source: sasmodels/sasmodels/convert.py @ 9a66e65

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Last change on this file since 9a66e65 was 9a66e65, checked in by Paul Kienzle <pkienzle@…>, 8 years ago

refactor sasmodels to sasview parameter conversion

  • Property mode set to 100644
File size: 4.1 KB
Line 
1"""
2Convert models to and from sasview.
3"""
4import warnings
5
6PD_DOT = [
7    ("", ""),
8    ("_pd", ".width"),
9    ("_pd_n", ".npts"),
10    ("_pd_nsigma", ".nsigmas"),
11    ("_pd_type", ".type"),
12    ]
13def _convert_pars(pars, mapping):
14    """
15    Rename the parameters and any associated polydispersity attributes.
16    """
17    newpars = pars.copy()
18    for new, old in mapping.items():
19        if old == new: continue
20        for pd, dot in PD_DOT:
21            if old+dot in newpars:
22                if new is not None:
23                    newpars[new+pd] = pars[old+dot]
24                del newpars[old+dot]
25    return newpars
26
27def _rescale_sld(pars):
28    """
29    rescale all sld parameters in the new model definition by 1e6 so the
30    numbers are nicer.  Relies on the fact that all sld parameters in the
31    new model definition end with sld.
32    """
33    return dict((p, (v*1e6 if p.endswith('sld') else v))
34                for p,v in pars.items())
35
36def convert_model(name, pars):
37    """
38    Convert model from old style parameter names to new style.
39    """
40    _,_ = name,pars # lint
41    raise NotImplementedError
42    # need to load all new models in order to determine old=>new
43    # model name mapping
44
45def _unscale_sld(pars):
46    """
47    rescale all sld parameters in the new model definition by 1e6 so the
48    numbers are nicer.  Relies on the fact that all sld parameters in the
49    new model definition end with sld.
50    """
51    return dict((p, (v*1e-6 if p.endswith('sld') else v))
52                for p,v in pars.items())
53
54def _remove_pd(pars, key, name):
55    """
56    Remove polydispersity from the parameter list.
57
58    Note: operates in place
59    """
60    # Bumps style parameter names
61    pd = pars.pop(key+".width", 0.0)
62    pd_n = pars.pop(key+".npts", 0)
63    if pd != 0.0 and pd_n != 0:
64        warnings.warn("parameter %s not polydisperse in sasview %s"%(key, name))
65    pars.pop(key+".nsigmas", None)
66    pars.pop(key+".type", None)
67    return pars
68
69def _revert_pars(pars, mapping):
70    """
71    Rename the parameters and any associated polydispersity attributes.
72    """
73    newpars = pars.copy()
74    for new, old in mapping.items():
75        for pd, dot in PD_DOT:
76            if old+pd == new+dot:
77                continue
78            if new+pd in newpars:
79                if old is not None:
80                    newpars[old+dot] = pars[new+pd]
81                del newpars[new+pd]
82    return newpars
83
84def revert_model(model_definition, pars):
85    """
86    Convert model from new style parameter names to old style.
87    """
88    mapping = model_definition.oldpars
89    oldname = model_definition.oldname
90    oldpars = _revert_pars(_unscale_sld(pars), mapping)
91
92    # Note: update compare.constrain_pars to match
93    name = model_definition.name
94    if name in ('teubner_strey', 'broad_peak'):
95        if oldpars.pop('scale', 1.0) != 1.0:
96            warnings.warn("parameter scale not used in sasview %s"%name)
97    elif name in ('guinier',):
98        if oldpars.pop('background', 0.0) != 0.0:
99            warnings.warn("parameter background not used in sasview %s"%name)
100    elif getattr(model_definition, 'category', None) == 'structure-factor':
101        if oldpars.pop('scale', 1.0) != 1.0:
102            warnings.warn("parameter scale not used in sasview %s"%name)
103        if oldpars.pop('background', 0.0) != 0.0:
104            warnings.warn("parameter background not used in sasview %s"%name)
105    elif name == 'pearl_necklace':
106        _remove_pd(oldpars, 'num_pearls', name)
107        _remove_pd(oldpars, 'thick_string', name)
108
109    return oldname, oldpars
110
111def constrain_new_to_old(model_definition, pars):
112    """
113    Restrict parameter values to those that will match sasview.
114    """
115    # Note: update convert.revert_model to match
116    name = model_definition.name
117    if name in ('teubner_strey','broad_peak'):
118        pars['scale'] = 1
119    elif name in ('guinier',):
120        pars['background'] = 0
121    elif name == 'pearl_necklace':
122        pars['string_thickness_pd_n'] = 0
123        pars['number_of_pearls_pd_n'] = 0
124    elif getattr(model_definition, 'category', None) == 'structure-factor':
125        pars['scale'], pars['background'] = 1, 0
126
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