source: sasmodels/sasmodels/models/triaxial_ellipsoid.c @ d42dd4a

core_shell_microgelsmagnetic_modelticket-1257-vesicle-productticket_1156ticket_1265_superballticket_822_more_unit_tests
Last change on this file since d42dd4a was d42dd4a, checked in by pkienzle, 5 years ago

fix compiler warnings for CUDA

  • Property mode set to 100644
File size: 4.0 KB
Line 
1//#define INVALID(v) (v.radius_equat_minor > v.radius_equat_major || v.radius_equat_major > v.radius_polar)
2
3static double
4form_volume(double radius_equat_minor, double radius_equat_major, double radius_polar)
5{
6    return M_4PI_3*radius_equat_minor*radius_equat_major*radius_polar;
7}
8
9static double
10radius_from_volume(double radius_equat_minor, double radius_equat_major, double radius_polar)
11{
12    return cbrt(radius_equat_minor*radius_equat_major*radius_polar);
13}
14
15static double
16radius_from_min_dimension(double radius_equat_minor, double radius_equat_major, double radius_polar)
17{
18    const double rad_equat_min = (radius_equat_minor < radius_equat_major ? radius_equat_minor : radius_equat_major);
19    return (rad_equat_min < radius_polar ? rad_equat_min : radius_polar);
20}
21
22static double
23radius_from_max_dimension(double radius_equat_minor, double radius_equat_major, double radius_polar)
24{
25    const double rad_equat_max = (radius_equat_minor < radius_equat_major ? radius_equat_major : radius_equat_minor);
26    return (rad_equat_max > radius_polar ? rad_equat_max : radius_polar);
27}
28
29static double
30effective_radius(int mode, double radius_equat_minor, double radius_equat_major, double radius_polar)
31{
32    switch (mode) {
33    default:
34    case 1: // equivalent sphere
35        return radius_from_volume(radius_equat_minor,radius_equat_major, radius_polar);
36    case 2: // min radius
37        return radius_from_min_dimension(radius_equat_minor,radius_equat_major, radius_polar);
38    case 3: // max radius
39        return radius_from_max_dimension(radius_equat_minor,radius_equat_major, radius_polar);
40    }
41}
42
43static void
44Fq(double q,
45    double *F1,
46    double *F2,
47    double sld,
48    double sld_solvent,
49    double radius_equat_minor,
50    double radius_equat_major,
51    double radius_polar)
52{
53    const double pa = square(radius_equat_minor/radius_equat_major) - 1.0;
54    const double pc = square(radius_polar/radius_equat_major) - 1.0;
55    // translate a point in [-1,1] to a point in [0, pi/2]
56    const double zm = M_PI_4;
57    const double zb = M_PI_4;
58    double outer_sum_F1 = 0.0;
59    double outer_sum_F2 = 0.0;
60    for (int i=0;i<GAUSS_N;i++) {
61        //const double u = GAUSS_Z[i]*(upper-lower)/2 + (upper + lower)/2;
62        const double phi = GAUSS_Z[i]*zm + zb;
63        const double pa_sinsq_phi = pa*square(sin(phi));
64
65        double inner_sum_F1 = 0.0;
66        double inner_sum_F2 = 0.0;
67        const double um = 0.5;
68        const double ub = 0.5;
69        for (int j=0;j<GAUSS_N;j++) {
70            // translate a point in [-1,1] to a point in [0, 1]
71            const double usq = square(GAUSS_Z[j]*um + ub);
72            const double r = radius_equat_major*sqrt(pa_sinsq_phi*(1.0-usq) + 1.0 + pc*usq);
73            const double fq = sas_3j1x_x(q*r);
74            inner_sum_F1 += GAUSS_W[j] * fq;
75            inner_sum_F2 += GAUSS_W[j] * fq * fq;
76        }
77        outer_sum_F1 += GAUSS_W[i] * inner_sum_F1;  // correcting for dx later
78        outer_sum_F2 += GAUSS_W[i] * inner_sum_F2;  // correcting for dx later
79    }
80    // translate integration ranges from [-1,1] to [lower,upper] and normalize by 4 pi
81    outer_sum_F1 *= 0.25;  // = outer*um*zm*8.0/(4.0*M_PI);
82    outer_sum_F2 *= 0.25;  // = outer*um*zm*8.0/(4.0*M_PI);
83
84    const double volume = form_volume(radius_equat_minor, radius_equat_major, radius_polar);
85    const double contrast = (sld - sld_solvent);
86    *F1 = 1.0e-2 * contrast * volume * outer_sum_F1;
87    *F2 = 1.0e-4 * square(contrast * volume) * outer_sum_F2;
88}
89
90
91static double
92Iqabc(double qa, double qb, double qc,
93    double sld,
94    double sld_solvent,
95    double radius_equat_minor,
96    double radius_equat_major,
97    double radius_polar)
98{
99    const double qr = sqrt(square(radius_equat_minor*qa)
100                           + square(radius_equat_major*qb)
101                           + square(radius_polar*qc));
102    const double fq = sas_3j1x_x(qr);
103    const double vol = form_volume(radius_equat_minor, radius_equat_major, radius_polar);
104    const double drho = (sld - sld_solvent);
105
106    return 1.0e-4 * square(vol * drho * fq);
107}
Note: See TracBrowser for help on using the repository browser.