source: sasview/sasview/test/media/testdata_help.rst @ da456fb

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Last change on this file since da456fb was da456fb, checked in by smk78, 8 years ago

Major updating of the test data documentation. Closes #710

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[e5160aa]1.. testdata_help.rst
2
3Test Data
4=========
5
6Test data sets are included as a convenience to our users. Look in the \test
7sub-folder in your SasView installation folder.
8
[da456fb]9The test data sets are organized based on their data structure:
[e5160aa]10
[da456fb]11- *1D data*
12- *2D data*
13- *coordinate data*
14- *image data*
15- *SESANS data*
16- *save states*
17- *upcoming formats*
[e5160aa]18
[da456fb]19.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
[e5160aa]20
[da456fb]211D Data
22^^^^^^^
231D data sets EITHER have:
[e5160aa]24
[da456fb]25- at least two columns of data with I(Q) (assumed to be in absolute units) on the y-axis and Q on the x-axis. And additional columns of data may carry uncertainty data, resolution data, or other metadata.
[a32aa3e]26
[da456fb]27OR:
28
29- the I(Q) and Q data in separate files *with no other information*.
30
31Data in the latter format need to be converted to a single file format with the :ref:`File_Converter_Tool` before they can be analysed in SasView.
[e5160aa]32
[0d10aab]331D Test Data
[da456fb]34............
3533837rear_1D_1.75_16.5
36  - Data from a magnetically-oriented surfactant liquid crystal output by the Mantid framework. The data was collected on the SANS2D instrument at ISIS.
[0d10aab]37
[da456fb]3810wtAOT_Reline_120_reduced / Anton-Paar_PDH / saxsess_example
39  - Data from Anton-Paar SAXSess instruments saved in Otto Glatter's PDH format.
40 
[0d10aab]41AOT_Microemulsion
42  - Aerosol-OT surfactant stabilised oil-in-water microemulsion data at three
43    contrasts: core (oil core), drop (oil core + surfactant layer), and shell
44    (surfactant layer).
45  - Suitable for testing simultaneous fitting.
[da456fb]46
47APS_DND-CAT
48  - ASCII data from the DND-CAT beamline at the APS.
49
50APS_X / APS_Y
51  - ASCII data output by a reduction software package at the APS.
52  - Suitable for testing the :ref:`File_Converter_Tool` .
53
54FIT2D_I / FIT2D_Q
55  - ASCII data output by the FIT2D software package at the ESRF.
56  - Suitable for testing the :ref:`File_Converter_Tool` .
57
[0d10aab]58hSDS_D2O
59  - h25-sodium dodecyl sulphate solutions at two concentrations: 0.5wt% (just
60    above the cmc), 2wt% (well above the cmc), and 2wt% but with 0.2mM NaCl
61    electrolyte.
62  - Suitable for testing charged S(Q) models.
63
[da456fb]64ISIS_83404 / ISIS_98929
65  - Polyamide-6 fibres hydrated in D2O exhibiting a broad lamellar peak from the semi-crystalline nanostructure.
66  - This is the *same data* as that in Z8300* / Z9800* but in an amalgamated ASCII format!
67  - Suitable for testing :ref:`Correlation_Function_Analysis` .
[0d10aab]68
69ISIS_Polymer_Blend_TK49
70  - Monodisperse (Mw/Mn~1.02) 49wt% d8-polystyrene : 51wt% h8-polystyrene
71    polymer blend.
72  - Suitable for testing Poly_GaussCoil and RPA10 models.
73
[da456fb]74P123_D2O
75  - Lyotropic liquid crystalline solutions of non-ionic ABA block copolymer
76    Pluronic P123 in water at three concentrations: 10wt%, 30wt%, and 40wt%.
77  - Suitable for testing paracrystal models.
78
79Z8300*.I1D / Z8300*.QAX / Z9800*.I1D / Z9800*.QAX
80  - BSL/OTOKO data from polyamide-6 fibres hydrated in D2O exhibiting a broad lamellar peak from the semi-crystalline nanostructure.
81  - This is the *same data* as that in ISIS_83404 / ISIS_98929 but in an older separated format!
82  - Suitable for testing the :ref:`File_Converter_Tool` .
83  - Suitable for testing :ref:`Correlation_Function_Analysis` .
84
[0d10aab]85.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
86
[da456fb]872D Data
88^^^^^^^
892D data sets are data sets that give the reduced intensity for each Qx-Qy bin. Depending on the file format, uncertainty data and metadata may also be available.
90
[0d10aab]912D Test Data
[da456fb]92............
9333837rear_2D_1.75_16.5
94  - Data from a magnetically-oriented surfactant liquid crystal output by the Mantid framework. The data was collected on the SANS2D instrument at ISIS.
[0d10aab]95
96P123_D2O
97  - Lyotropic liquid crystalline solutions of non-ionic ABA block copolymer
98    Pluronic P123 in water at three concentrations: 10wt%, 30wt%, and 40wt%.
99  - Suitable for testing paracrystal models.
100
101.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
102
[da456fb]103Coordinate Data
104^^^^^^^^^^^^^^^
105Coordinate data sets, such as PDB or OMF files, and which describe a specific structure, are designed to be read and viewed in the :ref:`SANS_Calculator_Tool` .
[0d10aab]106
[da456fb]107Coordinate Test Data
108....................
109A_Raw_Example-1
110  - OMF format data file from a simulation of magnetic spheres.
[0d10aab]111
[da456fb]112diamond
113  - PDB format data file for diamond.
[0d10aab]114
[da456fb]115dna
116  - PDB format data file for DNA.
[0d10aab]117
[da456fb]118sld_file
119  - Example SLD format data file.
[0d10aab]120
[da456fb]121.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
[0d10aab]122
[da456fb]123Image Data
124^^^^^^^^^^
125Image data sets are designed to be read by the :ref:`Image_Viewer_Tool` . They can be converted into synthetic 2D data.
126
127Image Test Data
128...............
129ISIS_98940
130  - Polyamide-6 fibres hydrated in D2O exhibiting a broad lamellar peak from the semi-crystalline nanostructure.
131  - Data is presented in Windows Bitmap (BMP), GIF, JPEG (JPG), PNG, and TIFF (TIF) formats.
132
133.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
134
135SESANS Data
136^^^^^^^^^^^
137SESANS (Spin-Echo SANS) data sets primarily contain the neutron polarisation as a function of the spin-echo length. Also see :ref:`SESANS` .
138
139SESANS Test Data
140................
141spheres2micron
142  - SESANS data from 2 micron polystyrene spheres in 53% H2O / 47% D2O.
143
144.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
145
146Save States
147^^^^^^^^^^^
148Saved states are projects and analyses saved by the SasView program. A single
149analysis file contains the data and parameters for a single fit (.fit), p(r)
150inversion (.prv), or invariant calculation (.inv). A project file (.svs) contains
151the results for every active analysis in a SasView session.
[0d10aab]152
[da456fb]153Saved State Test Data
154.....................
155fitstate.fitv
156  - a saved fitting analysis.
[0d10aab]157
158test.inv
[da456fb]159  - a saved invariant analysis.
[0d10aab]160
161test002.inv
[da456fb]162  - a saved invariant analysis.
163
164prstate.prv
165  - a saved P(r) analysis.
166
167newone.svs
168  - a saved SasView project.
169
170.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
171
172Upcoming Formats
173^^^^^^^^^^^^^^^^
174Data in this folder are in formats that are not yet implemented in SasView but which might be in future versions of the program.
[0d10aab]175
176.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
177
178Other Test Data
179^^^^^^^^^^^^^^^
[da456fb]180phi_weights.txt
[0d10aab]181
[da456fb]182radius_dist.txt
[0d10aab]183
[da456fb]184THETA_weights.txt
[0d10aab]185
186.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
187
[da456fb]188.. note::  This help document was last changed by Steve King, 06Oct2016
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