#!/usr/bin/env python # -*- coding: utf-8 -*- from sasmodel import SasModel, load_data, set_beam_stop, plot_data, tic, toc import numpy as np def sasview_model(modelname, **pars): modelname = modelname+"Model" sans = __import__('sans.models.'+modelname) ModelClass = getattr(getattr(sans.models,modelname,None),modelname,None) if ModelClass is None: raise ValueError("could not find model %r in sans.models"%modelname) model = ModelClass() for k,v in pars.items(): if k.endswith("_pd"): model.dispersion[k[:-3]]['width'] = v elif k.endswith("_pd_n"): model.dispersion[k[:-5]]['npts'] = v elif k.endswith("_pd_nsigma"): model.dispersion[k[:-10]]['nsigmas'] = v else: model.setParam(k, v) return model def sasview_eval(model, data): theory = model.evalDistribution([data.qx_data, data.qy_data]) return theory def plot(data, cpumodel, gpumodel, N, pars): model = SasModel(data, gpumodel, dtype='f', **pars) tic() for i in range(N): #pars['scale'] = np.random.rand() model.update() gpu = model.theory() gpu_time = toc()*1000./N print "ocl t=%.1f ms"%gpu_time tic() for i in range(N): cpu = sasview_eval(cpumodel, data) cpu_time = toc()*1000./N print "omp t=%.1f ms"%cpu_time import matplotlib.pyplot as plt print "gpu/cpu", max(gpu/cpu) cpu *= max(gpu/cpu) relerr = (gpu - cpu)/cpu print "max(|(ocl-omp)/ocl|)", max(abs(relerr)) plt.subplot(131); plot_data(data, cpu); plt.title("omp t=%.1f ms"%cpu_time) plt.subplot(132); plot_data(data, gpu); plt.title("ocl t=%.1f ms"%gpu_time) plt.subplot(133); plot_data(data, relerr); plt.title("relerr x 10^8"); plt.colorbar() plt.show() def newlen(N): import sys if len(sys.argv) > 1: N = int(sys.argv[1]) data = load_data('December/DEC07098.DAT') set_beam_stop(data, 0.004) return data, N def cyl(N=1): dtype = "float" pars = dict( scale=.003, radius=64.1, length=66.96, sldCyl=.291e-6, sldSolv=5.77e-6, background=.1, cyl_theta=90, cyl_phi=0, radius_pd=0.1, radius_pd_n=10, radius_pd_nsigma=3, length_pd=0.1,length_pd_n=5, length_pd_nsigma=3, cyl_theta_pd=0.1, cyl_theta_pd_n=5, cyl_theta_pd_nsigma=3, cyl_phi_pd=0.1, cyl_phi_pd_n=10, cyl_phi_pd_nsigma=3) from Models.code_cylinder_f import GpuCylinder as gpumodel model = sasview_model('Cylinder', **pars) data, N = newlen(N) plot(data, model, gpumodel, N, pars) def ellipse(N=1): pars = dict(scale=.027, radius_a=60, radius_b=180, sldEll=.297e-6, sldSolv=5.773e-6, background=4.9, axis_theta=0, axis_phi=90, radius_a_pd=0.1, radius_a_pd_n=10, radius_a_pd_nsigma=3, radius_b_pd=0.1, radius_b_pd_n=10, radius_b_pd_nsigma=3, axis_theta_pd=0.1, axis_theta_pd_n=6, axis_theta_pd_nsigma=3, axis_phi_pd=0.1, axis_phi_pd_n=6, axis_phi_pd_nsigma=3,) from Models.code_ellipse import GpuEllipse as gpumodel model = sasview_model('Ellipsoid', **pars) data, N = newlen(N) plot(data, model, gpumodel, N, pars) def coreshell(N=1): data, N = newlen(N) pars = dict(scale= 1.77881e-06, radius=325, thickness=25, length=34.2709, core_sld=1e-6, shell_sld=.291e-6, solvent_sld=7.105e-6, background=223.827, axis_theta=90, axis_phi=0, axis_theta_pd=15.8, radius_pd=0.1, radius_pd_n=10, radius_pd_nsigma=3, length_pd=0.1, length_pd_n=10, length_pd_nsigma=3, thickness_pd=0.1, thickness_pd_n=5, thickness_pd_nsigma=3, axis_theta_pd_n=20, axis_theta_pd_nsigma=5, axis_phi_pd=0.0008748, axis_phi_pd_n=5, axis_phi_pd_nsigma=3,) model = sasview_model('CoreShellCylinder', **pars) from Models.code_coreshellcyl_f import GpuCoreShellCylinder as gpumodel plot(data, model, gpumodel, N, pars) def trellipse(N=1): data, N = newlen(N) pars = dict(scale=0.08, semi_axisA=15, semi_axisB=20, semi_axisC=500, sldEll=7.105e-6, sldSolv=.291e-6, background=5, axis_theta=0, axis_phi=0, axis_psi=0, axis_theta_pd=20, axis_theta_pd_n=10, axis_theta_pd_nsigma=3, axis_phi_pd=.1, axis_phi_pd_n=10, axis_phi_pd_nsigma=3, axis_psi_pd=30, axis_psi_pd_n=5, axis_psi_pd_nsigma=3, semi_axisA_pd=.1, semi_axisA_pd_n=5, semi_axisA_pd_nsigma=3, semi_axisB_pd=.1, semi_axisB_pd_n=5, semi_axisB_pd_nsigma=3, semi_axisC_pd=.1, semi_axisC_pd_n=5, semi_axisC_pd_nsigma=3,) model = sasview_model('TriaxialEllipsoid', **pars) from Models.code_triaxialellipse import GpuTriEllipse as gpumodel plot(data, model, gpumodel, N, pars) def lamellar(N=1): data, N = newlen(N) pars = dict(scale=0.08, bi_thick=19.2946, sld_bi=5.38e-6,sld_sol=7.105e-6, background=0.003, bi_thick_pd= 0.37765, bi_thick_pd_n=40, bi_thick_pd_nsigma=3) model = sasview_model('Lamellar', **pars) from Models.code_lamellar import GpuLamellar as gpumodel plot(data, model, gpumodel, N, pars) def cap(N=1): data, N = newlen(N) pars = dict(scale=.08, rad_cyl=20, rad_cap=40, len_cyl=400, sld_capcyl=1e-6, sld_solv=6.3e-6, background=0, theta=0, phi=0, rad_cyl_pd=.1, rad_cyl_pd_n=10, rad_cyl_pd_nsigma=3, rad_cap_pd=.1, rad_cap_pd_n=10, rad_cap_pd_nsigma=3, len_cyl_pd=.1, len_cyl_pd_n=3, len_cyl_pd_nsigma=3, theta_pd=.1, theta_pd_n=3, theta_pd_nsigma=3, phi_pd=.1, phi_pd_n=3, phi_pd_nsigma=3) model = sasview_model('CappedCylinder', **pars) from Models.code_capcyl import GpuCapCylinder as gpumodel plot(data, model, gpumodel, N, pars) if __name__ == "__main__": coreshell(1)