QtGui.QStandardItem) # Add the actual Data1D/Data2D object object_item = QtGui.QStandardItem() object_item.setText(name) object_item.setData(update_data) # Append the new row to the main item item.appendRow(object_item) def updateModelItemStatus(model_item, filename="", name="", status=2): """ Update status of checkbox related to high- and low-Q extrapolation choice in Invariant Panel """ assert isinstance(model_item, QtGui.QStandardItemModel) # Iterate over model looking for items with checkboxes for index in range(model_item.rowCount()): item = model_item.item(index) if item.text() == filename and item.isCheckable() \ and item.checkState() == QtCore.Qt.Checked: # Going 1 level deeper only for index_2 in range(item.rowCount()): item_2 = item.child(index_2) if item_2 and item_2.isCheckable() and item_2.text() == name: item_2.setCheckState(status) return def itemFromFilename(filename, model_item): """ Returns the model item text=filename in the model """ assert isinstance(model_item, QtGui.QStandardItemModel) assert isinstance(filename, str) # Iterate over model looking for named items item = list([i for i in [model_item.item(index) for index in range(model_item.rowCount())] if str(i.text()) == filename]) return item[0] if len(item)>0 else None def plotsFromModel(model_name, model_item): """ Returns the list of plots for the item with model name in the model """ assert isinstance(model_item, QtGui.QStandardItem) assert isinstance(model_name, str) plot_data = [] # Iterate over model looking for named items for index in range(model_item.rowCount()): item = model_item.child(index) if isinstance(item.data(), (Data1D, Data2D)): plot_data.append(item.data()) if model_name in str(item.text()): #plot_data.append(item.child(0).data()) # Going 1 level deeper only for index_2 in range(item.rowCount()): item_2 = item.child(index_2) if item_2 and isinstance(item_2.data(), (Data1D, Data2D)): plot_data.append(item_2.data()) return plot_data def plotsFromFilename(filename, model_item): """ Returns the list of plots for the item with text=filename in the model """ assert isinstance(model_item, QtGui.QStandardItemModel) assert isinstance(filename, str) plot_data = {} # Iterate over model looking for named items for index in range(model_item.rowCount()): item = model_item.item(index) if filename in str(item.text()): # TODO: assure item type is correct (either data1/2D or Plotter) plot_data[item] = item.child(0).data() # Going 1 level deeper only for index_2 in range(item.rowCount()): item_2 = item.child(index_2) if item_2 and item_2.isCheckable(): # TODO: assure item type is correct (either data1/2D or Plotter) plot_data[item_2] = item_2.child(0).data() return plot_data def plotsFromCheckedItems(model_item): """ Returns the list of plots for items in the model which are checked """ assert isinstance(model_item, QtGui.QStandardItemModel) plot_data = [] # Iterate over model looking for items with checkboxes for index in range(model_item.rowCount()): item = model_item.item(index) # Going 1 level deeper only for index_2 in range(item.rowCount()): item_2 = item.child(index_2) if item_2 and item_2.isCheckable() and item_2.checkState() == QtCore.Qt.Checked: # TODO: assure item type is correct (either data1/2D or Plotter) plot_data.append((item_2, item_2.child(0).data())) if item.isCheckable() and item.checkState() == QtCore.Qt.Checked: # TODO: assure item type is correct (either data1/2D or Plotter) plot_data.append((item, item.child(0).data())) return plot_data def infoFromData(data): """ Given Data1D/Data2D object, extract relevant Info elements and add them to a model item """ assert isinstance(data, (Data1D, Data2D)) info_item = QtGui.QStandardItem("Info") title_item = QtGui.QStandardItem("Title: " + data.title) info_item.appendRow(title_item) run_item = QtGui.QStandardItem("Run: " + str(data.run)) info_item.appendRow(run_item) type_item = QtGui.QStandardItem("Type: " + str(data.__class__.__name__)) info_item.appendRow(type_item) if data.path: path_item = QtGui.QStandardItem("Path: " + data.path) info_item.appendRow(path_item) if data.instrument: instr_item = QtGui.QStandardItem("Instrument: " + data.instrument) info_item.appendRow(instr_item) process_item = QtGui.QStandardItem("Process") if isinstance(data.process, list) and data.process: for process in data.process: process_date = process.date process_date_item = QtGui.QStandardItem("Date: " + process_date) process_item.appendRow(process_date_item) process_descr = process.description process_descr_item = QtGui.QStandardItem("Description: " + process_descr) process_item.appendRow(process_descr_item) process_name = process.name process_name_item = QtGui.QStandardItem("Name: " + process_name) process_item.appendRow(process_name_item) info_item.appendRow(process_item) return info_item def dataFromItem(item): """ Retrieve Data1D/2D component from QStandardItem. The assumption - data stored in SasView standard, in child 0 """ return item.child(0).data() def openLink(url): """ Open a URL in an external browser. Check the URL first, though. """ parsed_url = urllib.parse.urlparse(url) if parsed_url.scheme: webbrowser.open(url) else: msg = "Attempt at opening an invalid URL" raise AttributeError(msg) def retrieveData1d(data): """ Retrieve 1D data from file and construct its text representation """ if not isinstance(data, Data1D): msg = "Incorrect type passed to retrieveData1d" raise AttributeError(msg) try: xmin = min(data.x) ymin = min(data.y) except: msg = "Unable to find min/max of \n data named %s" % \ data.filename #logging.error(msg) raise ValueError(msg) text = data.__str__() text += 'Data Min Max:\n' text += 'X_min = %s: X_max = %s\n' % (xmin, max(data.x)) text += 'Y_min = %s: Y_max = %s\n' % (ymin, max(data.y)) if data.dy is not None: text += 'dY_min = %s: dY_max = %s\n' % (min(data.dy), max(data.dy)) text += '\nData Points:\n' x_st = "X" for index in range(len(data.x)): if data.dy is not None and len(data.dy) > index: dy_val = data.dy[index] else: dy_val = 0.0 if data.dx is not None and len(data.dx) > index: dx_val = data.dx[index] else: dx_val = 0.0 if data.dxl is not None and len(data.dxl) > index: if index == 0: x_st = "Xl" dx_val = data.dxl[index] elif data.dxw is not None and len(data.dxw) > index: if index == 0: x_st = "Xw" dx_val = data.dxw[index] if index == 0: text += " \t \t \t \t\n" % x_st text += "%s \t%s \t%s \t%s \t%s\n" % (index, data.x[index], data.y[index], dy_val, dx_val) return text def retrieveData2d(data): """ Retrieve 2D data from file and construct its text representation """ if not isinstance(data, Data2D): msg = "Incorrect type passed to retrieveData2d" raise AttributeError(msg) text = data.__str__() text += 'Data Min Max:\n' text += 'I_min = %s\n' % min(data.data) text += 'I_max = %s\n\n' % max(data.data) text += 'Data (First 2501) Points:\n' text += 'Data columns include err(I).\n' text += 'ASCII data starts here.\n' text += " \t \t \t \t \t \t\n" di_val = 0.0 dx_val = 0.0 dy_val = 0.0 len_data = len(data.qx_data) for index in range(0, len_data): x_val = data.qx_data[index] y_val = data.qy_data[index] i_val = data.data[index] if data.err_data is not None: di_val = data.err_data[index] if data.dqx_data is not None: dx_val = data.dqx_data[index] if data.dqy_data is not None: dy_val = data.dqy_data[index] text += "%s \t%s \t%s \t%s \t%s \t%s \t%s\n" % (index, x_val, y_val, i_val, di_val, dx_val, dy_val) # Takes too long time for typical data2d: Break here if index >= 2500: text += ".............\n" break return text def onTXTSave(data, path): """ Save file as formatted txt """ with open(path,'w') as out: has_errors = True if data.dy is None or not data.dy.any(): has_errors = False # Sanity check if has_errors: try: if len(data.y) != len(data.dy): has_errors = False except: has_errors = False if has_errors: if data.dx is not None and data.dx.any(): out.write(" \n") else: out.write(" \n") else: out.write(" \n") for i in range(len(data.x)): if has_errors: if data.dx is not None and data.dx.any(): if data.dx[i] is not None: out.write("%g %g %g %g\n" % (data.x[i], data.y[i], data.dy[i], data.dx[i])) else: out.write("%g %g %g\n" % (data.x[i], data.y[i], data.dy[i])) else: out.write("%g %g %g\n" % (data.x[i], data.y[i], data.dy[i])) else: out.write("%g %g\n" % (data.x[i], data.y[i])) def saveData1D(data): """ Save 1D data points """ default_name = os.path.basename(data.filename) default_name, extension = os.path.splitext(default_name) if not extension: extension = ".txt" default_name += "_out" + extension wildcard = "Text files (*.txt);;"\ "CanSAS 1D files(*.xml)" kwargs = { 'caption' : 'Save As', 'directory' : default_name, 'filter' : wildcard, 'parent' : None, } # Query user for filename. filename_tuple = QtWidgets.QFileDialog.getSaveFileName(**kwargs) filename = filename_tuple[0] # User cancelled. if not filename: return #Instantiate a loader loader = Loader() if os.path.splitext(filename)[1].lower() == ".txt": onTXTSave(data, filename) if os.path.splitext(filename)[1].lower() == ".xml": loader.save(filename, data, ".xml") def saveData2D(data): """ Save data2d dialog """ default_name = os.path.basename(data.filename) default_name, _ = os.path.splitext(default_name) ext_format = ".dat" default_name += "_out" + ext_format wildcard = "IGOR/DAT 2D file in Q_map (*.dat)" kwargs = { 'caption' : 'Save As', 'directory' : default_name, 'filter' : wildcard, 'parent' : None, } # Query user for filename. filename_tuple = QtWidgets.QFileDialog.getSaveFileName(**kwargs) filename = filename_tuple[0] # User cancelled. if not filename: return #Instantiate a loader loader = Loader() if os.path.splitext(filename)[1].lower() == ext_format: loader.save(filename, data, ext_format) class FormulaValidator(QtGui.QValidator): def __init__(self, parent=None): super(FormulaValidator, self).__init__(parent) def validate(self, input, pos): self._setStyleSheet("") return QtGui.QValidator.Acceptable, pos #try: # Formula(str(input)) # self._setStyleSheet("") # return QtGui.QValidator.Acceptable, pos #except Exception as e: # self._setStyleSheet("background-color:pink;") # return QtGui.QValidator.Intermediate, pos def _setStyleSheet(self, value): try: if self.parent(): self.parent().setStyleSheet(value) except: pass def xyTransform(data, xLabel="", yLabel=""): """ Transforms x and y in View and set the scale """ # Changing the scale might be incompatible with # currently displayed data (for instance, going # from ln to log when all plotted values have # negative natural logs). # Go linear and only change the scale at the end. xscale = 'linear' yscale = 'linear' # Local data is either 1D or 2D if data.id == 'fit': return # make sure we have some function to operate on if xLabel is None: xLabel = 'log10(x)' if yLabel is None: yLabel = 'log10(y)' # control axis labels from the panel itself yname, yunits = data.get_yaxis() xname, xunits = data.get_xaxis() # Goes through all possible scales # self.x_label is already wrapped with Latex "$", so using the argument # X if xLabel == "x": data.transformX(DataTransform.toX, DataTransform.errToX) xLabel = "%s(%s)" % (xname, xunits) if xLabel == "x^(2)": data.transformX(DataTransform.toX2, DataTransform.errToX2) xunits = convertUnit(2, xunits) xLabel = "%s^{2}(%s)" % (xname, xunits) if xLabel == "x^(4)": data.transformX(DataTransform.toX4, DataTransform.errToX4) xunits = convertUnit(4, xunits) xLabel = "%s^{4}(%s)" % (xname, xunits) if xLabel == "ln(x)": data.transformX(DataTransform.toLogX, DataTransform.errToLogX) xLabel = "\ln{(%s)}(%s)" % (xname, xunits) if xLabel == "log10(x)": data.transformX(DataTransform.toX_pos, DataTransform.errToX_pos) xscale = 'log' xLabel = "%s(%s)" % (xname, xunits) if xLabel == "log10(x^(4))": data.transformX(DataTransform.toX4, DataTransform.errToX4) xunits = convertUnit(4, xunits) xLabel = "%s^{4}(%s)" % (xname, xunits) xscale = 'log' # Y if yLabel == "ln(y)": data.transformY(DataTransform.toLogX, DataTransform.errToLogX) yLabel = "\ln{(%s)}(%s)" % (yname, yunits) if yLabel == "y": data.transformY(DataTransform.toX, DataTransform.errToX) yLabel = "%s(%s)" % (yname, yunits) if yLabel == "log10(y)": data.transformY(DataTransform.toX_pos, DataTransform.errToX_pos) yscale = 'log' yLabel = "%s(%s)" % (yname, yunits) if yLabel == "y^(2)": data.transformY(DataTransform.toX2, DataTransform.errToX2) yunits = convertUnit(2, yunits) yLabel = "%s^{2}(%s)" % (yname, yunits) if yLabel == "1/y": data.transformY(DataTransform.toOneOverX, DataTransform.errOneOverX) yunits = convertUnit(-1, yunits) yLabel = "1/%s(%s)" % (yname, yunits) if yLabel == "y*x^(2)": data.transformY(DataTransform.toYX2, DataTransform.errToYX2) xunits = convertUnit(2, xunits) yLabel = "%s \ \ %s^{2}(%s%s)" % (yname, xname, yunits, xunits) if yLabel == "y*x^(4)": data.transformY(DataTransform.toYX4, DataTransform.errToYX4) xunits = convertUnit(4, xunits) yLabel = "%s \ \ %s^{4}(%s%s)" % (yname, xname, yunits, xunits) if yLabel == "1/sqrt(y)": data.transformY(DataTransform.toOneOverSqrtX, DataTransform.errOneOverSqrtX) yunits = convertUnit(-0.5, yunits) yLabel = "1/\sqrt{%s}(%s)" % (yname, yunits) if yLabel == "ln(y*x)": data.transformY(DataTransform.toLogXY, DataTransform.errToLogXY) yLabel = "\ln{(%s \ \ %s)}(%s%s)" % (yname, xname, yunits, xunits) if yLabel == "ln(y*x^(2))": data.transformY(DataTransform.toLogYX2, DataTransform.errToLogYX2) xunits = convertUnit(2, xunits) yLabel = "\ln (%s \ \ %s^{2})(%s%s)" % (yname, xname, yunits, xunits) if yLabel == "ln(y*x^(4))": data.transformY(DataTransform.toLogYX4, DataTransform.errToLogYX4) xunits = convertUnit(4, xunits) yLabel = "\ln (%s \ \ %s^{4})(%s%s)" % (yname, xname, yunits, xunits) if yLabel == "log10(y*x^(4))": data.transformY(DataTransform.toYX4, DataTransform.errToYX4) xunits = convertUnit(4, xunits) yscale = 'log' yLabel = "%s \ \ %s^{4}(%s%s)" % (yname, xname, yunits, xunits) # Perform the transformation of data in data1d->View data.transformView() return (xLabel, yLabel, xscale, yscale) def formatNumber(value, high=False): """ Return a float in a standardized, human-readable formatted string. This is used to output readable (e.g. x.xxxe-y) values to the panel. """ try: value = float(value) except: output = "NaN" return output.lstrip().rstrip() if high: output = "%-7.5g" % value else: output = "%-5.3g" % value return output.lstrip().rstrip() def replaceHTMLwithUTF8(html): """ Replace some important HTML-encoded characters with their UTF-8 equivalents """ # Angstrom html_out = html.replace("Å", "Å") # infinity html_out = html_out.replace("∞", "∞") # +/- html_out = html_out.replace("±", "±") return html_out def replaceHTMLwithASCII(html): """ Replace some important HTML-encoded characters with their ASCII equivalents """ # Angstrom html_out = html.replace("Å", "Ang") # infinity html_out = html_out.replace("∞", "inf") # +/- html_out = html_out.replace("±", "+/-") return html_out def convertUnitToUTF8(unit): """ Convert ASCII unit display into UTF-8 symbol """ if unit == "1/A": return "Å-1" elif unit == "1/cm": return "cm-1" elif unit == "Ang": return "Å" elif unit == "1e-6/Ang^2": return "10-6/Å2" elif unit == "inf": return "∞" elif unit == "-inf": return "-∞" else: return unit def convertUnitToHTML(unit): """ Convert ASCII unit display into well rendering HTML """ if unit == "1/A": return "Å-1" elif unit == "1/cm": return "cm-1" elif unit == "Ang": return "Å" elif unit == "1e-6/Ang^2": return "10-6/Å2" elif unit == "inf": return "∞" elif unit == "-inf": return "-∞" else: return unit def parseName(name, expression): """ remove "_" in front of a name """ if re.match(expression, name) is not None: word = re.split(expression, name, 1) for item in word: if item.lstrip().rstrip() != '': return item else: return name def toDouble(value_string): """ toFloat conversion which cares deeply about user's locale """ # Holy shit this escalated quickly in Qt5. # No more float() cast on general locales. value = QtCore.QLocale().toFloat(value_string) if value[1]: return value[0] # Try generic locale value = QtCore.QLocale(QtCore.QLocale('en_US')).toFloat(value_string) if value[1]: return value[0] else: raise TypeError def findNextFilename(filename, directory): """ Finds the next available (non-existing) name for 'filename' in 'directory'. plugin.py -> plugin (n).py - for first 'n' for which the file doesn't exist """ basename, ext = os.path.splitext(filename) # limit the number of copies MAX_FILENAMES = 1000 # Start with (1) number_ext = 1 proposed_filename = "" found_filename = False # Find the next available filename or exit if too many copies while not found_filename or number_ext > MAX_FILENAMES: proposed_filename = basename + " ("+str(number_ext)+")" + ext if os.path.exists(os.path.join(directory, proposed_filename)): number_ext += 1 else: found_filename = True return proposed_filename class DoubleValidator(QtGui.QDoubleValidator): """ Allow only dots as decimal separator """ def validate(self, input, pos): """ Return invalid for commas """ if input is not None and ',' in input: return (QtGui.QValidator.Invalid, input, pos) return super(DoubleValidator, self).validate(input, pos) def fixup(self, input): """ Correct (remove) potential preexisting content """ super(DoubleValidator, self).fixup(input) input = input.replace(",", "") def checkModel(path): """ Check that the model save in file 'path' can run. """ # The following return needs to be removed once # the unittest related changes in Sasmodels are commited # return True # try running the model from sasmodels.sasview_model import load_custom_model Model = load_custom_model(path) model = Model() q = np.array([0.01, 0.1]) _ = model.evalDistribution(q) qx, qy = np.array([0.01, 0.01]), np.array([0.1, 0.1]) _ = model.evalDistribution([qx, qy]) # check the model's unit tests run from sasmodels.model_test import run_one # TestSuite module in Qt5 now deletes tests in the suite after running, # so suite[0] in run_one() in sasmodels/model_test.py will contain [None] and # test.info.tests will raise. # Not sure how to change the behaviour here, most likely sasmodels will have to # be modified result = run_one(path) return result def enum(*sequential, **named): """Create an enumeration object from a list of strings""" enums = dict(zip(sequential, range(len(sequential))), **named) return type('Enum', (), enums)