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| 51 | <h1>Source code for sas.models.SphereSLDModel</h1><div class="highlight"><pre> |
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| 52 | <span class="c">##############################################################################</span> |
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| 53 | <span class="c"># This software was developed by the University of Tennessee as part of the</span> |
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| 54 | <span class="c"># Distributed Data Analysis of Neutron Scattering Experiments (DANSE)</span> |
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| 55 | <span class="c"># project funded by the US National Science Foundation.</span> |
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| 56 | <span class="c">#</span> |
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| 57 | <span class="c"># If you use DANSE applications to do scientific research that leads to</span> |
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| 58 | <span class="c"># publication, we ask that you acknowledge the use of the software with the</span> |
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| 59 | <span class="c"># following sentence:</span> |
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| 60 | <span class="c">#</span> |
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| 61 | <span class="c"># This work benefited from DANSE software developed under NSF award DMR-0520547</span> |
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| 62 | <span class="c">#</span> |
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| 63 | <span class="c"># Copyright 2008-2011, University of Tennessee</span> |
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| 64 | <span class="c">##############################################################################</span> |
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| 65 | |
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| 66 | <span class="sd">""" </span> |
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| 67 | <span class="sd">Provide functionality for a C extension model</span> |
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| 68 | |
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| 69 | <span class="sd">.. WARNING::</span> |
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| 70 | |
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| 71 | <span class="sd"> THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY</span> |
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| 72 | <span class="sd"> DO NOT MODIFY THIS FILE, MODIFY</span> |
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| 73 | <span class="sd"> src/sas/models/include/spheresld.h</span> |
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| 74 | <span class="sd"> AND RE-RUN THE GENERATOR SCRIPT</span> |
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| 75 | <span class="sd">"""</span> |
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| 76 | |
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| 77 | <span class="kn">from</span> <span class="nn">sas.models.BaseComponent</span> <span class="kn">import</span> <span class="n">BaseComponent</span> |
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| 78 | <span class="kn">from</span> <span class="nn">sas.models.sas_extension.c_models</span> <span class="kn">import</span> <span class="n">CSphereSLDModel</span> |
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| 79 | |
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| 80 | <div class="viewcode-block" id="create_SphereSLDModel"><a class="viewcode-back" href="../../../dev/api/sas.models.html#sas.models.SphereSLDModel.create_SphereSLDModel">[docs]</a><span class="k">def</span> <span class="nf">create_SphereSLDModel</span><span class="p">():</span> |
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| 81 | <span class="sd">"""</span> |
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| 82 | <span class="sd"> Create a model instance</span> |
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| 83 | <span class="sd"> """</span> |
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| 84 | <span class="n">obj</span> <span class="o">=</span> <span class="n">SphereSLDModel</span><span class="p">()</span> |
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| 85 | <span class="c"># CSphereSLDModel.__init__(obj) is called by</span> |
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| 86 | <span class="c"># the SphereSLDModel constructor</span> |
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| 87 | <span class="k">return</span> <span class="n">obj</span> |
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| 88 | </div> |
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| 89 | <div class="viewcode-block" id="SphereSLDModel"><a class="viewcode-back" href="../../../dev/api/sas.models.html#sas.models.SphereSLDModel.SphereSLDModel">[docs]</a><span class="k">class</span> <span class="nc">SphereSLDModel</span><span class="p">(</span><span class="n">CSphereSLDModel</span><span class="p">,</span> <span class="n">BaseComponent</span><span class="p">):</span> |
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| 90 | <span class="sd">""" </span> |
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| 91 | <span class="sd"> Class that evaluates a SphereSLDModel model. </span> |
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| 92 | <span class="sd"> This file was auto-generated from src/sas/models/include/spheresld.h.</span> |
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| 93 | <span class="sd"> Refer to that file and the structure it contains</span> |
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| 94 | <span class="sd"> for details of the model.</span> |
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| 95 | <span class="sd"> </span> |
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| 96 | <span class="sd"> List of default parameters:</span> |
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| 97 | |
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| 98 | <span class="sd"> * n_shells = 1.0 </span> |
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| 99 | <span class="sd"> * scale = 1.0 </span> |
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| 100 | <span class="sd"> * thick_inter0 = 50.0 [A]</span> |
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| 101 | <span class="sd"> * func_inter0 = 0.0 </span> |
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| 102 | <span class="sd"> * sld_core0 = 2.07e-06 [1/A^(2)]</span> |
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| 103 | <span class="sd"> * sld_solv = 1e-06 [1/A^(2)]</span> |
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| 104 | <span class="sd"> * background = 0.0 </span> |
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| 105 | <span class="sd"> * sld_flat1 = 4e-06 [1/A^(2)]</span> |
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| 106 | <span class="sd"> * sld_flat2 = 3.5e-06 [1/A^(2)]</span> |
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| 107 | <span class="sd"> * sld_flat3 = 4e-06 [1/A^(2)]</span> |
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| 108 | <span class="sd"> * sld_flat4 = 3.5e-06 [1/A^(2)]</span> |
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| 109 | <span class="sd"> * sld_flat5 = 4e-06 [1/A^(2)]</span> |
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| 110 | <span class="sd"> * sld_flat6 = 3.5e-06 [1/A^(2)]</span> |
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| 111 | <span class="sd"> * sld_flat7 = 4e-06 [1/A^(2)]</span> |
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| 112 | <span class="sd"> * sld_flat8 = 3.5e-06 [1/A^(2)]</span> |
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| 113 | <span class="sd"> * sld_flat9 = 4e-06 [1/A^(2)]</span> |
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| 114 | <span class="sd"> * sld_flat10 = 3.5e-06 [1/A^(2)]</span> |
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| 115 | <span class="sd"> * thick_inter1 = 50.0 [A]</span> |
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| 116 | <span class="sd"> * thick_inter2 = 50.0 [A]</span> |
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| 117 | <span class="sd"> * thick_inter3 = 50.0 [A]</span> |
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| 118 | <span class="sd"> * thick_inter4 = 50.0 [A]</span> |
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| 119 | <span class="sd"> * thick_inter5 = 50.0 [A]</span> |
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| 120 | <span class="sd"> * thick_inter6 = 50.0 [A]</span> |
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| 121 | <span class="sd"> * thick_inter7 = 50.0 [A]</span> |
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| 122 | <span class="sd"> * thick_inter8 = 50.0 [A]</span> |
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| 123 | <span class="sd"> * thick_inter9 = 50.0 [A]</span> |
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| 124 | <span class="sd"> * thick_inter10 = 50.0 [A]</span> |
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| 125 | <span class="sd"> * thick_flat1 = 100.0 [A]</span> |
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| 126 | <span class="sd"> * thick_flat2 = 100.0 [A]</span> |
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| 127 | <span class="sd"> * thick_flat3 = 100.0 [A]</span> |
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| 128 | <span class="sd"> * thick_flat4 = 100.0 [A]</span> |
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| 129 | <span class="sd"> * thick_flat5 = 100.0 [A]</span> |
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| 130 | <span class="sd"> * thick_flat6 = 100.0 [A]</span> |
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| 131 | <span class="sd"> * thick_flat7 = 100.0 [A]</span> |
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| 132 | <span class="sd"> * thick_flat8 = 100.0 [A]</span> |
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| 133 | <span class="sd"> * thick_flat9 = 100.0 [A]</span> |
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| 134 | <span class="sd"> * thick_flat10 = 100.0 [A]</span> |
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| 135 | <span class="sd"> * func_inter1 = 0.0 </span> |
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| 136 | <span class="sd"> * func_inter2 = 0.0 </span> |
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| 137 | <span class="sd"> * func_inter3 = 0.0 </span> |
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| 138 | <span class="sd"> * func_inter4 = 0.0 </span> |
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| 139 | <span class="sd"> * func_inter5 = 0.0 </span> |
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| 140 | <span class="sd"> * func_inter6 = 0.0 </span> |
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| 141 | <span class="sd"> * func_inter7 = 0.0 </span> |
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| 142 | <span class="sd"> * func_inter8 = 0.0 </span> |
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| 143 | <span class="sd"> * func_inter9 = 0.0 </span> |
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| 144 | <span class="sd"> * func_inter10 = 0.0 </span> |
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| 145 | <span class="sd"> * nu_inter1 = 2.5 </span> |
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| 146 | <span class="sd"> * nu_inter2 = 2.5 </span> |
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| 147 | <span class="sd"> * nu_inter3 = 2.5 </span> |
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| 148 | <span class="sd"> * nu_inter4 = 2.5 </span> |
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| 149 | <span class="sd"> * nu_inter5 = 2.5 </span> |
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| 150 | <span class="sd"> * nu_inter6 = 2.5 </span> |
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| 151 | <span class="sd"> * nu_inter7 = 2.5 </span> |
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| 152 | <span class="sd"> * nu_inter8 = 2.5 </span> |
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| 153 | <span class="sd"> * nu_inter9 = 2.5 </span> |
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| 154 | <span class="sd"> * nu_inter10 = 2.5 </span> |
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| 155 | <span class="sd"> * npts_inter = 35.0 </span> |
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| 156 | <span class="sd"> * nu_inter0 = 2.5 </span> |
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| 157 | <span class="sd"> * rad_core0 = 50.0 [A]</span> |
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| 158 | |
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| 159 | <span class="sd"> """</span> |
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| 160 | |
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| 161 | <span class="k">def</span> <span class="nf">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">multfactor</span><span class="o">=</span><span class="mi">1</span><span class="p">):</span> |
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| 162 | <span class="sd">""" Initialization """</span> |
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| 163 | <span class="bp">self</span><span class="o">.</span><span class="n">__dict__</span> <span class="o">=</span> <span class="p">{}</span> |
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| 164 | |
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| 165 | <span class="c"># Initialize BaseComponent first, then sphere</span> |
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| 166 | <span class="n">BaseComponent</span><span class="o">.</span><span class="n">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">)</span> |
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| 167 | <span class="c">#apply(CSphereSLDModel.__init__, (self,)) </span> |
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| 168 | |
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| 169 | <span class="n">CSphereSLDModel</span><span class="o">.</span><span class="n">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">)</span> |
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| 170 | <span class="bp">self</span><span class="o">.</span><span class="n">is_multifunc</span> <span class="o">=</span> <span class="bp">False</span> |
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| 171 | |
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| 172 | <span class="c">## Name of the model</span> |
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| 173 | <span class="bp">self</span><span class="o">.</span><span class="n">name</span> <span class="o">=</span> <span class="s">"SphereSLDModel"</span> |
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| 174 | <span class="c">## Model description</span> |
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| 175 | <span class="bp">self</span><span class="o">.</span><span class="n">description</span> <span class="o">=</span> <span class="s">"""</span> |
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| 176 | <span class="s"> Calculate neutron reflectivity using the Parratt iterative formula</span> |
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| 177 | <span class="s"> Parameters:</span> |
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| 178 | <span class="s"> background:background</span> |
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| 179 | <span class="s"> scale: scale factor</span> |
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| 180 | <span class="s"> sld_core0: the SLD of the substrate</span> |
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| 181 | <span class="s"> sld_solv: the SLD of the incident medium</span> |
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| 182 | <span class="s"> or superstrate</span> |
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| 183 | <span class="s"> sld_flatN: the SLD of the flat region of</span> |
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| 184 | <span class="s"> the N'th layer</span> |
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| 185 | <span class="s"> thick_flatN: the thickness of the flat</span> |
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| 186 | <span class="s"> region of the N'th layer</span> |
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| 187 | <span class="s"> func_interN: the function used to describe</span> |
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| 188 | <span class="s"> the interface of the N'th layer</span> |
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| 189 | <span class="s"> nu_interN: the coefficient for the func_interN</span> |
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| 190 | <span class="s"> thick_interN: the thickness of the interface</span> |
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| 191 | <span class="s"> of the N'th layer</span> |
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| 192 | <span class="s"> Note: the layer number starts to increase</span> |
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| 193 | <span class="s"> from the bottom (substrate) to the top.</span> |
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| 194 | <span class="s"> """</span> |
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| 195 | |
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| 196 | <span class="c">## Parameter details [units, min, max]</span> |
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| 197 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span> <span class="o">=</span> <span class="p">{}</span> |
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| 198 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'n_shells'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
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| 199 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'scale'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
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| 200 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_inter0'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
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| 201 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'func_inter0'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
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| 202 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'sld_core0'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[1/A^(2)]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
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| 203 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'sld_solv'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[1/A^(2)]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
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| 204 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'background'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
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| 205 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'sld_flat1'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[1/A^(2)]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
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| 206 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'sld_flat2'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[1/A^(2)]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
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| 207 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'sld_flat3'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[1/A^(2)]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 208 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'sld_flat4'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[1/A^(2)]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 209 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'sld_flat5'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[1/A^(2)]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
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| 210 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'sld_flat6'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[1/A^(2)]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
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| 211 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'sld_flat7'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[1/A^(2)]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 212 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'sld_flat8'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[1/A^(2)]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
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| 213 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'sld_flat9'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[1/A^(2)]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 214 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'sld_flat10'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[1/A^(2)]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 215 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_inter1'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 216 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_inter2'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 217 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_inter3'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 218 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_inter4'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 219 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_inter5'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 220 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_inter6'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 221 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_inter7'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 222 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_inter8'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 223 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_inter9'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 224 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_inter10'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 225 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_flat1'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 226 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_flat2'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 227 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_flat3'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 228 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_flat4'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 229 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_flat5'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 230 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_flat6'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 231 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_flat7'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 232 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_flat8'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 233 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_flat9'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 234 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'thick_flat10'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 235 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'func_inter1'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 236 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'func_inter2'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 237 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'func_inter3'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 238 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'func_inter4'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 239 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'func_inter5'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 240 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'func_inter6'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 241 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'func_inter7'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 242 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'func_inter8'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 243 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'func_inter9'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 244 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'func_inter10'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 245 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'nu_inter1'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 246 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'nu_inter2'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 247 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'nu_inter3'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 248 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'nu_inter4'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 249 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'nu_inter5'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 250 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'nu_inter6'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 251 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'nu_inter7'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 252 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'nu_inter8'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 253 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'nu_inter9'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 254 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'nu_inter10'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 255 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'npts_inter'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 256 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'nu_inter0'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">''</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 257 | <span class="bp">self</span><span class="o">.</span><span class="n">details</span><span class="p">[</span><span class="s">'rad_core0'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s">'[A]'</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">]</span> |
|---|
| 258 | |
|---|
| 259 | <span class="c">## fittable parameters</span> |
|---|
| 260 | <span class="bp">self</span><span class="o">.</span><span class="n">fixed</span> <span class="o">=</span> <span class="p">[</span><span class="s">'rad_core0.width'</span><span class="p">,</span> |
|---|
| 261 | <span class="s">'thick_inter0.width'</span><span class="p">]</span> |
|---|
| 262 | |
|---|
| 263 | <span class="c">## non-fittable parameters</span> |
|---|
| 264 | <span class="bp">self</span><span class="o">.</span><span class="n">non_fittable</span> <span class="o">=</span> <span class="p">[</span><span class="s">'n_shells'</span><span class="p">,</span> |
|---|
| 265 | <span class="s">'func_inter0'</span><span class="p">,</span> |
|---|
| 266 | <span class="s">'func_inter1'</span><span class="p">,</span> |
|---|
| 267 | <span class="s">'func_inter2'</span><span class="p">,</span> |
|---|
| 268 | <span class="s">'func_inter3'</span><span class="p">,</span> |
|---|
| 269 | <span class="s">'func_inter4'</span><span class="p">,</span> |
|---|
| 270 | <span class="s">'func_inter5'</span><span class="p">,</span> |
|---|
| 271 | <span class="s">'func_inter5'</span><span class="p">,</span> |
|---|
| 272 | <span class="s">'func_inter7'</span><span class="p">,</span> |
|---|
| 273 | <span class="s">'func_inter8'</span><span class="p">,</span> |
|---|
| 274 | <span class="s">'func_inter9'</span><span class="p">,</span> |
|---|
| 275 | <span class="s">'func_inter10'</span><span class="p">]</span> |
|---|
| 276 | |
|---|
| 277 | <span class="c">## parameters with orientation</span> |
|---|
| 278 | <span class="bp">self</span><span class="o">.</span><span class="n">orientation_params</span> <span class="o">=</span> <span class="p">[]</span> |
|---|
| 279 | |
|---|
| 280 | <span class="c">## parameters with magnetism</span> |
|---|
| 281 | <span class="bp">self</span><span class="o">.</span><span class="n">magnetic_params</span> <span class="o">=</span> <span class="p">[]</span> |
|---|
| 282 | |
|---|
| 283 | <span class="bp">self</span><span class="o">.</span><span class="n">category</span> <span class="o">=</span> <span class="bp">None</span> |
|---|
| 284 | <span class="bp">self</span><span class="o">.</span><span class="n">multiplicity_info</span> <span class="o">=</span> <span class="bp">None</span> |
|---|
| 285 | |
|---|
| 286 | <span class="k">def</span> <span class="nf">__setstate__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">state</span><span class="p">):</span> |
|---|
| 287 | <span class="sd">"""</span> |
|---|
| 288 | <span class="sd"> restore the state of a model from pickle</span> |
|---|
| 289 | <span class="sd"> """</span> |
|---|
| 290 | <span class="bp">self</span><span class="o">.</span><span class="n">__dict__</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">dispersion</span> <span class="o">=</span> <span class="n">state</span> |
|---|
| 291 | |
|---|
| 292 | <span class="k">def</span> <span class="nf">__reduce_ex__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">proto</span><span class="p">):</span> |
|---|
| 293 | <span class="sd">"""</span> |
|---|
| 294 | <span class="sd"> Overwrite the __reduce_ex__ of PyTypeObject *type call in the init of </span> |
|---|
| 295 | <span class="sd"> c model.</span> |
|---|
| 296 | <span class="sd"> """</span> |
|---|
| 297 | <span class="n">state</span> <span class="o">=</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">__dict__</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">dispersion</span><span class="p">)</span> |
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| 298 | <span class="k">return</span> <span class="p">(</span><span class="n">create_SphereSLDModel</span><span class="p">,</span> <span class="nb">tuple</span><span class="p">(),</span> <span class="n">state</span><span class="p">,</span> <span class="bp">None</span><span class="p">,</span> <span class="bp">None</span><span class="p">)</span> |
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| 299 | |
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| 300 | <div class="viewcode-block" id="SphereSLDModel.clone"><a class="viewcode-back" href="../../../dev/api/sas.models.html#sas.models.SphereSLDModel.SphereSLDModel.clone">[docs]</a> <span class="k">def</span> <span class="nf">clone</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span> |
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| 301 | <span class="sd">""" Return a identical copy of self """</span> |
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| 302 | <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_clone</span><span class="p">(</span><span class="n">SphereSLDModel</span><span class="p">())</span> |
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| 303 | </div> |
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| 304 | <div class="viewcode-block" id="SphereSLDModel.run"><a class="viewcode-back" href="../../../dev/api/sas.models.html#sas.models.SphereSLDModel.SphereSLDModel.run">[docs]</a> <span class="k">def</span> <span class="nf">run</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">x</span><span class="o">=</span><span class="mf">0.0</span><span class="p">):</span> |
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| 305 | <span class="sd">""" </span> |
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| 306 | <span class="sd"> Evaluate the model</span> |
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| 307 | <span class="sd"> </span> |
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| 308 | <span class="sd"> :param x: input q, or [q,phi]</span> |
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| 309 | <span class="sd"> </span> |
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| 310 | <span class="sd"> :return: scattering function P(q)</span> |
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| 311 | <span class="sd"> </span> |
|---|
| 312 | <span class="sd"> """</span> |
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| 313 | <span class="k">return</span> <span class="n">CSphereSLDModel</span><span class="o">.</span><span class="n">run</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">x</span><span class="p">)</span> |
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| 314 | </div> |
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| 315 | <div class="viewcode-block" id="SphereSLDModel.runXY"><a class="viewcode-back" href="../../../dev/api/sas.models.html#sas.models.SphereSLDModel.SphereSLDModel.runXY">[docs]</a> <span class="k">def</span> <span class="nf">runXY</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">x</span><span class="o">=</span><span class="mf">0.0</span><span class="p">):</span> |
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| 316 | <span class="sd">""" </span> |
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| 317 | <span class="sd"> Evaluate the model in cartesian coordinates</span> |
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| 318 | <span class="sd"> </span> |
|---|
| 319 | <span class="sd"> :param x: input q, or [qx, qy]</span> |
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| 320 | <span class="sd"> </span> |
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| 321 | <span class="sd"> :return: scattering function P(q)</span> |
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| 322 | <span class="sd"> </span> |
|---|
| 323 | <span class="sd"> """</span> |
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| 324 | <span class="k">return</span> <span class="n">CSphereSLDModel</span><span class="o">.</span><span class="n">runXY</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">x</span><span class="p">)</span> |
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| 325 | </div> |
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| 326 | <div class="viewcode-block" id="SphereSLDModel.evalDistribution"><a class="viewcode-back" href="../../../dev/api/sas.models.html#sas.models.SphereSLDModel.SphereSLDModel.evalDistribution">[docs]</a> <span class="k">def</span> <span class="nf">evalDistribution</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">x</span><span class="p">):</span> |
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| 327 | <span class="sd">""" </span> |
|---|
| 328 | <span class="sd"> Evaluate the model in cartesian coordinates</span> |
|---|
| 329 | <span class="sd"> </span> |
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| 330 | <span class="sd"> :param x: input q[], or [qx[], qy[]]</span> |
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| 331 | <span class="sd"> </span> |
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| 332 | <span class="sd"> :return: scattering function P(q[])</span> |
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| 333 | <span class="sd"> </span> |
|---|
| 334 | <span class="sd"> """</span> |
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| 335 | <span class="k">return</span> <span class="n">CSphereSLDModel</span><span class="o">.</span><span class="n">evalDistribution</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">x</span><span class="p">)</span> |
|---|
| 336 | </div> |
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| 337 | <div class="viewcode-block" id="SphereSLDModel.calculate_ER"><a class="viewcode-back" href="../../../dev/api/sas.models.html#sas.models.SphereSLDModel.SphereSLDModel.calculate_ER">[docs]</a> <span class="k">def</span> <span class="nf">calculate_ER</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span> |
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| 338 | <span class="sd">""" </span> |
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| 339 | <span class="sd"> Calculate the effective radius for P(q)*S(q)</span> |
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| 340 | <span class="sd"> </span> |
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| 341 | <span class="sd"> :return: the value of the effective radius</span> |
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| 342 | <span class="sd"> </span> |
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| 343 | <span class="sd"> """</span> |
|---|
| 344 | <span class="k">return</span> <span class="n">CSphereSLDModel</span><span class="o">.</span><span class="n">calculate_ER</span><span class="p">(</span><span class="bp">self</span><span class="p">)</span> |
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| 345 | </div> |
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| 346 | <div class="viewcode-block" id="SphereSLDModel.calculate_VR"><a class="viewcode-back" href="../../../dev/api/sas.models.html#sas.models.SphereSLDModel.SphereSLDModel.calculate_VR">[docs]</a> <span class="k">def</span> <span class="nf">calculate_VR</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span> |
|---|
| 347 | <span class="sd">""" </span> |
|---|
| 348 | <span class="sd"> Calculate the volf ratio for P(q)*S(q)</span> |
|---|
| 349 | <span class="sd"> </span> |
|---|
| 350 | <span class="sd"> :return: the value of the volf ratio</span> |
|---|
| 351 | <span class="sd"> </span> |
|---|
| 352 | <span class="sd"> """</span> |
|---|
| 353 | <span class="k">return</span> <span class="n">CSphereSLDModel</span><span class="o">.</span><span class="n">calculate_VR</span><span class="p">(</span><span class="bp">self</span><span class="p">)</span> |
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| 354 | </div> |
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| 355 | <div class="viewcode-block" id="SphereSLDModel.set_dispersion"><a class="viewcode-back" href="../../../dev/api/sas.models.html#sas.models.SphereSLDModel.SphereSLDModel.set_dispersion">[docs]</a> <span class="k">def</span> <span class="nf">set_dispersion</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">parameter</span><span class="p">,</span> <span class="n">dispersion</span><span class="p">):</span> |
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| 356 | <span class="sd">"""</span> |
|---|
| 357 | <span class="sd"> Set the dispersion object for a model parameter</span> |
|---|
| 358 | <span class="sd"> </span> |
|---|
| 359 | <span class="sd"> :param parameter: name of the parameter [string]</span> |
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| 360 | <span class="sd"> :param dispersion: dispersion object of type DispersionModel</span> |
|---|
| 361 | <span class="sd"> </span> |
|---|
| 362 | <span class="sd"> """</span> |
|---|
| 363 | <span class="k">return</span> <span class="n">CSphereSLDModel</span><span class="o">.</span><span class="n">set_dispersion</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> |
|---|
| 364 | <span class="n">parameter</span><span class="p">,</span> <span class="n">dispersion</span><span class="o">.</span><span class="n">cdisp</span><span class="p">)</span> |
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| 365 | |
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| 366 | |
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| 367 | <span class="c"># End of file</span> |
|---|
| 368 | </pre></div></div></div> |
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