source: sasview/setup.py @ e5ea2d0

ESS_GUIESS_GUI_DocsESS_GUI_batch_fittingESS_GUI_bumps_abstractionESS_GUI_iss1116ESS_GUI_iss879ESS_GUI_iss959ESS_GUI_openclESS_GUI_orderingESS_GUI_sync_sascalccostrafo411magnetic_scattrelease-4.1.1release-4.1.2release-4.2.2release_4.0.1ticket-1009ticket-1094-headlessticket-1242-2d-resolutionticket-1243ticket-1249ticket885unittest-saveload
Last change on this file since e5ea2d0 was e5ea2d0, checked in by ajj, 3 years ago

Merge branch 'master' into sasmodels-integration

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Line 
1"""
2    Setup for SasView
3    #TODO: Add checks to see that all the dependencies are on the system
4"""
5import sys
6import os
7from setuptools import setup, Extension
8from distutils.command.build_ext import build_ext
9from distutils.core import Command
10
11try:
12    from numpy.distutils.misc_util import get_numpy_include_dirs
13    NUMPY_INC = get_numpy_include_dirs()[0]
14except:
15    try:
16        import numpy
17        NUMPY_INC = os.path.join(os.path.split(numpy.__file__)[0], 
18                                 "core","include")
19    except:
20        msg = "\nNumpy is needed to build SasView. "
21        print msg, "Try easy_install numpy.\n  %s" % str(sys.exc_value)
22        sys.exit(0)
23
24# Manage version number ######################################
25import sasview
26VERSION = sasview.__version__
27##############################################################
28
29package_dir = {}
30package_data = {}
31packages = []
32ext_modules = []
33
34# Remove all files that should be updated by this setup
35# We do this here because application updates these files from .sasview
36# except when there is no such file
37# Todo : make this list generic
38plugin_model_list = ['polynominal5.py', 'sph_bessel_jn.py', 
39                     'sum_Ap1_1_Ap2.py', 'sum_p1_p2.py', 
40                     'testmodel_2.py', 'testmodel.py',
41                     'polynominal5.pyc', 'sph_bessel_jn.pyc', 
42                     'sum_Ap1_1_Ap2.pyc', 'sum_p1_p2.pyc', 
43                     'testmodel_2.pyc', 'testmodel.pyc', 'plugins.log']
44sas_dir = os.path.join(os.path.expanduser("~"),'.sasview')
45if os.path.isdir(sas_dir):
46    f_path = os.path.join(sas_dir, "sasview.log")
47    if os.path.isfile(f_path):
48        os.remove(f_path)
49    f_path = os.path.join(sas_dir, "serialized_cat.json")
50    if os.path.isfile(f_path):
51        os.remove(f_path)
52    f_path = os.path.join(sas_dir, 'config', "custom_config.py")
53    if os.path.isfile(f_path):
54        os.remove(f_path)
55    f_path = os.path.join(sas_dir, 'plugin_models')
56    if os.path.isdir(f_path):
57        for f in os.listdir(f_path): 
58            if f in plugin_model_list:
59                file_path =  os.path.join(f_path, f)
60                os.remove(file_path)
61                   
62# 'sys.maxsize' and 64bit: Not supported for python2.5
63is_64bits = False
64if sys.version_info >= (2, 6):
65    is_64bits = sys.maxsize > 2**32
66   
67enable_openmp = False
68
69if sys.platform =='darwin':
70    if not is_64bits:
71        # Disable OpenMP
72        enable_openmp = False
73    else:
74        # Newer versions of Darwin don't support openmp
75        try:
76            darwin_ver = int(os.uname()[2].split('.')[0])
77            if darwin_ver >= 12:
78                enable_openmp = False
79        except:
80            print "PROBLEM determining Darwin version"
81
82# Options to enable OpenMP
83copt =  {'msvc': ['/openmp'],
84         'mingw32' : ['-fopenmp'],
85         'unix' : ['-fopenmp']}
86lopt =  {'msvc': ['/MANIFEST'],
87         'mingw32' : ['-fopenmp'],
88         'unix' : ['-lgomp']}
89
90# Platform-specific link options
91platform_lopt = {'msvc' : ['/MANIFEST']}
92platform_copt = {}
93
94# Set copts to get compile working on OS X >= 10.9 using clang
95if sys.platform =='darwin':
96    try:
97        darwin_ver = int(os.uname()[2].split('.')[0])
98        if darwin_ver >= 13 and darwin_ver < 14:
99            platform_copt = {'unix' : ['-Wno-error=unused-command-line-argument-hard-error-in-future']}
100    except:
101        print "PROBLEM determining Darwin version"
102
103class DisableOpenMPCommand(Command):
104    description = "The version of MinGW that comes with Anaconda does not come with OpenMP :( "\
105                  "This commands means we can turn off compiling with OpenMP for this or any "\
106                  "other reason."
107    user_options = []
108
109    def initialize_options(self):
110        self.cwd = None
111
112    def finalize_options(self):
113        self.cwd = os.getcwd()
114        global enable_openmp
115        enable_openmp = False
116
117    def run(self):
118        pass
119
120class build_ext_subclass( build_ext ):
121    def build_extensions(self):
122        # Get 64-bitness
123        c = self.compiler.compiler_type
124        print "Compiling with %s (64bit=%s)" % (c, str(is_64bits))
125       
126        # OpenMP build options
127        if enable_openmp:
128            if copt.has_key(c):
129                for e in self.extensions:
130                    e.extra_compile_args = copt[ c ]
131            if lopt.has_key(c):
132                for e in self.extensions:
133                    e.extra_link_args = lopt[ c ]
134                   
135        # Platform-specific build options
136        if platform_lopt.has_key(c):
137            for e in self.extensions:
138                e.extra_link_args = platform_lopt[ c ]
139
140        if platform_copt.has_key(c):
141            for e in self.extensions:
142                e.extra_compile_args = platform_copt[ c ]
143
144
145        build_ext.build_extensions(self)
146
147class BuildSphinxCommand(Command):
148    description = "Build Sphinx documentation."
149    user_options = []
150
151    def initialize_options(self):
152        self.cwd = None
153
154    def finalize_options(self):
155        self.cwd = os.getcwd()
156
157    def run(self):
158        sys.path.append("docs/sphinx-docs")
159        import build_sphinx
160        build_sphinx.rebuild()
161
162# sas module
163package_dir["sas"] = os.path.join("src", "sas")
164packages.append("sas")
165
166# sas module
167package_dir["sas.sasgui"] = os.path.join("src", "sas", "sasgui")
168packages.append("sas.sasgui")
169
170# sas module
171package_dir["sas.sascalc"] = os.path.join("src", "sas", "sascalc")
172packages.append("sas.sascalc")
173
174# sas.sascalc.invariant
175package_dir["sas.sascalc.invariant"] = os.path.join("src", "sas", "sascalc", "invariant")
176packages.extend(["sas.sascalc.invariant"])
177
178# sas.sasgui.guiframe
179guiframe_path = os.path.join("src", "sas", "sasgui", "guiframe")
180package_dir["sas.sasgui.guiframe"] = guiframe_path
181package_dir["sas.sasgui.guiframe.local_perspectives"] = os.path.join(os.path.join(guiframe_path, "local_perspectives"))
182package_data["sas.sasgui.guiframe"] = ['images/*', 'media/*']
183packages.extend(["sas.sasgui.guiframe", "sas.sasgui.guiframe.local_perspectives"])
184# build local plugin
185for d in os.listdir(os.path.join(guiframe_path, "local_perspectives")):
186    if d not in ['.svn','__init__.py', '__init__.pyc']:
187        package_name = "sas.sasgui.guiframe.local_perspectives." + d
188        packages.append(package_name)
189        package_dir[package_name] = os.path.join(guiframe_path, "local_perspectives", d)
190
191# sas.sascalc.dataloader
192package_dir["sas.sascalc.dataloader"] = os.path.join("src", "sas", "sascalc", "dataloader")
193package_data["sas.sascalc.dataloader.readers"] = ['defaults.json','schema/*.xsd']
194packages.extend(["sas.sascalc.dataloader","sas.sascalc.dataloader.readers","sas.sascalc.dataloader.readers.schema"])
195
196# sas.sascalc.calculator
197package_dir["sas.sascalc.calculator"] =os.path.join("src", "sas", "sascalc", "calculator")
198packages.extend(["sas.sascalc.calculator"])
199   
200# sas.sascalc.pr
201numpy_incl_path = os.path.join(NUMPY_INC, "numpy")
202srcdir  = os.path.join("src", "sas", "sascalc", "pr", "c_extensions")
203package_dir["sas.sascalc.pr.core"] = srcdir
204package_dir["sas.sascalc.pr"] = os.path.join("src","sas", "sascalc", "pr")
205packages.extend(["sas.sascalc.pr","sas.sascalc.pr.core"])
206ext_modules.append( Extension("sas.sascalc.pr.core.pr_inversion",
207                              sources = [os.path.join(srcdir, "Cinvertor.c"),
208                                         os.path.join(srcdir, "invertor.c"),
209                                         ],
210                              include_dirs=[numpy_incl_path],
211                              ) )
212       
213# sas.sascalc.fit
214package_dir["sas.sascalc.fit"] = os.path.join("src", "sas", "sascalc", "fit")
215packages.append("sas.sascalc.fit")
216
217# Perspectives
218package_dir["sas.sasgui.perspectives"] = os.path.join("src", "sas", "sasgui", "perspectives")
219package_dir["sas.sasgui.perspectives.pr"] = os.path.join("src", "sas", "sasgui", "perspectives", "pr")
220packages.extend(["sas.sasgui.perspectives","sas.sasgui.perspectives.pr"])
221package_data["sas.sasgui.perspectives.pr"] = ['images/*']
222
223package_dir["sas.sasgui.perspectives.invariant"] = os.path.join("src", "sas", "sasgui", "perspectives", "invariant")
224packages.extend(["sas.sasgui.perspectives.invariant"])
225package_data['sas.sasgui.perspectives.invariant'] = [os.path.join("media",'*')]
226
227package_dir["sas.sasgui.perspectives.fitting"] = os.path.join("src", "sas", "sasgui", "perspectives", "fitting")
228package_dir["sas.sasgui.perspectives.fitting.plugin_models"] = os.path.join("src", "sas", "sasgui", "perspectives", "fitting", "plugin_models")
229packages.extend(["sas.sasgui.perspectives.fitting", 
230                 "sas.sasgui.perspectives.fitting.plugin_models"])
231package_data['sas.sasgui.perspectives.fitting'] = ['media/*','plugin_models/*']
232
233packages.extend(["sas.sasgui.perspectives", "sas.sasgui.perspectives.calculator"])   
234package_data['sas.sasgui.perspectives.calculator'] = ['images/*', 'media/*']
235   
236# Data util
237package_dir["sas.sascalc.data_util"] = os.path.join("src", "sas", "sascalc", "data_util")
238packages.append("sas.sascalc.data_util")
239
240# Plottools
241package_dir["sas.sasgui.plottools"] = os.path.join("src", "sas", "sasgui", "plottools")
242packages.append("sas.sasgui.plottools")
243
244# sas models
245includedir  = os.path.join("src", "sas", "models", "include")
246igordir = os.path.join("src", "sas", "models", "c_extension", "libigor")
247cephes_dir = os.path.join("src", "sas", "models", "c_extension", "cephes")
248c_model_dir = os.path.join("src", "sas", "models", "c_extension", "c_models")
249smear_dir  = os.path.join("src", "sas", "models", "c_extension", "c_smearer")
250gen_dir  = os.path.join("src", "sas", "models", "c_extension", "c_gen")
251wrapper_dir  = os.path.join("src", "sas", "models", "c_extension", "python_wrapper", "generated")
252model_dir = os.path.join("src", "sas","models")
253
254#if os.path.isdir(wrapper_dir):
255#    for file in os.listdir(wrapper_dir):
256#        file_path =  os.path.join(wrapper_dir, file)
257#        os.remove(file_path)
258#else:
259#    os.makedirs(wrapper_dir)
260#sys.path.append(os.path.join("src", "sas", "models", "c_extension", "python_wrapper"))
261#from wrapping import generate_wrappers
262#generate_wrappers(header_dir = includedir,
263#                  output_dir = model_dir,
264#                  c_wrapper_dir = wrapper_dir)
265
266IGNORED_FILES = [".svn"]
267if not os.name=='nt':
268    IGNORED_FILES.extend(["gamma_win.c","winFuncs.c"])
269
270EXTENSIONS = [".c", ".cpp"]
271
272def append_file(file_list, dir_path):
273    """
274    Add sources file to sources
275    """
276    for f in os.listdir(dir_path):
277        if os.path.isfile(os.path.join(dir_path, f)):
278            _, ext = os.path.splitext(f)
279            if ext.lower() in EXTENSIONS and f not in IGNORED_FILES:
280                file_list.append(os.path.join(dir_path, f)) 
281        elif os.path.isdir(os.path.join(dir_path, f)) and \
282                not f.startswith("."):
283            sub_dir = os.path.join(dir_path, f)
284            for new_f in os.listdir(sub_dir):
285                if os.path.isfile(os.path.join(sub_dir, new_f)):
286                    _, ext = os.path.splitext(new_f)
287                    if ext.lower() in EXTENSIONS and\
288                         new_f not in IGNORED_FILES:
289                        file_list.append(os.path.join(sub_dir, new_f)) 
290       
291model_sources = []
292append_file(file_list=model_sources, dir_path=igordir)
293#append_file(file_list=model_sources, dir_path=c_model_dir)
294#append_file(file_list=model_sources, dir_path=wrapper_dir)
295
296smear_sources = []
297append_file(file_list=smear_sources, dir_path=smear_dir)
298       
299package_dir["sas.models"] = model_dir
300package_dir["sas.models.sas_extension"] = os.path.join("src", "sas", "models", "sas_extension")
301package_data['sas.models'] = [os.path.join('media', "*.*")]
302package_data['sas.models'] += [os.path.join('media','img', "*.*")]
303packages.extend(["sas.models","sas.models.sas_extension"])
304   
305smearer_sources = [os.path.join(smear_dir, "smearer.cpp"),
306                  os.path.join(smear_dir, "smearer_module.cpp")]
307geni_sources = [os.path.join(gen_dir, "sld2i_module.cpp")]
308if os.name=='nt':
309    smearer_sources.append(os.path.join(igordir, "winFuncs.c"))
310    geni_sources.append(os.path.join(igordir, "winFuncs.c"))
311
312c_models = [ 
313    #Extension("sas.models.sas_extension.c_models",
314    #    sources=model_sources,
315    #    include_dirs=[
316    #        igordir, includedir, c_model_dir, numpy_incl_path, cephes_dir
317    #    ],
318    #),
319
320    # Smearer extension
321    Extension("sas.models.sas_extension.smearer",
322        sources = smearer_sources,
323        include_dirs=[igordir,  smear_dir, numpy_incl_path],
324    ),
325                   
326    Extension("sas.models.sas_extension.smearer2d_helper",
327        sources = [
328            os.path.join(smear_dir, "smearer2d_helper_module.cpp"),
329            os.path.join(smear_dir, "smearer2d_helper.cpp"),
330            os.path.join(igordir, "winFuncs.c"),
331        ],
332        include_dirs=[smear_dir, numpy_incl_path],
333    ),
334                   
335    Extension("sas.models.sas_extension.sld2i",
336        sources = [
337            os.path.join(gen_dir, "sld2i_module.cpp"),
338            os.path.join(gen_dir, "sld2i.cpp"),
339            os.path.join(c_model_dir, "libfunc.c"),
340            os.path.join(c_model_dir, "librefl.c"),
341            os.path.join(igordir, "winFuncs.c"),
342        ],
343        include_dirs=[gen_dir, includedir,  c_model_dir, numpy_incl_path],
344    ),
345]
346
347# Comment out the following to avoid rebuilding all the models
348ext_modules.extend(c_models)
349
350packages.append("sas.models")
351# SasView
352
353package_dir["sas.sasview"] = "sasview"
354package_data['sas.sasview'] = ['images/*', 
355                               'media/*',
356                               'test/*.txt',
357                               'test/1d_data/*',
358                               'test/2d_data/*',
359                               'test/save_states/*',
360                               'test/upcoming_formats/*', 
361                                 'default_categories.json']
362packages.append("sas.sasview")
363
364required = [
365    'bumps>=0.7.5.6', 'periodictable>=1.3.1', 'pyparsing<2.0.0',
366
367    # 'lxml>=2.2.2',
368    'lxml', 
369
370    ## The following dependecies won't install automatically, so assume them
371    ## The numbers should be bumped up for matplotlib and wxPython as well.
372    # 'numpy>=1.4.1', 'scipy>=0.7.2', 'matplotlib>=0.99.1.1',
373    # 'wxPython>=2.8.11', 'pil',
374    ]
375
376if os.name=='nt':
377    required.extend(['html5lib', 'reportlab'])
378else:
379    required.extend(['pil'])
380   
381# Set up SasView   
382setup(
383    name="sasview",
384    version = VERSION,
385    description = "SasView application",
386    author = "SasView Team",
387    author_email = "developers@sasview.org",
388    url = "http://sasview.org",
389    license = "PSF",
390    keywords = "small-angle x-ray and neutron scattering analysis",
391    download_url = "https://github.com/SasView/sasview.git",
392    package_dir = package_dir,
393    packages = packages,
394    package_data = package_data,
395    ext_modules = ext_modules,
396    install_requires = required,
397    zip_safe = False,
398    entry_points = {
399                    'console_scripts':[
400                                       "sasview = sas.sasview.sasview:run",
401                                       ]
402                    },
403    cmdclass = {'build_ext': build_ext_subclass,
404                'docs': BuildSphinxCommand,
405                'disable_openmp': DisableOpenMPCommand}
406    )   
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