source: sasview/setup.py @ d7bb526

ESS_GUIESS_GUI_DocsESS_GUI_batch_fittingESS_GUI_bumps_abstractionESS_GUI_iss1116ESS_GUI_iss879ESS_GUI_iss959ESS_GUI_openclESS_GUI_orderingESS_GUI_sync_sascalccostrafo411magnetic_scattrelease-4.1.1release-4.1.2release-4.2.2release_4.0.1ticket-1009ticket-1094-headlessticket-1242-2d-resolutionticket-1243ticket-1249ticket885unittest-saveload
Last change on this file since d7bb526 was d7bb526, checked in by Piotr Rozyczko <piotr.rozyczko@…>, 4 years ago

Refactored plottools into sasgui

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[d6bc28cf]1"""
[c329f4d]2    Setup for SasView
[d6bc28cf]3    #TODO: Add checks to see that all the dependencies are on the system
4"""
[8ab3302]5import sys
[d6bc28cf]6import os
[5980b1a]7from setuptools import setup, Extension
[2cef9d3]8from distutils.command.build_ext import build_ext
[968aa6e]9from distutils.core import Command
10
[e13ef7f]11try:
12    from numpy.distutils.misc_util import get_numpy_include_dirs
13    NUMPY_INC = get_numpy_include_dirs()[0]
14except:
[cb5fb4a]15    try:
[e13ef7f]16        import numpy
[8ab3302]17        NUMPY_INC = os.path.join(os.path.split(numpy.__file__)[0], 
18                                 "core","include")
[cb5fb4a]19    except:
[c329f4d]20        msg = "\nNumpy is needed to build SasView. "
[8ab3302]21        print msg, "Try easy_install numpy.\n  %s" % str(sys.exc_value)
[e13ef7f]22        sys.exit(0)
[d6bc28cf]23
[5548954]24# Manage version number ######################################
[3a39c2e]25import sasview
26VERSION = sasview.__version__
[5548954]27##############################################################
28
[d6bc28cf]29package_dir = {}
30package_data = {}
31packages = []
32ext_modules = []
33
[8ab3302]34# Remove all files that should be updated by this setup
[3a39c2e]35# We do this here because application updates these files from .sasview
[8ab3302]36# except when there is no such file
37# Todo : make this list generic
38plugin_model_list = ['polynominal5.py', 'sph_bessel_jn.py', 
39                     'sum_Ap1_1_Ap2.py', 'sum_p1_p2.py', 
[b30ed8f]40                     'testmodel_2.py', 'testmodel.py',
41                     'polynominal5.pyc', 'sph_bessel_jn.pyc', 
42                     'sum_Ap1_1_Ap2.pyc', 'sum_p1_p2.pyc', 
[eb32080e]43                     'testmodel_2.pyc', 'testmodel.pyc', 'plugins.log']
[3a39c2e]44sas_dir = os.path.join(os.path.expanduser("~"),'.sasview')
45if os.path.isdir(sas_dir):
46    f_path = os.path.join(sas_dir, "sasview.log")
[e615a0d]47    if os.path.isfile(f_path):
48        os.remove(f_path)
[3a39c2e]49    f_path = os.path.join(sas_dir, "serialized_cat.json")
[ea5fa58]50    if os.path.isfile(f_path):
51        os.remove(f_path)
[3a39c2e]52    f_path = os.path.join(sas_dir, 'config', "custom_config.py")
[e615a0d]53    if os.path.isfile(f_path):
54        os.remove(f_path)
[3a39c2e]55    f_path = os.path.join(sas_dir, 'plugin_models')
[e615a0d]56    if os.path.isdir(f_path):
[5980b1a]57        for f in os.listdir(f_path): 
58            if f in plugin_model_list:
59                file_path =  os.path.join(f_path, f)
[e615a0d]60                os.remove(file_path)
61                   
62# 'sys.maxsize' and 64bit: Not supported for python2.5
63is_64bits = False
64if sys.version_info >= (2, 6):
65    is_64bits = sys.maxsize > 2**32
66   
[7a04dbb]67enable_openmp = False
[e79a467]68
[f468791]69if sys.platform =='darwin':
70    if not is_64bits:
71        # Disable OpenMP
72        enable_openmp = False
73    else:
74        # Newer versions of Darwin don't support openmp
75        try:
76            darwin_ver = int(os.uname()[2].split('.')[0])
77            if darwin_ver >= 12:
78                enable_openmp = False
79        except:
80            print "PROBLEM determining Darwin version"
[b30ed8f]81
82# Options to enable OpenMP
83copt =  {'msvc': ['/openmp'],
84         'mingw32' : ['-fopenmp'],
85         'unix' : ['-fopenmp']}
86lopt =  {'msvc': ['/MANIFEST'],
87         'mingw32' : ['-fopenmp'],
88         'unix' : ['-lgomp']}
[13f00a0]89
[ebdb833]90# Platform-specific link options
91platform_lopt = {'msvc' : ['/MANIFEST']}
[307fa4f]92platform_copt = {}
[b9c8fc5]93
94# Set copts to get compile working on OS X >= 10.9 using clang
95if sys.platform =='darwin':
96    try:
97        darwin_ver = int(os.uname()[2].split('.')[0])
98        if darwin_ver >= 13:
99            platform_copt = {'unix' : ['-Wno-error=unused-command-line-argument-hard-error-in-future']}
100    except:
101        print "PROBLEM determining Darwin version"
102
[5972029]103class DisableOpenMPCommand(Command):
104    description = "The version of MinGW that comes with Anaconda does not come with OpenMP :( "\
105                  "This commands means we can turn off compiling with OpenMP for this or any "\
106                  "other reason."
107    user_options = []
108
109    def initialize_options(self):
110        self.cwd = None
111
112    def finalize_options(self):
113        self.cwd = os.getcwd()
114        global enable_openmp
115        enable_openmp = False
[1829835]116
[5972029]117    def run(self):
118        pass
[ebdb833]119
[13f00a0]120class build_ext_subclass( build_ext ):
121    def build_extensions(self):
122        # Get 64-bitness
123        c = self.compiler.compiler_type
124        print "Compiling with %s (64bit=%s)" % (c, str(is_64bits))
125       
[ebdb833]126        # OpenMP build options
[b30ed8f]127        if enable_openmp:
[13f00a0]128            if copt.has_key(c):
[5980b1a]129                for e in self.extensions:
130                    e.extra_compile_args = copt[ c ]
[13f00a0]131            if lopt.has_key(c):
132                for e in self.extensions:
133                    e.extra_link_args = lopt[ c ]
134                   
[ebdb833]135        # Platform-specific build options
136        if platform_lopt.has_key(c):
137            for e in self.extensions:
138                e.extra_link_args = platform_lopt[ c ]
139
[1829835]140        if platform_copt.has_key(c):
141            for e in self.extensions:
142                e.extra_compile_args = platform_copt[ c ]
143
144
[13f00a0]145        build_ext.build_extensions(self)
[d6bc28cf]146
[968aa6e]147class BuildSphinxCommand(Command):
148    description = "Build Sphinx documentation."
149    user_options = []
150
151    def initialize_options(self):
152        self.cwd = None
153
154    def finalize_options(self):
155        self.cwd = os.getcwd()
156
[d8c4019]157    def run(self):
158        sys.path.append("docs/sphinx-docs")
159        import build_sphinx
[c2ee2b1]160        build_sphinx.rebuild()
[968aa6e]161
[3a39c2e]162# sas module
163package_dir["sas"] = os.path.join("src", "sas")
164packages.append("sas")
[29e96f3]165
[3a39c2e]166# sas.invariant
[b699768]167package_dir["sas.invariant"] = os.path.join("src", "sas", "sascalc", "invariant")
[3a39c2e]168packages.extend(["sas.invariant"])
[d6bc28cf]169
[3a39c2e]170# sas.guiframe
171guiframe_path = os.path.join("src", "sas", "guiframe")
172package_dir["sas.guiframe"] = guiframe_path
173package_dir["sas.guiframe.local_perspectives"] = os.path.join(os.path.join(guiframe_path, "local_perspectives"))
174package_data["sas.guiframe"] = ['images/*', 'media/*']
175packages.extend(["sas.guiframe", "sas.guiframe.local_perspectives"])
[d6bc28cf]176# build local plugin
[5980b1a]177for d in os.listdir(os.path.join(guiframe_path, "local_perspectives")):
178    if d not in ['.svn','__init__.py', '__init__.pyc']:
[3a39c2e]179        package_name = "sas.guiframe.local_perspectives." + d
[3d24489]180        packages.append(package_name)
[5980b1a]181        package_dir[package_name] = os.path.join(guiframe_path, "local_perspectives", d)
[d6bc28cf]182
[3a39c2e]183# sas.dataloader
[b699768]184package_dir["sas.dataloader"] = os.path.join("src", "sas", "sascalc", "dataloader")
[25f223b]185package_data["sas.dataloader.readers"] = ['defaults.json','schema/*.xsd']
[3a39c2e]186packages.extend(["sas.dataloader","sas.dataloader.readers","sas.dataloader.readers.schema"])
[d6bc28cf]187
[3a39c2e]188# sas.calculator
[b699768]189package_dir["sas.calculator"] =os.path.join("src", "sas", "sascalc", "calculator")
190packages.extend(["sas.sascalc.calculator"])
[d6bc28cf]191   
[b699768]192# sas.sascalc.pr
[cb5fb4a]193numpy_incl_path = os.path.join(NUMPY_INC, "numpy")
[b699768]194srcdir  = os.path.join("src", "sas", "sascalc", "pr", "c_extensions")
195package_dir["sas.sascalc.pr.core"] = srcdir
196package_dir["sas.sascalc.pr"] = os.path.join("src","sas", "sascalc", "pr")
197packages.extend(["sas.sascalc.pr","sas.sascalc.pr.core"])
198ext_modules.append( Extension("sas.sascalc.pr.core.pr_inversion",
[3d24489]199                              sources = [os.path.join(srcdir, "Cinvertor.c"),
[29e96f3]200                                         os.path.join(srcdir, "invertor.c"),
201                                         ],
202                              include_dirs=[numpy_incl_path],
203                              ) )
[d6bc28cf]204       
[b699768]205# sas.sascalc.fit
206package_dir["sas.sascalc.fit"] = os.path.join("src", "sas", "sascalc", "fit")
207packages.append("sas.sascalc.fit")
[3d24489]208
209# Perspectives
[3a39c2e]210package_dir["sas.perspectives"] = os.path.join("src", "sas", "perspectives")
211package_dir["sas.perspectives.pr"] = os.path.join("src", "sas", "perspectives", "pr")
212packages.extend(["sas.perspectives","sas.perspectives.pr"])
213package_data["sas.perspectives.pr"] = ['images/*']
214
215package_dir["sas.perspectives.invariant"] = os.path.join("src", "sas", "perspectives", "invariant")
216packages.extend(["sas.perspectives.invariant"])
217package_data['sas.perspectives.invariant'] = [os.path.join("media",'*')]
218
219package_dir["sas.perspectives.fitting"] = os.path.join("src", "sas", "perspectives", "fitting")
220package_dir["sas.perspectives.fitting.plugin_models"] = os.path.join("src", "sas", "perspectives", "fitting", "plugin_models")
221packages.extend(["sas.perspectives.fitting", 
222                 "sas.perspectives.fitting.plugin_models"])
223package_data['sas.perspectives.fitting'] = ['media/*','plugin_models/*']
224
225packages.extend(["sas.perspectives", "sas.perspectives.calculator"])   
226package_data['sas.perspectives.calculator'] = ['images/*', 'media/*']
[3d24489]227   
[d6bc28cf]228# Data util
[b699768]229package_dir["data_util"] = os.path.join("src", "sas", "sascalc", "data_util")
230packages.append("sas.sascalc.data_util")
[d6bc28cf]231
232# Plottools
[d7bb526]233package_dir["sas.sasgui.plottools"] = os.path.join("src", "sas", "sasgui", "plottools")
234packages.append("sas.sasgui.plottools")
[d6bc28cf]235
[3a39c2e]236# sas models
237includedir  = os.path.join("src", "sas", "models", "include")
238igordir = os.path.join("src", "sas", "models", "c_extension", "libigor")
239cephes_dir = os.path.join("src", "sas", "models", "c_extension", "cephes")
240c_model_dir = os.path.join("src", "sas", "models", "c_extension", "c_models")
241smear_dir  = os.path.join("src", "sas", "models", "c_extension", "c_smearer")
242gen_dir  = os.path.join("src", "sas", "models", "c_extension", "c_gen")
243wrapper_dir  = os.path.join("src", "sas", "models", "c_extension", "python_wrapper", "generated")
244model_dir = os.path.join("src", "sas","models")
[082c565]245
[78f74bd7]246if os.path.isdir(wrapper_dir):
247    for file in os.listdir(wrapper_dir): 
248        file_path =  os.path.join(wrapper_dir, file)
249        os.remove(file_path)
250else:
[0ba3b08]251    os.makedirs(wrapper_dir)
[3a39c2e]252sys.path.append(os.path.join("src", "sas", "models", "c_extension", "python_wrapper"))
[3d24489]253from wrapping import generate_wrappers
254generate_wrappers(header_dir = includedir, 
255                  output_dir = model_dir,
256                  c_wrapper_dir = wrapper_dir)
[2d1b700]257
[101065a]258IGNORED_FILES = [".svn"]
[9cde4cc]259if not os.name=='nt':
[2c63e80e]260    IGNORED_FILES.extend(["gamma_win.c","winFuncs.c"])
[9cde4cc]261
[d6bc28cf]262EXTENSIONS = [".c", ".cpp"]
263
264def append_file(file_list, dir_path):
265    """
266    Add sources file to sources
267    """
268    for f in os.listdir(dir_path):
269        if os.path.isfile(os.path.join(dir_path, f)):
270            _, ext = os.path.splitext(f)
271            if ext.lower() in EXTENSIONS and f not in IGNORED_FILES:
272                file_list.append(os.path.join(dir_path, f)) 
273        elif os.path.isdir(os.path.join(dir_path, f)) and \
274                not f.startswith("."):
275            sub_dir = os.path.join(dir_path, f)
276            for new_f in os.listdir(sub_dir):
277                if os.path.isfile(os.path.join(sub_dir, new_f)):
278                    _, ext = os.path.splitext(new_f)
279                    if ext.lower() in EXTENSIONS and\
280                         new_f not in IGNORED_FILES:
281                        file_list.append(os.path.join(sub_dir, new_f)) 
282       
283model_sources = []
284append_file(file_list=model_sources, dir_path=igordir)
285append_file(file_list=model_sources, dir_path=c_model_dir)
[67424cd]286append_file(file_list=model_sources, dir_path=wrapper_dir)
287
[d6bc28cf]288smear_sources = []
289append_file(file_list=smear_sources, dir_path=smear_dir)
290       
[3a39c2e]291package_dir["sas.models"] = model_dir
292package_dir["sas.models.sas_extension"] = os.path.join("src", "sas", "models", "sas_extension")
293package_data['sas.models'] = [os.path.join('media', "*.*")]
294package_data['sas.models'] += [os.path.join('media','img', "*.*")]
295packages.extend(["sas.models","sas.models.sas_extension"])
[5980b1a]296   
297smearer_sources = [os.path.join(smear_dir, "smearer.cpp"),
298                  os.path.join(smear_dir, "smearer_module.cpp")]
299geni_sources = [os.path.join(gen_dir, "sld2i_module.cpp")]
300if os.name=='nt':
301    smearer_sources.append(os.path.join(igordir, "winFuncs.c"))
302    geni_sources.append(os.path.join(igordir, "winFuncs.c"))
[820df88]303
304c_models = [ 
[3a39c2e]305    Extension("sas.models.sas_extension.c_models",
[820df88]306        sources=model_sources,                 
307        include_dirs=[
308            igordir, includedir, c_model_dir, numpy_incl_path, cephes_dir
309        ],
310    ),
311
312    # Smearer extension
[3a39c2e]313    Extension("sas.models.sas_extension.smearer",
[820df88]314        sources = smearer_sources,
315        include_dirs=[igordir,  smear_dir, numpy_incl_path],
316    ),
[5980b1a]317                   
[3a39c2e]318    Extension("sas.models.sas_extension.smearer2d_helper",
[820df88]319        sources = [
320            os.path.join(smear_dir, "smearer2d_helper_module.cpp"),
321            os.path.join(smear_dir, "smearer2d_helper.cpp"),
[a6d2e3b]322            os.path.join(igordir, "winFuncs.c"),
[820df88]323        ],
324        include_dirs=[smear_dir, numpy_incl_path],
325    ),
[5980b1a]326                   
[3a39c2e]327    Extension("sas.models.sas_extension.sld2i",
[820df88]328        sources = [
329            os.path.join(gen_dir, "sld2i_module.cpp"),
330            os.path.join(gen_dir, "sld2i.cpp"),
331            os.path.join(c_model_dir, "libfunc.c"),
332            os.path.join(c_model_dir, "librefl.c"),
[a6d2e3b]333            os.path.join(igordir, "winFuncs.c"),
[820df88]334        ],
335        include_dirs=[gen_dir, includedir,  c_model_dir, numpy_incl_path],
336    ),
337]
338
339# Comment out the following to avoid rebuilding all the models
340ext_modules.extend(c_models)
341
[c329f4d]342# SasView
[df7a7e3]343
[3a39c2e]344package_dir["sas.sasview"] = "sasview"
[bbb8a56]345package_data['sas.sasview'] = ['images/*', 
346                               'media/*',
[d4c88e24]347                               'test/*.txt',
[bbb8a56]348                               'test/1d_data/*',
349                               'test/2d_data/*',
350                               'test/save_states/*',
351                               'test/upcoming_formats/*', 
352                               'default_categories.json']
[3a39c2e]353packages.append("sas.sasview")
[d6bc28cf]354
[9f32c57]355required = [
[9d5427f]356    'bumps>=0.7.5.6', 'periodictable>=1.3.1', 'pyparsing<2.0.0',
[9f32c57]357
358    # 'lxml>=2.2.2',
359    'lxml', 
360
361    ## The following dependecies won't install automatically, so assume them
362    ## The numbers should be bumped up for matplotlib and wxPython as well.
363    # 'numpy>=1.4.1', 'scipy>=0.7.2', 'matplotlib>=0.99.1.1',
364    # 'wxPython>=2.8.11', 'pil',
365    ]
[213b445]366
[95fe70d]367if os.name=='nt':
[7a211030]368    required.extend(['html5lib', 'reportlab'])
[7f59928e]369else:
[202c1ef]370    required.extend(['pil'])
[30ad350]371   
[5980b1a]372# Set up SasView   
[d6bc28cf]373setup(
[c329f4d]374    name="sasview",
[5548954]375    version = VERSION,
[c329f4d]376    description = "SasView application",
[038ccfe6]377    author = "SasView Team",
378    author_email = "developers@sasview.org",
[5980b1a]379    url = "http://sasview.org",
[d6bc28cf]380    license = "PSF",
[c329f4d]381    keywords = "small-angle x-ray and neutron scattering analysis",
[038ccfe6]382    download_url = "https://github.com/SasView/sasview.git",
[d6bc28cf]383    package_dir = package_dir,
384    packages = packages,
385    package_data = package_data,
386    ext_modules = ext_modules,
387    install_requires = required,
[60f7d19]388    zip_safe = False,
[a7b774d]389    entry_points = {
390                    'console_scripts':[
[3a39c2e]391                                       "sasview = sas.sasview.sasview:run",
[a7b774d]392                                       ]
[13f00a0]393                    },
[968aa6e]394    cmdclass = {'build_ext': build_ext_subclass,
[5972029]395                'docs': BuildSphinxCommand,
396                'disable_openmp': DisableOpenMPCommand}
[d113531]397    )   
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