""" Setup for SasView #TODO: Add checks to see that all the dependencies are on the system """ import sys import os from setuptools import setup, Extension from distutils.command.build_ext import build_ext from distutils.core import Command sys.path.append("docs/sphinx-docs") import build_sphinx try: from numpy.distutils.misc_util import get_numpy_include_dirs NUMPY_INC = get_numpy_include_dirs()[0] except: try: import numpy NUMPY_INC = os.path.join(os.path.split(numpy.__file__)[0], "core","include") except: msg = "\nNumpy is needed to build SasView. " print msg, "Try easy_install numpy.\n %s" % str(sys.exc_value) sys.exit(0) # Manage version number ###################################### import sasview VERSION = sasview.__version__ ############################################################## package_dir = {} package_data = {} packages = [] ext_modules = [] # Remove all files that should be updated by this setup # We do this here because application updates these files from .sasview # except when there is no such file # Todo : make this list generic plugin_model_list = ['polynominal5.py', 'sph_bessel_jn.py', 'sum_Ap1_1_Ap2.py', 'sum_p1_p2.py', 'testmodel_2.py', 'testmodel.py', 'polynominal5.pyc', 'sph_bessel_jn.pyc', 'sum_Ap1_1_Ap2.pyc', 'sum_p1_p2.pyc', 'testmodel_2.pyc', 'testmodel.pyc', 'plugins.log'] sas_dir = os.path.join(os.path.expanduser("~"),'.sasview') if os.path.isdir(sas_dir): f_path = os.path.join(sas_dir, "sasview.log") if os.path.isfile(f_path): os.remove(f_path) f_path = os.path.join(sas_dir, "serialized_cat.json") if os.path.isfile(f_path): os.remove(f_path) f_path = os.path.join(sas_dir, 'config', "custom_config.py") if os.path.isfile(f_path): os.remove(f_path) f_path = os.path.join(sas_dir, 'plugin_models') if os.path.isdir(f_path): for f in os.listdir(f_path): if f in plugin_model_list: file_path = os.path.join(f_path, f) os.remove(file_path) # 'sys.maxsize' and 64bit: Not supported for python2.5 is_64bits = False if sys.version_info >= (2, 6): is_64bits = sys.maxsize > 2**32 enable_openmp = False if sys.platform =='darwin': if not is_64bits: # Disable OpenMP enable_openmp = False else: # Newer versions of Darwin don't support openmp try: darwin_ver = int(os.uname()[2].split('.')[0]) if darwin_ver >= 12: enable_openmp = False except: print "PROBLEM determining Darwin version" # Options to enable OpenMP copt = {'msvc': ['/openmp'], 'mingw32' : ['-fopenmp'], 'unix' : ['-fopenmp']} lopt = {'msvc': ['/MANIFEST'], 'mingw32' : ['-fopenmp'], 'unix' : ['-lgomp']} # Platform-specific link options platform_lopt = {'msvc' : ['/MANIFEST']} platform_copt = {} # Set copts to get compile working on OS X >= 10.9 using clang if sys.platform =='darwin': try: darwin_ver = int(os.uname()[2].split('.')[0]) if darwin_ver >= 13: platform_copt = {'unix' : ['-Wno-error=unused-command-line-argument-hard-error-in-future']} except: print "PROBLEM determining Darwin version" class DisableOpenMPCommand(Command): description = "The version of MinGW that comes with Anaconda does not come with OpenMP :( "\ "This commands means we can turn off compiling with OpenMP for this or any "\ "other reason." user_options = [] def initialize_options(self): self.cwd = None def finalize_options(self): self.cwd = os.getcwd() global enable_openmp enable_openmp = False def run(self): pass class build_ext_subclass( build_ext ): def build_extensions(self): # Get 64-bitness c = self.compiler.compiler_type print "Compiling with %s (64bit=%s)" % (c, str(is_64bits)) # OpenMP build options if enable_openmp: if copt.has_key(c): for e in self.extensions: e.extra_compile_args = copt[ c ] if lopt.has_key(c): for e in self.extensions: e.extra_link_args = lopt[ c ] # Platform-specific build options if platform_lopt.has_key(c): for e in self.extensions: e.extra_link_args = platform_lopt[ c ] if platform_copt.has_key(c): for e in self.extensions: e.extra_compile_args = platform_copt[ c ] build_ext.build_extensions(self) class BuildSphinxCommand(Command): description = "Build Sphinx documentation." user_options = [] def initialize_options(self): self.cwd = None def finalize_options(self): self.cwd = os.getcwd() def run(self): build_sphinx.clean() build_sphinx.retrieve_user_docs() build_sphinx.apidoc() build_sphinx.build() # sas module package_dir["sas"] = os.path.join("src", "sas") packages.append("sas") # sas.invariant package_dir["sas.invariant"] = os.path.join("src", "sas", "invariant") packages.extend(["sas.invariant"]) # sas.guiframe guiframe_path = os.path.join("src", "sas", "guiframe") package_dir["sas.guiframe"] = guiframe_path package_dir["sas.guiframe.local_perspectives"] = os.path.join(os.path.join(guiframe_path, "local_perspectives")) package_data["sas.guiframe"] = ['images/*', 'media/*'] packages.extend(["sas.guiframe", "sas.guiframe.local_perspectives"]) # build local plugin for d in os.listdir(os.path.join(guiframe_path, "local_perspectives")): if d not in ['.svn','__init__.py', '__init__.pyc']: package_name = "sas.guiframe.local_perspectives." + d packages.append(package_name) package_dir[package_name] = os.path.join(guiframe_path, "local_perspectives", d) # sas.dataloader package_dir["sas.dataloader"] = os.path.join("src", "sas", "dataloader") package_data["sas.dataloader.readers"] = ['defaults.xml','schema/*.xsd'] packages.extend(["sas.dataloader","sas.dataloader.readers","sas.dataloader.readers.schema"]) # sas.calculator package_dir["sas.calculator"] =os.path.join("src", "sas", "calculator") packages.extend(["sas.calculator"]) # sas.pr numpy_incl_path = os.path.join(NUMPY_INC, "numpy") srcdir = os.path.join("src", "sas", "pr", "c_extensions") package_dir["sas.pr.core"] = srcdir package_dir["sas.pr"] = os.path.join("src","sas", "pr") packages.extend(["sas.pr","sas.pr.core"]) ext_modules.append( Extension("sas.pr.core.pr_inversion", sources = [os.path.join(srcdir, "Cinvertor.c"), os.path.join(srcdir, "invertor.c"), ], include_dirs=[numpy_incl_path], ) ) # sas.fit (park integration) package_dir["sas.fit"] = os.path.join("src", "sas", "fit") packages.append("sas.fit") # Perspectives package_dir["sas.perspectives"] = os.path.join("src", "sas", "perspectives") package_dir["sas.perspectives.pr"] = os.path.join("src", "sas", "perspectives", "pr") packages.extend(["sas.perspectives","sas.perspectives.pr"]) package_data["sas.perspectives.pr"] = ['images/*'] package_dir["sas.perspectives.invariant"] = os.path.join("src", "sas", "perspectives", "invariant") packages.extend(["sas.perspectives.invariant"]) package_data['sas.perspectives.invariant'] = [os.path.join("media",'*')] package_dir["sas.perspectives.fitting"] = os.path.join("src", "sas", "perspectives", "fitting") package_dir["sas.perspectives.fitting.plugin_models"] = os.path.join("src", "sas", "perspectives", "fitting", "plugin_models") packages.extend(["sas.perspectives.fitting", "sas.perspectives.fitting.plugin_models"]) package_data['sas.perspectives.fitting'] = ['media/*','plugin_models/*'] packages.extend(["sas.perspectives", "sas.perspectives.calculator"]) package_data['sas.perspectives.calculator'] = ['images/*', 'media/*'] # Data util package_dir["data_util"] = os.path.join("src", "sas", "data_util") packages.append("sas.data_util") # Plottools package_dir["sas.plottools"] = os.path.join("src", "sas", "plottools") packages.append("sas.plottools") # Park 1.2.1 package_dir["park"]="park-1.2.1/park" packages.extend(["park"]) package_data["park"] = ['park-1.2.1/*.txt', 'park-1.2.1/park.epydoc'] ext_modules.append( Extension("park._modeling", sources = [ os.path.join("park-1.2.1", "park", "lib", "modeling.cc"), os.path.join("park-1.2.1", "park", "lib", "resolution.c"), ], ) ) # sas models includedir = os.path.join("src", "sas", "models", "include") igordir = os.path.join("src", "sas", "models", "c_extension", "libigor") cephes_dir = os.path.join("src", "sas", "models", "c_extension", "cephes") c_model_dir = os.path.join("src", "sas", "models", "c_extension", "c_models") smear_dir = os.path.join("src", "sas", "models", "c_extension", "c_smearer") gen_dir = os.path.join("src", "sas", "models", "c_extension", "c_gen") wrapper_dir = os.path.join("src", "sas", "models", "c_extension", "python_wrapper", "generated") model_dir = os.path.join("src", "sas","models") if os.path.isdir(wrapper_dir): for file in os.listdir(wrapper_dir): file_path = os.path.join(wrapper_dir, file) os.remove(file_path) else: os.makedirs(wrapper_dir) sys.path.append(os.path.join("src", "sas", "models", "c_extension", "python_wrapper")) from wrapping import generate_wrappers generate_wrappers(header_dir = includedir, output_dir = model_dir, c_wrapper_dir = wrapper_dir) IGNORED_FILES = [".svn"] if not os.name=='nt': IGNORED_FILES.extend(["gamma_win.c","winFuncs.c"]) EXTENSIONS = [".c", ".cpp"] def append_file(file_list, dir_path): """ Add sources file to sources """ for f in os.listdir(dir_path): if os.path.isfile(os.path.join(dir_path, f)): _, ext = os.path.splitext(f) if ext.lower() in EXTENSIONS and f not in IGNORED_FILES: file_list.append(os.path.join(dir_path, f)) elif os.path.isdir(os.path.join(dir_path, f)) and \ not f.startswith("."): sub_dir = os.path.join(dir_path, f) for new_f in os.listdir(sub_dir): if os.path.isfile(os.path.join(sub_dir, new_f)): _, ext = os.path.splitext(new_f) if ext.lower() in EXTENSIONS and\ new_f not in IGNORED_FILES: file_list.append(os.path.join(sub_dir, new_f)) model_sources = [] append_file(file_list=model_sources, dir_path=igordir) append_file(file_list=model_sources, dir_path=c_model_dir) append_file(file_list=model_sources, dir_path=wrapper_dir) smear_sources = [] append_file(file_list=smear_sources, dir_path=smear_dir) package_dir["sas.models"] = model_dir package_dir["sas.models.sas_extension"] = os.path.join("src", "sas", "models", "sas_extension") package_data['sas.models'] = [os.path.join('media', "*.*")] package_data['sas.models'] += [os.path.join('media','img', "*.*")] packages.extend(["sas.models","sas.models.sas_extension"]) smearer_sources = [os.path.join(smear_dir, "smearer.cpp"), os.path.join(smear_dir, "smearer_module.cpp")] geni_sources = [os.path.join(gen_dir, "sld2i_module.cpp")] if os.name=='nt': smearer_sources.append(os.path.join(igordir, "winFuncs.c")) geni_sources.append(os.path.join(igordir, "winFuncs.c")) c_models = [ Extension("sas.models.sas_extension.c_models", sources=model_sources, include_dirs=[ igordir, includedir, c_model_dir, numpy_incl_path, cephes_dir ], ), # Smearer extension Extension("sas.models.sas_extension.smearer", sources = smearer_sources, include_dirs=[igordir, smear_dir, numpy_incl_path], ), Extension("sas.models.sas_extension.smearer2d_helper", sources = [ os.path.join(smear_dir, "smearer2d_helper_module.cpp"), os.path.join(smear_dir, "smearer2d_helper.cpp"), os.path.join(igordir, "winFuncs.c"), ], include_dirs=[smear_dir, numpy_incl_path], ), Extension("sas.models.sas_extension.sld2i", sources = [ os.path.join(gen_dir, "sld2i_module.cpp"), os.path.join(gen_dir, "sld2i.cpp"), os.path.join(c_model_dir, "libfunc.c"), os.path.join(c_model_dir, "librefl.c"), os.path.join(igordir, "winFuncs.c"), ], include_dirs=[gen_dir, includedir, c_model_dir, numpy_incl_path], ), ] # Comment out the following to avoid rebuilding all the models ext_modules.extend(c_models) # SasView package_dir["sas.sasview"] = "sasview" package_data['sas.sasview'] = ['images/*', 'media/*', 'test/*', 'default_categories.json'] packages.append("sas.sasview") required = [ 'bumps>=0.7.5.4', 'periodictable>=1.3.1', 'pyparsing<2.0.0', # 'lxml>=2.2.2', 'lxml', ## The following dependecies won't install automatically, so assume them ## The numbers should be bumped up for matplotlib and wxPython as well. # 'numpy>=1.4.1', 'scipy>=0.7.2', 'matplotlib>=0.99.1.1', # 'wxPython>=2.8.11', 'pil', ] if os.name=='nt': required.extend(['html5lib', 'reportlab']) else: required.extend(['pil']) # Set up SasView setup( name="sasview", version = VERSION, description = "SasView application", author = "University of Tennessee", author_email = "sansdanse@gmail.com", url = "http://sasview.org", license = "PSF", keywords = "small-angle x-ray and neutron scattering analysis", download_url = "https://sourceforge.net/projects/sansviewproject/files/", package_dir = package_dir, packages = packages, package_data = package_data, ext_modules = ext_modules, install_requires = required, zip_safe = False, entry_points = { 'console_scripts':[ "sasview = sas.sasview.sasview:run", ] }, cmdclass = {'build_ext': build_ext_subclass, 'docs': BuildSphinxCommand, 'disable_openmp': DisableOpenMPCommand} )