source: sasmodels/sasmodels/convert.py @ 716abe0

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Last change on this file since 716abe0 was 716abe0, checked in by Paul Kienzle <pkienzle@…>, 8 years ago

fix refactored conversion function

  • Property mode set to 100644
File size: 4.3 KB
Line 
1"""
2Convert models to and from sasview.
3"""
4import warnings
5
6PD_DOT = [
7    ("", ""),
8    ("_pd", ".width"),
9    ("_pd_n", ".npts"),
10    ("_pd_nsigma", ".nsigmas"),
11    ("_pd_type", ".type"),
12    ]
13def _convert_pars(pars, mapping):
14    """
15    Rename the parameters and any associated polydispersity attributes.
16    """
17    newpars = pars.copy()
18    for new, old in mapping.items():
19        if old == new: continue
20        for pd, dot in PD_DOT:
21            if old+dot in newpars:
22                if new is not None:
23                    newpars[new+pd] = pars[old+dot]
24                del newpars[old+dot]
25    return newpars
26
27def _rescale_sld(pars):
28    """
29    rescale all sld parameters in the new model definition by 1e6 so the
30    numbers are nicer.  Relies on the fact that all sld parameters in the
31    new model definition end with sld.
32    """
33    return dict((p, (v*1e6 if p.endswith('sld') else v))
34                for p,v in pars.items())
35
36def convert_model(name, pars):
37    """
38    Convert model from old style parameter names to new style.
39    """
40    _,_ = name,pars # lint
41    raise NotImplementedError
42    # need to load all new models in order to determine old=>new
43    # model name mapping
44
45def _unscale_sld(pars):
46    """
47    rescale all sld parameters in the new model definition by 1e6 so the
48    numbers are nicer.  Relies on the fact that all sld parameters in the
49    new model definition end with sld.
50    """
51    return dict((p, (v*1e-6 if p.endswith('sld') else v))
52                for p,v in pars.items())
53
54def _remove_pd(pars, key, name):
55    """
56    Remove polydispersity from the parameter list.
57
58    Note: operates in place
59    """
60    # Bumps style parameter names
61    pd = pars.pop(key+".width", 0.0)
62    pd_n = pars.pop(key+".npts", 0)
63    if pd != 0.0 and pd_n != 0:
64        warnings.warn("parameter %s not polydisperse in sasview %s"%(key, name))
65    pars.pop(key+".nsigmas", None)
66    pars.pop(key+".type", None)
67    return pars
68
69def _revert_pars(pars, mapping):
70    """
71    Rename the parameters and any associated polydispersity attributes.
72    """
73    newpars = pars.copy()
74
75    for new, old in mapping.items():
76        for pd, dot in PD_DOT:
77            if old+pd == new+dot:
78                continue
79            if new+pd in newpars:
80                if old is not None:
81                    newpars[old+dot] = pars[new+pd]
82                del newpars[new+pd]
83    for k in list(newpars.keys()):
84        for pd, dot in PD_DOT[1:]:  # skip "" => ""
85            if k.endswith(pd):
86                newpars[k[:-len(pd)]+dot] = newpars[k]
87                del newpars[k]
88    return newpars
89
90def revert_model(model_definition, pars):
91    """
92    Convert model from new style parameter names to old style.
93    """
94    mapping = model_definition.oldpars
95    oldname = model_definition.oldname
96    oldpars = _revert_pars(_unscale_sld(pars), mapping)
97
98    # Note: update compare.constrain_pars to match
99    name = model_definition.name
100    if name in ('teubner_strey', 'broad_peak'):
101        if oldpars.pop('scale', 1.0) != 1.0:
102            warnings.warn("parameter scale not used in sasview %s"%name)
103    elif name in ('guinier',):
104        if oldpars.pop('background', 0.0) != 0.0:
105            warnings.warn("parameter background not used in sasview %s"%name)
106    elif getattr(model_definition, 'category', None) == 'structure-factor':
107        if oldpars.pop('scale', 1.0) != 1.0:
108            warnings.warn("parameter scale not used in sasview %s"%name)
109        if oldpars.pop('background', 0.0) != 0.0:
110            warnings.warn("parameter background not used in sasview %s"%name)
111    elif name == 'pearl_necklace':
112        _remove_pd(oldpars, 'num_pearls', name)
113        _remove_pd(oldpars, 'thick_string', name)
114
115    return oldname, oldpars
116
117def constrain_new_to_old(model_definition, pars):
118    """
119    Restrict parameter values to those that will match sasview.
120    """
121    # Note: update convert.revert_model to match
122    name = model_definition.name
123    if name in ('teubner_strey','broad_peak'):
124        pars['scale'] = 1
125    elif name in ('guinier',):
126        pars['background'] = 0
127    elif name == 'pearl_necklace':
128        pars['string_thickness_pd_n'] = 0
129        pars['number_of_pearls_pd_n'] = 0
130    elif getattr(model_definition, 'category', None) == 'structure-factor':
131        pars['scale'], pars['background'] = 1, 0
132
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