import time import numpy import copy import math import sys import wx from data_util.calcthread import CalcThread from sans.fit.AbstractFitEngine import FitData2D, FitData1D, SansAssembly class CalcChisqr1D(CalcThread): """ Compute chisqr """ def __init__(self, data1d, model, smearer=None, qmin=None, qmax=None, completefn = None, updatefn = None, yieldtime = 0.01, worktime = 0.01 ): CalcThread.__init__(self,completefn, updatefn, yieldtime, worktime) if model ==None or data1d ==None: raise ValueError, "Need data and model to compute chisqr" if data1d.__class__.__name__ !="Data1D": msg= str(data1d.__class__.__name__) raise ValueError, "need Data1D to compute chisqr. Current class %s"%msg self.fitdata= FitData1D(x=data1d.x,y=data1d.y,dx=data1d.dx,dy=data1d.dy, smearer=smearer) self.fitdata.setFitRange(qmin=qmin,qmax=qmax) self.model = model self.starttime = 0 def isquit(self): """ @raise KeyboardInterrupt: when the thread is interrupted """ try: CalcThread.isquit(self) except KeyboardInterrupt: raise KeyboardInterrupt def compute(self): """ Compute the data given a model function """ self.starttime = time.time() output= None res=[] try: res = self.fitdata.residuals(self.model.evalDistribution) sum=0 for item in res: # Check whether we need to bail out self.isquit() if numpy.isfinite(item): sum +=item*item if len(res)>0: output = sum/ len(res) elapsed = time.time()-self.starttime self.complete(output= output, elapsed=elapsed) except KeyboardInterrupt: # Thread was interrupted, just proceed and re-raise. # Real code should not print, but this is an example... raise class CalcChisqr2D(CalcThread): """ Compute chisqr """ def __init__(self,data2d, model, qmin, qmax, completefn = None, updatefn = None, yieldtime = 0.01, worktime = 0.01 ): CalcThread.__init__(self,completefn, updatefn, yieldtime, worktime) if model ==None or data2d ==None: raise ValueError, "Need data and model to compute chisqr" if data2d.__class__.__name__ !="Data2D": msg= str(data2d.__class__.__name__) raise ValueError, "need Data2D to compute chisqr. Current class %s"%msg self.fitdata = FitData2D(sans_data2d=data2d ,data=data2d.data, err_data=data2d.err_data) self.fitdata.setFitRange(qmin=qmin,qmax=qmax) self.model = model self.starttime = 0 def isquit(self): """ @raise KeyboardInterrupt: when the thread is interrupted """ try: CalcThread.isquit(self) except KeyboardInterrupt: raise KeyboardInterrupt def compute(self): """ Compute the data given a model function """ self.starttime = time.time() output= None res=[] try: res = self.fitdata.residuals(self.model.evalDistribution) sum=0 for item in res: # Check whether we need to bail out self.isquit() if numpy.isfinite(item): sum +=item*item if len(res)>0: output = sum/ len(res) elapsed = time.time()-self.starttime self.complete(output= output, elapsed=elapsed) except KeyboardInterrupt: # Thread was interrupted, just proceed and re-raise. # Real code should not print, but this is an example... raise