1 | # global |
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2 | import logging |
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3 | from PyQt5 import QtCore |
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4 | from PyQt5 import QtGui |
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5 | from PyQt5 import QtWidgets |
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6 | |
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7 | from periodictable import formula as Formula |
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8 | from periodictable.xsf import xray_energy, xray_sld |
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9 | from periodictable.nsf import neutron_scattering |
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10 | |
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11 | import sas.qtgui.Utilities.GuiUtils as GuiUtils |
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12 | |
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13 | from sas.qtgui.UI import main_resources_rc |
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14 | |
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15 | # Local UI |
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16 | from sas.qtgui.Calculators.UI.SldPanel import Ui_SldPanel |
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17 | |
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18 | from sas.qtgui.Utilities.GuiUtils import enum |
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19 | |
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20 | MODEL = enum( |
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21 | 'MOLECULAR_FORMULA', |
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22 | 'MASS_DENSITY', |
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23 | 'NEUTRON_WAVELENGTH', |
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24 | 'NEUTRON_SLD_REAL', |
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25 | 'NEUTRON_SLD_IMAG', |
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26 | 'XRAY_WAVELENGTH', |
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27 | 'XRAY_SLD_REAL', |
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28 | 'XRAY_SLD_IMAG', |
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29 | 'NEUTRON_INC_XS', |
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30 | 'NEUTRON_ABS_XS', |
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31 | 'NEUTRON_LENGTH', |
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32 | ) |
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33 | |
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34 | class SldResult(object): |
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35 | def __init__(self, molecular_formula, mass_density, |
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36 | neutron_wavelength, neutron_sld_real, neutron_sld_imag, |
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37 | xray_wavelength, xray_sld_real, xray_sld_imag, |
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38 | neutron_inc_xs, neutron_abs_xs, neutron_length): |
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39 | |
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40 | self.molecular_formula = molecular_formula |
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41 | self.mass_density = mass_density |
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42 | self.neutron_wavelength = neutron_wavelength |
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43 | self.neutron_sld_real = neutron_sld_real |
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44 | self.neutron_sld_imag = neutron_sld_imag |
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45 | self.xray_wavelength = xray_wavelength |
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46 | self.xray_sld_real = xray_sld_real |
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47 | self.xray_sld_imag = xray_sld_imag |
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48 | self.neutron_inc_xs = neutron_inc_xs |
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49 | self.neutron_abs_xs = neutron_abs_xs |
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50 | self.neutron_length = neutron_length |
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51 | |
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52 | def sldAlgorithm(molecular_formula, mass_density, neutron_wavelength, xray_wavelength): |
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53 | |
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54 | xray_sld_real, xray_sld_imag = xray_sld( |
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55 | compound=molecular_formula, |
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56 | density=mass_density, |
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57 | wavelength=xray_wavelength) |
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58 | |
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59 | (neutron_sld_real, neutron_sld_imag, _), (_, neutron_abs_xs, neutron_inc_xs), neutron_length = \ |
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60 | neutron_scattering( |
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61 | compound=molecular_formula, |
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62 | density=mass_density, |
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63 | wavelength=neutron_wavelength) |
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64 | |
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65 | SCALE = 1e-6 |
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66 | |
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67 | # neutron sld |
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68 | scaled_neutron_sld_real = SCALE * neutron_sld_real |
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69 | scaled_neutron_sld_imag = SCALE * abs(neutron_sld_imag) |
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70 | |
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71 | # xray sld |
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72 | scaled_xray_sld_real = SCALE * xray_sld_real |
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73 | scaled_xray_sld_imag = SCALE * abs(xray_sld_imag) |
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74 | |
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75 | |
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76 | return SldResult( |
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77 | molecular_formula, mass_density, |
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78 | neutron_wavelength, scaled_neutron_sld_real, scaled_neutron_sld_imag, |
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79 | xray_wavelength, scaled_xray_sld_real, scaled_xray_sld_imag, |
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80 | neutron_inc_xs, neutron_abs_xs, neutron_length) |
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81 | |
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82 | |
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83 | class SldPanel(QtWidgets.QDialog): |
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84 | |
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85 | def __init__(self, parent=None): |
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86 | super(SldPanel, self).__init__() |
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87 | |
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88 | self.manager = parent |
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89 | |
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90 | self.setupUi() |
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91 | # disable the context help icon |
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92 | self.setWindowFlags(self.windowFlags() & ~QtCore.Qt.WindowContextHelpButtonHint) |
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93 | |
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94 | self.setupModel() |
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95 | self.setupMapper() |
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96 | |
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97 | def _getOutputs(self): |
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98 | return { |
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99 | MODEL.NEUTRON_SLD_REAL: self.ui.editNeutronSldReal, |
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100 | MODEL.NEUTRON_SLD_IMAG: self.ui.editNeutronSldImag, |
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101 | MODEL.XRAY_SLD_REAL: self.ui.editXraySldReal, |
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102 | MODEL.XRAY_SLD_IMAG: self.ui.editXraySldImag, |
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103 | MODEL.NEUTRON_INC_XS: self.ui.editNeutronIncXs, |
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104 | MODEL.NEUTRON_ABS_XS: self.ui.editNeutronAbsXs, |
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105 | MODEL.NEUTRON_LENGTH: self.ui.editNeutronLength |
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106 | } |
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107 | |
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108 | def setupUi(self): |
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109 | self.ui = Ui_SldPanel() |
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110 | self.ui.setupUi(self) |
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111 | |
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112 | # set validators |
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113 | # TODO: GuiUtils.FormulaValidator() crashes with Qt5 - fix |
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114 | #self.ui.editMolecularFormula.setValidator(GuiUtils.FormulaValidator(self.ui.editMolecularFormula)) |
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115 | |
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116 | rx = QtCore.QRegExp("[+\-]?(?:0|[1-9]\d*)(?:\.\d*)?(?:[eE][+\-]?\d+)?") |
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117 | self.ui.editMassDensity.setValidator(QtGui.QRegExpValidator(rx, self.ui.editMassDensity)) |
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118 | self.ui.editNeutronWavelength.setValidator(QtGui.QRegExpValidator(rx, self.ui.editNeutronWavelength)) |
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119 | self.ui.editXrayWavelength.setValidator(QtGui.QRegExpValidator(rx, self.ui.editXrayWavelength)) |
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120 | |
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121 | # signals |
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122 | self.ui.helpButton.clicked.connect(self.displayHelp) |
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123 | self.ui.closeButton.clicked.connect(self.closePanel) |
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124 | self.ui.recalculateButton.clicked.connect(self.calculateSLD) |
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125 | |
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126 | def calculateSLD(self): |
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127 | self.recalculateSLD() |
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128 | |
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129 | def setupModel(self): |
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130 | self.model = QtGui.QStandardItemModel(self) |
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131 | self.model.setItem(MODEL.MOLECULAR_FORMULA , QtGui.QStandardItem()) |
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132 | self.model.setItem(MODEL.MASS_DENSITY , QtGui.QStandardItem()) |
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133 | self.model.setItem(MODEL.NEUTRON_WAVELENGTH, QtGui.QStandardItem()) |
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134 | self.model.setItem(MODEL.XRAY_WAVELENGTH , QtGui.QStandardItem()) |
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135 | |
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136 | for key in list(self._getOutputs().keys()): |
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137 | self.model.setItem(key, QtGui.QStandardItem()) |
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138 | |
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139 | self.model.dataChanged.connect(self.dataChanged) |
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140 | |
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141 | self.ui.editMassDensity.textChanged.connect(self.recalculateSLD) |
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142 | self.ui.editMolecularFormula.textChanged.connect(self.recalculateSLD) |
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143 | self.ui.editNeutronWavelength.textChanged.connect(self.recalculateSLD) |
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144 | self.ui.editXrayWavelength.textChanged.connect(self.recalculateSLD) |
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145 | |
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146 | self.modelReset() |
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147 | |
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148 | def setupMapper(self): |
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149 | self.mapper = QtWidgets.QDataWidgetMapper(self) |
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150 | self.mapper.setModel(self.model) |
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151 | self.mapper.setOrientation(QtCore.Qt.Vertical) |
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152 | self.mapper.addMapping(self.ui.editMolecularFormula , MODEL.MOLECULAR_FORMULA) |
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153 | self.mapper.addMapping(self.ui.editMassDensity , MODEL.MASS_DENSITY) |
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154 | self.mapper.addMapping(self.ui.editNeutronWavelength, MODEL.NEUTRON_WAVELENGTH) |
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155 | self.mapper.addMapping(self.ui.editXrayWavelength , MODEL.XRAY_WAVELENGTH) |
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156 | |
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157 | for key, edit in self._getOutputs().items(): |
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158 | self.mapper.addMapping(edit, key) |
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159 | |
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160 | self.mapper.toFirst() |
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161 | |
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162 | def dataChanged(self, top, bottom): |
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163 | update = False |
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164 | for index in range(top.row(), bottom.row() + 1): |
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165 | if (index == MODEL.MOLECULAR_FORMULA) or (index == MODEL.MASS_DENSITY) or (index == MODEL.NEUTRON_WAVELENGTH) or (index == MODEL.XRAY_WAVELENGTH): |
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166 | update = True |
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167 | |
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168 | # calculation |
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169 | if update: |
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170 | self.recalculateSLD() |
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171 | |
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172 | def recalculateSLD(self): |
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173 | formula = self.ui.editMolecularFormula.text() |
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174 | density = self.ui.editMassDensity.text() |
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175 | neutronWavelength = self.ui.editNeutronWavelength.text() |
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176 | xrayWavelength = self.ui.editXrayWavelength.text() |
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177 | |
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178 | if len(formula) > 0 and len(density) > 0 and len(neutronWavelength) > 0 and len(xrayWavelength) > 0: |
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179 | try: |
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180 | results = sldAlgorithm(str(formula), float(density), float(neutronWavelength), float(xrayWavelength)) |
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181 | |
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182 | def format(value): |
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183 | return ("%-5.3g" % value).strip() |
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184 | |
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185 | self.model.item(MODEL.NEUTRON_SLD_REAL).setText(format(results.neutron_sld_real)) |
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186 | self.model.item(MODEL.NEUTRON_SLD_IMAG).setText(format(results.neutron_sld_imag)) |
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187 | |
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188 | self.model.item(MODEL.XRAY_SLD_REAL).setText(format(results.xray_sld_real)) |
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189 | self.model.item(MODEL.XRAY_SLD_IMAG).setText(format(results.xray_sld_imag)) |
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190 | |
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191 | self.model.item(MODEL.NEUTRON_INC_XS).setText(format(results.neutron_inc_xs)) |
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192 | self.model.item(MODEL.NEUTRON_ABS_XS).setText(format(results.neutron_abs_xs)) |
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193 | self.model.item(MODEL.NEUTRON_LENGTH).setText(format(results.neutron_length)) |
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194 | |
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195 | return |
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196 | |
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197 | except Exception as e: |
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198 | pass |
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199 | |
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200 | for key in list(self._getOutputs().keys()): |
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201 | self.model.item(key).setText("") |
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202 | |
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203 | def modelReset(self): |
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204 | #self.model.beginResetModel() |
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205 | try: |
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206 | self.model.item(MODEL.MOLECULAR_FORMULA ).setText("H2O") |
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207 | self.model.item(MODEL.MASS_DENSITY ).setText("1.0") |
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208 | self.model.item(MODEL.NEUTRON_WAVELENGTH).setText("6.0") |
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209 | self.model.item(MODEL.XRAY_WAVELENGTH ).setText("1.0") |
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210 | self.recalculateSLD() |
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211 | finally: |
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212 | pass |
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213 | #self.model.endResetModel() |
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214 | |
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215 | def displayHelp(self): |
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216 | location = "/user/qtgui/Calculators/sld_calculator_help.html" |
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217 | self.manager.showHelp(location) |
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218 | |
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219 | |
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220 | def closePanel(self): |
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221 | """ |
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222 | close the window containing this panel |
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223 | """ |
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224 | self.close() |
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225 | |
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